Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11705
- Subject:
- XM_011541074.3
- Aligned Length:
- 2967
- Identities:
- 613
- Gaps:
- 2331
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGACCAACACCAAAGACCCCAAAAGAGCCATGGAATCCACGCTGGCGACATCCAATTCTGCCACAGGCCCCGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CACCTTCTCCCACGTCTTTGGTCAGCAGTGCCAACTTATGCAAGCAGCTGTGCAATCATTGCACACCCTCAATG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACCAGATTTCCCATTTTATTGTCACCAAGTCGAAGGCACTGGAGGAGGACAAAGACCCTTTTCTACCCACTGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAGGAGACTCTGAAGAGTTCCATGATATTGATGAGGCACCTCTTAATGGATGCTCAGGCCAAAATCCTGAGCAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GATGGAAGACAATAAGCAGCTCGCGCTCCGCATCGATGGGGCGGTCCAGTCGGCCAGCCAGGAGGTGACCAACC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCGAGCCGAACTCACGGCCACCAACCGGAGACTGGCGGAACTGAGCGGCGGCGGCGGCCCCGGCCCGGGCCCG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGAGCCGCGGCCAGCGCCTCGGCGGCGGGGGACTCGGCGGCGACGAACATGGAGAACCCCCAGCTTGGAGCGCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGTGCTCCTGCGGGAAGAAGTGTCGCGGCTCCAGGAGGAAGTTCACCTTCTCCGGCAGATGAAGGAGATGTTGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CGAAGGACCTGGAGGAGTCGCAGGGCGGCAAGTCCTCTGAGGTCCTCTCGGCCACCGAGCTCAGGGTCCAGCTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCCCAGAAGGAGCAGGAGCTAGCCAGAGCCAAAGAAGCCTTGCAGGCCATGAAAGCTGATCGGAAGCGCTTAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGGCGAGAAGACAGACCTGGTGAGCCAGATGCAGCAGCTGTATGCCACACTGGAGAGCCGCGAGGAGCAGCTCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAGACTTCATCCGCAACTATGAGCAGCACCGCAAGGAGAGCGAGGATGCGGTCAAAGCGCTGGCCAAGGAGAAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GACCTGCTGGAGCGTGAGAAGTGGGAGCTGCGGCGCCAAGCCAAGGAGGCCACAGACCACGCCACGGCACTGCG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTCCCAGCTGGACCTCAAGGACAACCGGATGAAGGAGCTGGAGGCCGAGCTGGCCATGGCCAAACAGTCCTTAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTACGCTGACCAAGGACGTCCCCAAGCGGCATTCCCTCGCCATGCCGGGCGAGACGGTGCTCAATGGCAACCAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAGTGGGTGGTGCAGGCGGACCTCCCGCTGACCGCAGCCATCCGGCAGAGTCAACAGACTCTCTACCACTCACA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCCCCCTCACCCTGCGGACCGGCAAGCGGTCAGGGTGAGCCCCTGCCACTCCCGGCAGCCCTCTGTCATCTCCG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACGCATCTGCCGCCGAAGGCGACCGGTCGTCCACACCGAGCGACATCAACTCCCCTCGACACCGGACACACTCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTCTGCAACGGCGACAGTCCCGGCCCAGTTCAGAAGAACCTGCACAACCCTATTGTACAGTCACTAGAGGATCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGAAGACCAAAAACGGAAAAAGAAGAAAGAGAAGATGGGATTCGGCTCCATCTCCCGCGTCTTCGCCAGAGGGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGCAGCGGAAGTCCCTCGACCCCGGCCTCTTTGATGACTCGGACAGCCAGTGCAGCCCCACGCGGCAGAGCCTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGCCTGTCGGAAGGCGAGGAGCAGATGGACCGGCTGCAGCAGGTGGAGCTGGTGAGGACCACCCCTATGTCCCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTGGAAGGCGGGCACCGTCCAGGCCTGGCTGGAGGTGGTGATGGCCATGCCTATGTACGTCAAGGCCTGCACGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGAACGTGAAGAGCGGGAAGGTGCTGCTGAGCCTGAGTGACGAGGACCTGCAGCTGGGCCTTGGGGTGTGCAGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TCCCTGCACCGGCGCAAGCTGCGCCTGGCCATCGAGGACTACCGTGATGCCGAGGCAGGCCGCAGCCTGTCCAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGCTGCCGAGCTGGACCATCACTGGGTGGCCAAGGCCTGGCTGAATGACATTGGCCTGTCCCAGTACTCCCAGG 1924
Query 1 -----------------------------ATGCTGAATTCCCTGATGAAGCGAGACCTGGAGAAGCACCTGAAC 45
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CCTTTCAGAACCACCTGGTTGATGGGCGGATGCTGAATTCCCTGATGAAGCGAGACCTGGAGAAGCACCTGAAC 1998
Query 46 GTGTCCAAGAAGTTCCACCAGGTCAGCATCCTGCTGGGGATCGAGCTGCTGTACCAAGTGAACTTCAGCAGGGA 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GTGTCCAAGAAGTTCCACCAGGTCAGCATCCTGCTGGGGATCGAGCTGCTGTACCAAGTGAACTTCAGCAGGGA 2072
Query 120 GGCCCTCCAGGAGCGCCGGGCCCGCTGCGAGACGCAGAACATTGACCCCGTGGTGTGGACCAACCAGCGGGTGC 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GGCCCTCCAGGAGCGCCGGGCCCGCTGCGAGACGCAGAACATTGACCCCGTGGTGTGGACCAACCAGCGGGTGC 2146
Query 194 TCAAGTGGGTTCGAGACATCGACCTGAAGGAGTACGCAGACAACCTGACCAACAGCGGCGTCCATGGTGCTGTG 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 TCAAGTGGGTTCGAGACATCGACCTGAAGGAGTACGCAGACAACCTGACCAACAGCGGCGTCCATGGTGCTGTG 2220
Query 268 CTGGTGCTGGAGCCCACATTCAATGCCGAGGCCATGGCCACTGCCCTGGGCATCCCCAGTGGGAAGCACATCCT 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 CTGGTGCTGGAGCCCACATTCAATGCCGAGGCCATGGCCACTGCCCTGGGCATCCCCAGTGGGAAGCACATCCT 2294
Query 342 CCGGAGACACCTGGCAGAGGAGATGAGCGCCGTCTTCCACCCAGCCAACTCCACAGGCATCCGGGAGGCTGAGC 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CCGGAGACACCTGGCAGAGGAGATGAGCGCCGTCTTCCACCCAGCCAACTCCACAGGCATCCGGGAGGCTGAGC 2368
Query 416 GTTTTGGAACGCCCCCTGGCAGGGCCTCCAGCGTCACGCGGACAGGAAAGGAGGAGAACAGCAGCGGTCTCAAG 489
|||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 2369 GTTTTGGAACGCCCCCTGGCAGGGCCTCCAGCGTCACGCGGGCAGGAAAGGAGGAGAACAGCAGCGGTCTCAAG 2442
Query 490 TACAAGGCTGGCCGG-------------------------------CTGC---CCCTGGGGAAGAT-------- 521
||||||||||||||| |||| ||| |||.|||.|
Sbjct 2443 TACAAGGCTGGCCGGGTAAGTCTCTCAATGGATTTACCTGTGAGTCCTGCAGACCC-GGGAAAGGTCTTTTTTT 2515
Query 522 -----------AG-------------------------GAA------------------------GGGGCTTCA 535
|| ||| |||||.||
Sbjct 2516 CTCCTCCCGGGAGCTCTGTGGCTCCTGTGCTGGCCTGTGAAGGTGGAGTGCCAGGCCGGGTCACGGGGGCATC- 2588
Query 536 GCAGCAAAGATCCC---GAT-----TTCCATGATGACTATGGCTCTCTTCAAAACGAAGATTGCGG---AG--- 595
|||.|.||||.|| ||| |||.|.|| || |||| ||||.|.||..|| ||
Sbjct 2589 -CAGGACAGATGCCCTGGATGTACCTTCAAGGA--AC---------CTTC---ACGATGCTTTGGGTACAGTGC 2647
Query 596 ACGATGACCCCCAGAGCAGG--------------CTGGA----ACAGTGC-CGTCTGGAAGGCTACAACAGCCT 650
||.|.|.|||| ||||| ||||| |.||||| .|||| ||.|.||||
Sbjct 2648 ACAAAGCCCCC----GCAGGGCTTCGAGTAGCACCTGGATCTCAAAGTGCAGGTCT---------CACCTGCCT 2708
Query 651 GGAGG----TCACC--------------AACGTG---------------------------------------- 666
|.|.| ||||| |||.||
Sbjct 2709 GCATGAGAATCACCTGGGGCTATTACTGAACTTGCAGATTCTGGGACCCACCTTGGTCTCCTGGAAAAGGAGTT 2782
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2783 CTCTGGGGCGAGGGGGATCCTGCATTCAGCTAGGCTGCCCAGAGGGTTCCGGCGCAGCCCCAAACTCTGAGCCC 2856
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2857 CAATCACTGATTTCAATTTGCGACTTCAGTGACCTGACCAATAGCAAAGATGAACCCTCTGGTGACTCCAACCA 2930
Query 667 ------- 666
Sbjct 2931 AACAGTA 2937
