Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11752
- Subject:
- XR_374108.3
- Aligned Length:
- 1705
- Identities:
- 767
- Gaps:
- 828
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAGAGGACAGGCGACCGGGTGGGGAACAGGGTGCGGCTTCGCGCTTCCGGTGCCCAGCTTCCGGCTCCGGGTTT 74
Query 1 -----------------------------------------------------ATGGCCTCGCGCTGGTGGCGG 21
|||||...||||||||.|.|.
Sbjct 75 GGGCTTGGGGCAGAGGCGGAGCTACGGCCCGCCGCGACTTTCAGACTTGAACCATGGCTATGCGCTGGTCGTGC 148
Query 22 TGGCGGCGCGGCTGCTCCTGGAAGCCG---GCGG-CGCGGAGCCC----CGGGCCCGGCTCCCCCGGCCGTGCG 87
||||||||.|||||||||||||.|||| |||| || ||||||| ||||..|| .||.|||.|||.|
Sbjct 149 TGGCGGCGTGGCTGCTCCTGGAGGCCGACCGCGGTCG-GGAGCCCGCGGCGGGAACG----ACCTGGCTGTGTG 217
Query 88 GTACCGTTGGGGCCGAGCGCCGCTGCCGAAGTCCGCGCGCAGGTTCATAGGCGGAAGGGACTTGACTTGTCTCA 161
|..||..|.||..|..|.|||||..|.||...||||||| ||
Sbjct 218 GAGCCTCTCGGAACACGTGCCGCCTCGGACACCCGCGCG---------------------------------CA 258
Query 162 GATACCCTATATTAATCTTGTGAAGCATTTAACATCTGCCTGTCCAAATGTATG--TCGTATATCACGGTTTCA 233
||||||||||.|||.||||.|||||..|||||..|||||||..|||| .|||| |.|||||||||.||||||
Sbjct 259 GATACCCTATTTTAGTCTTATGAAGATTTTAATGTCTGCCTCCCCAA--CTATGCATAGTATATCACAGTTTCA 330
Query 234 TCACACAACCCCAGACA-------------GTAAAACACACAGTGGTGAAAAATACACCGATCCTTTCAAACTC 294
|||.|..||.|||| || ||.||||.||.||||||||.|||||||..||||||||.|||||.
Sbjct 331 TCAAAGGACACCAG-CAATGTGCAGTTGTCGTCAAACTCAGAGTGGTGAGAAATACAGTGATCCTTTTAAACTT 403
Query 295 GGTTGGAGAGACTTGAAAGGTCTGTATGAGGACATTAGAAAGGAACTGCTTATATCAACATCAGAACTTAAGGA 368
||.||||||||||||||||||||||||||.||||||||||||||.||||..||.||.||...||||||.|||||
Sbjct 404 GGCTGGAGAGACTTGAAAGGTCTGTATGAAGACATTAGAAAGGAGCTGCACATCTCCACCAGAGAACTAAAGGA 477
Query 369 AATGTCTGAGTACTACTTTGATGGGAAAGGGAAAGCCTTTCGACCAATTATTGTGGCGCTAATGGCCCGAGCAT 442
.|||||.||.||||||||.|||||.|||||.|||||||||.||||.||||||||||.|||||||||||||||.|
Sbjct 478 CATGTCCGAATACTACTTCGATGGCAAAGGAAAAGCCTTTAGACCGATTATTGTGGTGCTAATGGCCCGAGCGT 551
Query 443 GCAATATTCATCATAACAACTCCCGACATGTGCAAGCCAGCCAGCGCGCCATAGCCTTAATTGCAGAAATGATC 516
|.||||||||||||||.||..|||||.|..|||||||||||||||||.|||||||||||.||||||||||||||
Sbjct 552 GTAATATTCATCATAATAATGCCCGAGAGATGCAAGCCAGCCAGCGCTCCATAGCCTTAGTTGCAGAAATGATC 625
Query 517 CACACTGCTAGTCTGGTTCACGATGACGTTATTGACGATGCAAGTTCTCGAAGAGGAAAACACACAGTTAATAA 590
||||||||||.|||||||||.||||||||||||||.||||||||||||||||||||||||||.|||||||||||
Sbjct 626 CACACTGCTACTCTGGTTCATGATGACGTTATTGATGATGCAAGTTCTCGAAGAGGAAAACATACAGTTAATAA 699
Query 591 GATCTGGGGTGAAAAGAAGGCTGTTCTTGCTGGAGATTTAATTCTTTCTGCAGCATCTATAGCTCTGGCACGAA 664
.|||||||||||.||.||||||||||||||||||||||||||||||||||||||.|||.|||||||||||||.|
Sbjct 700 AATCTGGGGTGAGAAAAAGGCTGTTCTTGCTGGAGATTTAATTCTTTCTGCAGCGTCTGTAGCTCTGGCACGGA 773
Query 665 TTGGAAATACAACTGTTATATCTATTTTAACCCAAGTTATTGAAGATTTGGTGCGTGGTGAATTTCTTCAGCTC 738
|||||||.|||.|||||.|||||||.|||.|||||||||||||||||||||||||||||||||||||||||||.
Sbjct 774 TTGGAAACACAGCTGTTGTATCTATGTTAGCCCAAGTTATTGAAGATTTGGTGCGTGGTGAATTTCTTCAGCTA 847
Query 739 GGGTCAAAAGAAAATGAGAATGAAAGATTTGCACACTACCTTGAGAAGACATTCAAGAAGACCGCCAGCCTGAT 812
||||||||||||||||||||||||||.|||||.|||||||||||||||||.|||||||||||.|||||||||||
Sbjct 848 GGGTCAAAAGAAAATGAGAATGAAAGGTTTGCCCACTACCTTGAGAAGACCTTCAAGAAGACAGCCAGCCTGAT 921
Query 813 AGCCAACAGTTGTAAAGCAGTAT--------------------------------------------------- 835
|||||||||||||||||||||||
Sbjct 922 AGCCAACAGTTGTAAAGCAGTATGTCTCTGTCCTGGGTTGCCCTGACCCAGTGGTGCATGAGATAGCCTATCAG 995
Query 836 -------------------------------------------------------------------------- 835
Sbjct 996 TATGGGAAAAATGTTGGAATAGCTTTTCAGCTCATAGATGATGTATTGGATTTCACCTCATGTTCTGACCAGAT 1069
Query 836 ----------------------------------------------------------------------TTCC 839
||||
Sbjct 1070 GGGCAAGCCAACATCTGCAGACCTGAAGCTAGGCATAGCCACTGGCCCTGTCTTGTTTGCTTGCCAGCAGTTCC 1143
Query 840 CAGAAATGAATGCTATGATCATGCGACGGTTCAGTTTGCCTGGAGATGTAGACAGAGCTCGACAGTATGTACTA 913
|||||||||||||||||||.|||.||||||||||||||||.||||||||.||||||||.||||||||||||.||
Sbjct 1144 CAGAAATGAATGCTATGATAATGAGACGGTTCAGTTTGCCAGGAGATGTGGACAGAGCACGACAGTATGTATTA 1217
Query 914 CAGAG--------------------------------------------------------------------- 918
|||||
Sbjct 1218 CAGAGTGATGGCGTGCAGCAAACAACCTACCTCGCCCAGCAGTACTGCCACAAAGCTGTGAGAGAGATCAGGAA 1291
Query 919 -------------------------------------------------------------------------- 918
Sbjct 1292 GCTTAGACCATCTACAGAAAGGGACGCCCTCATTCAGCTTTCAGAAAGTGTGCTCACCAGAGATAAATGACAAT 1365
Query 919 -------------------------------------------------------------------------- 918
Sbjct 1366 TCCTCCTCTTCTTTCTGGCAGCTATTTTACCAGACTGTGCCTAATGATTTTGTGAAACACTATTTGCTTCATGT 1439
Query 919 -------------------------------------------------------------------------- 918
Sbjct 1440 GCAGAAAACCAAAAATCATTTTAAGAAATAATTTCAACCTTATTGATGGGCAATTTTTATTGGCAAAGTTTTTC 1513
Query 919 -------------------------------------------------------------------------- 918
Sbjct 1514 GGAAAACTTTTTAAATGTAATTAAACCAGTGTCATTATAGTCCTATAAATTCTAATCGAGGTATCCTGATGGTT 1587
Query 919 -------------------------------------------------------------------------- 918
Sbjct 1588 ATATGTGGTATTGTTTACACTGTTAATGCCCACATGTAAAGCCATTACACAAATAAATAATCAACGTTAAAATT 1661
Query 919 --- 918
Sbjct 1662 CAA 1664
