Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11752
- Subject:
- XR_428636.4
- Aligned Length:
- 2313
- Identities:
- 917
- Gaps:
- 1395
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATAGGAGGCTCGCCCCGGGGAAGGTTACGCTCGGGGTCCCCAGACCAGGTCTCCGCACGCCCCTGCCCCGTCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCCCGGGAGCGGCTGCAGTCCCCGTTGGCTGCAGACGGGCAGACACCCGAAGTGTCCGCGCCGGCAGCCGGAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGCAAGCGAGGAAGAGCGAACCGCGCTCCCGGGCCTGGCCGAAGCGCTTCCTGTGCCAGGTTTCCGGCTCCGGG 222
Query 1 ------------------------------------------------------------------ATGGCCTC 8
||||||||
Sbjct 223 TCCCGGGAGGAGGATCGCGGGCCAGAGGCGGAGCCGCCGCCCTGCCGCGACTTTCAGACTCCGACCATGGCCTC 296
Query 9 GCGCTGGTGGCGGTGGCGGCGCGGCTGCTCCTGGAAGCCGGCGGCGCGGAGCCCCGGGCCCGGCTCCCCCGGCC 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GCGCTGGTGGCGGTGGCGGCGCGGCTGCTCCTGGAAGCCGGCGGCGCGGAGCCCCGGGCCCGGCTCCCCCGGCC 370
Query 83 GTGCGGTACCGTTGGGGCCGAGCGCCGCTGCCGAAGTCCGCGCGCAGGTTCATAGGCGGAAGGGACTTGACTTG 156
||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GTGCGGGACCGTTGGGGCCGAGCGCCGCTGCCGAAGTCCGCGCGCAGGTTCATAGGCGGAAGGGACTTGACTTG 444
Query 157 TCTCAGATACCCTATATTAATCTTGTGAAGCATTTAACATCTGCCTGTCCAAATGTATGTCGTATATCACGGTT 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCTCAGATACCCTATATTAATCTTGTGAAGCATTTAACATCTGCCTGTCCAAATGTATGTCGTATATCACGGTT 518
Query 231 TCATCACACAACCCCAGACAGTAAAACACACAGTGGTGAAAAATACACCGATCCTTTCAAACTCGGTTGGAGAG 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCATCACACAACCCCAGACAGTAAAACACACAGTGGTGAAAAATACACCGATCCTTTCAAACTCGGTTGGAGAG 592
Query 305 ACTTGAAAGGTCTGTATGAGGACATTAGAAAGGAACTGCTTATATCAACATCAGAACTTAAGGAAATGTCTGAG 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ACTTGAAAGGTCTGTATGAGGACATTAGAAAGGAACTGCTTATATCAACATCAGAACTTAAGGAAATGTCTGAG 666
Query 379 TACTACTTTGATGGGAAAGGGAAAGCCTTTCGACCAATTATTGTGGCGCTAATGGCCCGAGCATGCAATATTCA 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TACTACTTTGATGGGAAAGGGAAAGCCTTTCGACCAATTATTGTGGCGCTAATGGCCCGAGCATGCAATATTCA 740
Query 453 TCATAACAACTCCCGACATGTGCAAGCCAGCCAGCGCGCCATAGCCTTAATTGCAGAAATGATCCACACTGCTA 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TCATAACAACTCCCGACATGTGCAAGCCAGCCAGCGCGCCATAGCCTTAATTGCAGAAATGATCCACACTGCTA 814
Query 527 GTCTGGTTCACGATGACGTTATTGACGATGCAAGTTCTCGAAGAGGAAAACACACAGTTAATAAGATCTGGGGT 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GTCTGGTTCACGATGACGTTATTGACGATGCAAGTTCTCGAAGAGGAAAACACACAGTTAATAAGATCTGGGGT 888
Query 601 GAAAAGAAGGCTGTTCTTGCTGGAGATTTAATTCTTTCTGCAGCATCTATAGCTCTGGCACGAATTGGAAATAC 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GAAAAGAAGGCTGTTCTTGCTGGAGATTTAATTCTTTCTGCAGCATCTATAGCTCTGGCACGAATTGGAAATAC 962
Query 675 AACTGTTATATCTATTTTAACCCAAGTTATTGAAGATTTGGTGCGTGGTGAATTTCTTCAGCTCGGGTCAAAAG 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AACTGTTATATCTATTTTAACCCAAGTTATTGAAGATTTGGTGCGTGGTGAATTTCTTCAGCTCGGGTCAAAAG 1036
Query 749 AAAATGAGAATGAAAGATTTGCACACTACCTTGAGAAGACATTCAAGAAGACCGCCAGCCTGATAGCCAACAGT 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AAAATGAGAATGAAAGATTTGCACACTACCTTGAGAAGACATTCAAGAAGACCGCCAGCCTGATAGCCAACAGT 1110
Query 823 TGTAAAGCAGTAT------------------------------------------------------------- 835
|||||||||||||
Sbjct 1111 TGTAAAGCAGTATGTCTCTGTTCTAGGATGTCCCGACCCAGTGGTGCATGAGATCGCCTATCAGTACGGAAAAA 1184
Query 836 -------------------------------------------------------------------------- 835
Sbjct 1185 ATGTAGGAATAGCTTTTCAGCTAATAGATGATGTATTGGACTTCACCTCGTGTTCTGACCAGATGGGCAAACCA 1258
Query 836 ------------------------------------------------------------TTCCCAGAAATGAA 849
||||||||||||||
Sbjct 1259 ACATCAGCTGATCTGAAGCTCGGGTTAGCCACTGGTCCTGTCCTGTTTGCCTGTCAGCAGTTCCCAGAAATGAA 1332
Query 850 TGCTATGATCATGCGACGGTTCAGTTTGCCTGGAGATGTAGACAGAGCTCGACAGTATGTACTACAGAG----- 918
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TGCTATGATCATGCGACGGTTCAGTTTGCCTGGAGATGTAGACAGAGCTCGACAGTATGTACTACAGAGTGATG 1406
Query 919 -------------------------------------------------------------------------- 918
Sbjct 1407 GTGTGCAACAAACAACCTACCTCGCCCAGCAGTACTGCCATGAAGCAATAAGAGAGATCAGTAAACTTCGACCA 1480
Query 919 -------------------------------------------------------------------------- 918
Sbjct 1481 TCCCCAGAAAGAGATGCCCTCATTCAGCTTTCAGAAATTGTACTCACAAGAGATAAATGACAACTCTTTCTGTT 1554
Query 919 -------------------------------------------------------------------------- 918
Sbjct 1555 CTTTCTGGCAGCTATCTTACCAGACTGTGCCTAAAGAATTTTGTGGAATACACTTTGTTTGCTTCATGTGCAGA 1628
Query 919 -------------------------------------------------------------------------- 918
Sbjct 1629 TAACCAAAAATCATTTTAAAAGATATCAAACTTATTGATGGGCAATTTATTTTTTTTTATTGCAAAAGTTTTTT 1702
Query 919 -------------------------------------------------------------------------- 918
Sbjct 1703 CAGAAAACTTTTTAAATGTAATTAATAAACCACCTGAATCTGTCATTCTAGTCCTATAAATTATAATCAAGGTA 1776
Query 919 -------------------------------------------------------------------------- 918
Sbjct 1777 TCTTGATGGTTATATGTGGTATTGTTTACACTGTTAATATCCACATGTAAGGCCATTACACAAATAAATAACCA 1850
Query 919 -------------------------------------------------------------------------- 918
Sbjct 1851 ATGTTAAAATTCAAATGGTTTGTCTTGATTTACCGTAGGAGTAAAGGTCAGAAAAATGTGAAGTCTGCATTGAA 1924
Query 919 -------------------------------------------------------------------------- 918
Sbjct 1925 GTCCACATGAGTTATATTTTAACAGTATCCAAAATTTCATATAGGAGAATGGTTTATTATAAAAGACTGTACAT 1998
Query 919 -------------------------------------------------------------------------- 918
Sbjct 1999 AAAATTTAGACAACAGGTTATATACAAATTAAGAGAACAATCCACTTGAAAAATGGAAAGTAGAAGGTAGCTAG 2072
Query 919 -------------------------------------------------------------------------- 918
Sbjct 2073 CTGATCACTAATGATACTTTGTTTGTTTAAAATTAACAAAGGCAAAATGCATATGAAATAGTCACATTGATTTG 2146
Query 919 -------------------------------------------------------------------------- 918
Sbjct 2147 GTAGCAATAATGGTCTTTAATTTTCAGAAATAACTGTTTTGCACTAGTCTTACCATTCACTATGCTGTTATAAG 2220
Query 919 -------------------------------------------------------------------------- 918
Sbjct 2221 TCTGTAGCATCCAGTACATAACTGTAATTTGAATTCCAAACAAATCCTCAATAACACAGAAACCCACACTTGAG 2294
Query 919 ------------------- 918
Sbjct 2295 TGCTCTACTTTAATATCCT 2313
