Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11778
- Subject:
- XR_001740088.1
- Aligned Length:
- 2140
- Identities:
- 1092
- Gaps:
- 1048
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AACGGCCACCGCAGCTGCCTTCGGCGCCGCCAGCCCCGCCATGGCTGCGCCCTGCGCGGAGGACCCCTCGCTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAAGGCATTTTAAGGGCCACCGAGATGCAGTTACCTGTGTGGACTTCAGTATCAACACAAAGCAGCTGGCCAGT 148
Query 1 ---------------------ATGGTCTGGCACATGAAGCCGCAGTCACGCGCCTACCGCTTCACTGGCCACAA 53
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GGCTCCATGGACTCATGCCTCATGGTCTGGCACATGAAGCCGCAGTCACGCGCCTACCGCTTCACTGGCCACAA 222
Query 54 GGATGCCGTCACCTGTGTGAACTTCTCTCCTTCGGGACACCTGCTTGCTTCCGGCTCCCGAGACAAGACTGTCC 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGATGCCGTCACCTGTGTGAACTTCTCTCCTTCGGGACACCTGCTTGCTTCCGGCTCCCGAGACAAGACTGTCC 296
Query 128 GCATCTGGGTACCCAATGTCAAAGGTGAGTCCACTGTGTTTCGTGCACACACAGCCACAGTGAGGAGTGTCCAC 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GCATCTGGGTACCCAATGTCAAAGGTGAGTCCACTGTGTTTCGTGCACACACAGCCACAGTGAGGAGTGTCCAC 370
Query 202 TTCTGCAGTGATGGCCAGTCCTTCGTGACAGCCTCTGACGACAAGACAGTCAAAGTGTGGGCAACTCATCGCCA 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TTCTGCAGTGATGGCCAGTCCTTCGTGACAGCCTCTGACGACAAGACAGTCAAAGTGTGGGCAACTCATCGCCA 444
Query 276 GAAATTCCTGTTCTCCCTGAGCCAGCATATCAACTGGGTCCGCTGTGCCAAGTTCTCCCCCGACGGGCGGCTCA 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAAATTCCTGTTCTCCCTGAGCCAGCATATCAACTGGGTCCGCTGTGCCAAGTTCTCCCCCGACGGGCGGCTCA 518
Query 350 TCGTGTCTGCCAGTGATGACAAGACTGTTAAGCTGTGGGACAAGAGCAGCCGGGAATGTGTCCACTCGTATTGT 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCGTGTCTGCCAGTGATGACAAGACTGTTAAGCTGTGGGACAAGAGCAGCCGGGAATGTGTCCACTCGTATTGT 592
Query 424 GAGCATGGCGGCTTTGTCACCTATGTGGACTTCCACCCCAGTGGGACGTGCATTGCCGCTGCCGGCATGGACAA 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAGCATGGCGGCTTTGTCACCTATGTGGACTTCCACCCCAGTGGGACGTGCATTGCCGCTGCCGGCATGGACAA 666
Query 498 CACAGTGAAGGTGTGGGACGTGCGGACTCACCGGCTGCTGCAGCATTATCAGTTGCACAGTGCAGCAGTGAACG 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CACAGTGAAGGTGTGGGACGTGCGGACTCACCGGCTGCTGCAGCATTATCAGTTGCACAGTGCAGCAGTGAACG 740
Query 572 GGCTCTCTTTCCACCCGTCGGGAAACTACCTGATCACAGCCTCCAGTGACTCAACCCTGAAGATCCTGGACCTG 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGCTCTCTTTCCACCCGTCGGGAAACTACCTGATCACAGCCTCCAGTGACTCAACCCTGAAGATCCTGGACCTG 814
Query 646 ATGGAGGGCCGGCTGCTCTACACACTCCACGGGCATCAGGGACCAGCCACCACTGTTGCCTTTTCAAGAACGGG 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ATGGAGGGCCGGCTGCTCTACACACTCCACGGGCATCAGGGACCAGCCACCACTGTTGCCTTTTCAAGAACGGG 888
Query 720 GGAGTATTTTGCTTCTGGAGGCTCTGATGAACAAGTGATGGTTTGGAAGAGTAACTTTGATATTGTTGATCATG 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GGAGTATTTTGCTTCTGGAGGCTCTGATGAACAAGTGATGGTTTGGAAGAGTAACTTTGATATTGTTGATCATG 962
Query 794 GAGAAGTCACGAAAGTGCCGAGGCCCCCAGCCACACTGGCCAGCTCCATGGGGAATCT---------------- 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GAGAAGTCACGAAAGTGCCGAGGCCCCCAGCCACACTGGCCAGCTCCATGGGGAATCTGATTTCTAGGTGATGC 1036
Query 852 -------------------------------------------------------------------------- 851
Sbjct 1037 TGATGCTGCTGATCCAGGGACTCACTTGGAGAACCACTGGTCTTTTGGAAAACAGTCTAGCCTGTTGTGACTAT 1110
Query 852 -------------------------------------------------------------------------- 851
Sbjct 1111 GGCATCCTGGGCAGGGGAATTAAGGGAAGAAGAAAGTCTCTTTATCTTCGAAGTTTCTATGACTCGTCGTGGGT 1184
Query 852 -------------------------------------------------------------------------- 851
Sbjct 1185 ACAGCTTGGGAGAGGCAATCAGAAAATCAGTGTCCCTCGCAGCCCACTGTAGTCTGCTGCTTTGCAGAAGAGGA 1258
Query 852 ----GCCAGAAGTGGACTTCCCTGTCCCCCCAGGCAGAGGCAGGAGTGTGGAGTCTGTGCAGAGCCAGCCCCAG 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AAAGGCCAGAAGTGGACTTCCCTGTCCCCCCAGGCAGAGGCAGGAGTGTGGAGTCTGTGCAGAGCCAGCCCCAG 1332
Query 922 GAGCCCGTGAGTGTGCCCCAGACACTGACTAGCACGCTGGAGCACATTGTGGGCCAGCTGGATGTCCTCACTCA 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GAGCCCGTGAGTGTGCCCCAGACACTGACTAGCACGCTGGAGCACATTGTGGGCCAGCTGGATGTCCTCACTCA 1406
Query 996 GACAGTCTCCATTCTGGAGCAGCGGTTGACACTGACAGAAGACAAGCTGAAGCAGTGTCTGGAGAACCAGCAGC 1069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GACAGTCTCCATTCTGGAGCAGCGGTTGACACTGACAGAAGACAAGCTGAAGCAGTGTCTGGAGAACCAGCAGC 1480
Query 1070 TAATCATGCAGAGAGCAACACCA--------------------------------------------------- 1092
|||||||||||||||||||||||
Sbjct 1481 TAATCATGCAGAGAGCAACACCATGATCAGGGGAGCAGGAATCAGGAGCTCGGTGGATTTGCAGGTGGCAGGCC 1554
Query 1093 -------------------------------------------------------------------------- 1092
Sbjct 1555 AGGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCATACTGGAGCCC 1628
Query 1093 -------------------------------------------------------------------------- 1092
Sbjct 1629 TGGATTTTTGCAGTTCTGCCCTCCACCTTGCTATCTGCACCAGGAGGCTCTCCACCTGGCAGCCAGAGGTCCCC 1702
Query 1093 -------------------------------------------------------------------------- 1092
Sbjct 1703 AGTGGGCCGGGCTCACACACAAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAATGTAAAGGAG 1776
Query 1093 -------------------------------------------------------------------------- 1092
Sbjct 1777 CCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAGATTGTGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGC 1850
Query 1093 -------------------------------------------------------------------------- 1092
Sbjct 1851 CTTGATTTTCACTCATCATTTGGACATGTGACTGGCTTTTCCTACCTCTGCCATGGTGTAGAAATTGATTGCAC 1924
Query 1093 -------------------------------------------------------------------------- 1092
Sbjct 1925 ATTGATTGGATGAGCCGGGGGTTTTCTCTAAATCTGACTAAAGGCCCAAAGTGGGCCCATCTGAGTCAGGTTTG 1998
Query 1093 -------------------------------------------------------------------------- 1092
Sbjct 1999 TTGAGAACAAGCCCTCTCAAGTGGGTGGTGGCTTTTCAGTGGCCCTGATTTCTGTTCCACACGTGTTCACTGGA 2072
Query 1093 -------------------------------------------------------------------- 1092
Sbjct 2073 GCCAGGTGACTTCCTCCTTGCGTGAGTGAGGGCACAGGAATCTCAAAATTAAACCTGACTTCATTGCA 2140
