Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11778
- Subject:
- XR_940403.1
- Aligned Length:
- 1898
- Identities:
- 814
- Gaps:
- 1084
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AACGGCCACCGCAGCTGCCTTCGGCGCCGCCAGCCCCGCCATGGCTGCGCCCTGCGCGGAGGACCCCTCGCTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAAGGCATTTTAAGGGCCACCGAGATGCAGTTACCTGTGTGGACTTCAGTATCAACACAAAGCAGCTGGCCAGT 148
Query 1 ---------------------ATGGTCTGGCACATGAAGCCGCAGTCACGCGCCTACCGCTTCACTGGCCACAA 53
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GGCTCCATGGACTCATGCCTCATGGTCTGGCACATGAAGCCGCAGTCACGCGCCTACCGCTTCACTGGCCACAA 222
Query 54 GGATGCCGTCACCTGTGTGAACTTCTCTCCTTCGGGACACCTGCTTGCTTCCGGCTCCCGAGACAAGACTGTCC 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGATGCCGTCACCTGTGTGAACTTCTCTCCTTCGGGACACCTGCTTGCTTCCGGCTCCCGAGACAAGACTGTCC 296
Query 128 GCATCTGGGTACCCAATGTCAAAGGTGAGTCCACTGTGTTTCGTGCACACACAGCCACAGTGAGGAGTGTCCAC 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GCATCTGGGTACCCAATGTCAAAGGTGAGTCCACTGTGTTTCGTGCACACACAGCCACAGTGAGGAGTGTCCAC 370
Query 202 TTCTGCAGTGATGGCCAGTCCTTCGTGACAGCCTCTGACGACAAGACAGTCAAAGTGTGGGCAACTCATCGCCA 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TTCTGCAGTGATGGCCAGTCCTTCGTGACAGCCTCTGACGACAAGACAGTCAAAGTGTGGGCAACTCATCGCCA 444
Query 276 GAAATTCCTGTTCTCCCTGAGCCAGCATATCAACTGGGTCCGCTGTGCCAAGTTCTCCCCCGACGGGCGGCTCA 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAAATTCCTGTTCTCCCTGAGCCAGCATATCAACTGGGTCCGCTGTGCCAAGTTCTCCCCCGACGGGCGGCTCA 518
Query 350 TCGTGTCTGCCAGTGATGACAAGACTGTTAAGCTGTGGGACAAGAGCAGCCGGGAATGTGTCCACTCGTATTGT 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCGTGTCTGCCAGTGATGACAAGACTGTTAAGCTGTGGGACAAGAGCAGCCGGGAATGTGTCCACTCGTATTGT 592
Query 424 GAGCATGGCGGCTTTGTCACCTATGTGGACTTCCACCCCAGTGGGACGTGCATTGCCGCTGCCGGCATGGACAA 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAGCATGGCGGCTTTGTCACCTATGTGGACTTCCACCCCAGTGGGACGTGCATTGCCGCTGCCGGCATGGACAA 666
Query 498 CACAGTGAAGGTGTGGGACGTGCGGACTCACCGGCTGCTGCAGCATTATCAGTTGCACAGTGCAGCAGTGAACG 571
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CACAGTGAAGGTGTGGGACGTGCGGACTCACCGGCTGCTGCAGCATTATCAGT--------------------- 719
Query 572 GGCTCTCTTTCCACCCGTCGGGAAACTACCTGATCACAGCCTCCAGTGACTCAACCCTGAAGATCCTGGACCTG 645
Sbjct 720 -------------------------------------------------------------------------- 719
Query 646 ATGGAGGGCCGGCTGCTCTACACACTCCACGGGCATCAGGGACCAGCCACCACTGTTGCCTTTTCAAGAACGGG 719
|||||||||||||||||||||||||||||||||||
Sbjct 720 ---------------------------------------GGACCAGCCACCACTGTTGCCTTTTCAAGAACGGG 754
Query 720 GGAGTATTTTGCTTCTGGAGGCTCTGATGAACAAGTGATGGTTTGGAAGAGTAACTTTGATATTGTTGATCATG 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 755 GGAGTATTTTGCTTCTGGAGGCTCTGATGAACAAGTGATGGTTTGGAAGAGTAACTTTGATATTGTTGATCATG 828
Query 794 GAGAAGTCACGAAAGTGCCGAGGCCCCCAGCCACACTGGCCAGCTCCATGGGGAATCTGCCAGAAGTGGACTTC 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 829 GAGAAGTCACGAAAGTGCCGAGGCCCCCAGCCACACTGGCCAGCTCCATGGGGAATCT---------------- 886
Query 868 CCTGTCCCCCCAGGCAGAGGCAGGAGTGTGGAGTCTGTGCAGAGCCAGCCCCAGGAGCCCGTGAGTGTGCCCCA 941
Sbjct 887 -------------------------------------------------------------------------- 886
Query 942 GACACTGACTAGCACGCTGGAGCACATTGTGGGCCAGCTGGATGTCCTCACTCAGACAGTCTCCATTCTGGAGC 1015
||||||||||||||||||||
Sbjct 887 ------------------------------------------------------GACAGTCTCCATTCTGGAGC 906
Query 1016 AGCGGTTGACACTGACAGAAGACAAGCTGAAGCAGTGTCTGGAGAACCAGCAGCTAATCATGCAGAGAGCAACA 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 907 AGCGGTTGACACTGACAGAAGACAAGCTGAAGCAGTGTCTGGAGAACCAGCAGCTAATCATGCAGAGAGCAACA 980
Query 1090 CCA----------------------------------------------------------------------- 1092
|||
Sbjct 981 CCATGATCAGGGGAGCAGGAATCAGGAGCTCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATGGGAC 1054
Query 1093 -------------------------------------------------------------------------- 1092
Sbjct 1055 TTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCATACTGGAGCCCTGGATTTTTGCAGTTCTGCC 1128
Query 1093 -------------------------------------------------------------------------- 1092
Sbjct 1129 CTCCACCTTGCTATCTGCACCAGGAGGCTCTCCACCTGGCAGCCAGAGGTCCCCAGTGGGCCGGGCTCACACAC 1202
Query 1093 -------------------------------------------------------------------------- 1092
Sbjct 1203 AAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTC 1276
Query 1093 -------------------------------------------------------------------------- 1092
Sbjct 1277 CTTCGGGGTCCTGAGATTGTGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACTCATCATT 1350
Query 1093 -------------------------------------------------------------------------- 1092
Sbjct 1351 TGGACATGTGACTGGCTTTTCCTACCTCTGCCATGGTGTAGAAATTGATTGCACATTGATTGGATGAGCCGGGG 1424
Query 1093 -------------------------------------------------------------------------- 1092
Sbjct 1425 GTTTTCTCTAAATCTGACTAAAGGCCCAAAGTGGGCCCATCTGAGTCAGGTTTGTTGAGAACAAGCCCTCTCAA 1498
Query 1093 -------------------------------------------------------------------------- 1092
Sbjct 1499 GTGGGTGGTGGCTTTTCAGTGGCCCTGATTTCTGTTCCACACGTGTTCACTGGAGCCAGGTGACTTCCTCCTTG 1572
Query 1093 ------------------------------------------------ 1092
Sbjct 1573 CGTGAGTGAGGGCACAGGAATCTCAAAATTAAACCTGACTTCATTGCA 1620
