Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11798
Subject:
XM_011510938.1
Aligned Length:
1764
Identities:
1464
Gaps:
300

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGACCCGTTTTGCCATAGCTCTTCAGAAACCAGGCTGCTTTCAGGAACATTGCTGTGGATTCCCAGGGCCTA  74

Query    1  ----------------ATGGCTGAACTCAATACTCATGTGAATGTCAAGGAAAAGATCTATGCAGTTAGATCAG  58
                            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TTCCACTAGAAGCAAGATGGCTGAACTCAATACTCATGTGAATGTCAAGGAAAAGATCTATGCAGTTAGATCAG  148

Query   59  TTGTTCCCAACAAAAGCAATAATGAAATAGTCCTGGTGCTCCAACAGTTTGATTTTAATGTGGATAAAGCCGTG  132
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TTGTTCCCAACAAAAGCAATAATGAAATAGTCCTGGTGCTCCAACAGTTTGATTTTAATGTGGATAAAGCCGTG  222

Query  133  CAAGCCTTTGTGGATGGCAGTGCAATTCAAGTTCTAAAAGAATGGAATATGACAGG---AAAGAAGAACAATAA  203
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||
Sbjct  223  CAAGCCTTTGTGGATGGCAGTGCAATTCAAGTTCTAAAAGAATGGAATATGACAGGAAAAAAGAAGAACAATAA  296

Query  204  AAGAAAAAGAAGCAAGTCCAAGCAGCATCAAGGCAACAAAGATGCTAAAGACAAGGTGGAGAGGCCTGAGGCAG  277
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AAGAAAAAGAAGCAAGTCCAAGCAGCATCAAGGCAACAAAGATGCTAAAGACAAGGTGGAGAGGCCTGAGGCAG  370

Query  278  GGCCCCTGCAGCCGCAGCCACCACAGATTCAAAACGGCCCCATGAATGGCTGCGAGAAGGACAGCTCGTCCACA  351
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GGCCCCTGCAGCCGCAGCCACCACAGATTCAAAACGGCCCCATGAATGGCTGCGAGAAGGACAGCTCGTCCACA  444

Query  352  GATTCTGCTAACGAAAAACCAGCCCTTATCCCTCGTGAGAAAAAGATCTCGATACTTGAGGAACCTTCAAAGGC  425
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GATTCTGCTAACGAAAAACCAGCCCTTATCCCTCGTGAGAAAAAGATCTCGATACTTGAGGAACCTTCAAAGGC  518

Query  426  ACTTCGTGGGGTCAC-----------------------------------------------------------  440
            |||||||||||||||                                                           
Sbjct  519  ACTTCGTGGGGTCACAGAAGGCAACAGACTACTGCAACAGAAACTATCCTTAGATGGGAACCCCAAACCTATAC  592

Query  441  --------------------------------------------------------------------------  440
                                                                                      
Sbjct  593  ATGGAACAACAGAGAGGTCAGATGGCCTACAGTGGTCAGCTGAGCAGCCTTGTAACCCAAGCAAGCCTAAGGCA  666

Query  441  --------------------------------------------------------------------------  440
                                                                                      
Sbjct  667  AAAACATCTCCTGTTAAGTCCAATACCCCTGCAGCTCATCTTGAAATAAAGCCAGATGAGTTGGCAAAGAAAAG  740

Query  441  AGGCCCAAATATTGAGAAATCAGTGAAGGATTTGCAACGCTGCACCGTTTCTCTAACTAGATATCGCGTCATGA  514
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AGGCCCAAATATTGAGAAATCAGTGAAGGATTTGCAACGCTGCACCGTTTCTCTAACTAGATATCGCGTCATGA  814

Query  515  TTAAGGAAGAAGTGGATAGTTCCGTGAAGAAGATCAAAGCTGCCTTTGCTGAATTACACAACTGCATCATTGAC  588
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TTAAGGAAGAAGTGGATAGTTCCGTGAAGAAGATCAAAGCTGCCTTTGCTGAATTACACAACTGCATCATTGAC  888

Query  589  AAAGAAGTTTCATTAATGGCAGAAATGGATAAAGTTAAAGAAGAAGCCATGGAAATCCTGACTGCTCGTCAGAA  662
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AAAGAAGTTTCATTAATGGCAGAAATGGATAAAGTTAAAGAAGAAGCCATGGAAATCCTGACTGCTCGTCAGAA  962

Query  663  GAAAGCAGAAGAACTAAAGAGACTCACTGACCTTGCCAGTCAGATGGCAGAGATGCAGCTGGCCGAACTCAGGG  736
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GAAAGCAGAAGAACTAAAGAGACTCACTGACCTTGCCAGTCAGATGGCAGAGATGCAGCTGGCCGAACTCAGGG  1036

Query  737  CAGAAATTAAGCACTTTGTCAGCGAGCGTAAATATGACGAGGAGCTCGGGAAAGCTGCCCGGTTTTCCTGTGAC  810
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CAGAAATTAAGCACTTTGTCAGCGAGCGTAAATATGACGAGGAGCTCGGGAAAGCTGCCCGGTTTTCCTGTGAC  1110

Query  811  ATCGAACAGCTGAAGGCCCAAATCATGCTCTGCGGAGAAATTACACATCCAAAGAACAACTATTCCTCAAGAAC  884
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  ATCGAACAGCTGAAGGCCCAAATCATGCTCTGCGGAGAAATTACACATCCAAAGAACAACTATTCCTCAAGAAC  1184

Query  885  TCCCTGCAGCTCCCTGCTGCCTCTGCTGAATGCGCACGCAGCAACCTCTGGGAAACAGAGTAACTTTTCCCGAA  958
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TCCCTGCAGCTCCCTGCTGCCTCTGCTGAATGCGCACGCAGCAACCTCTGGGAAACAGAGTAACTTTTCCCGAA  1258

Query  959  AATCATCCACTCACAATAAGCCCTCTGAAGGCAAAGCGGCAAACCCCAAAATGGTGAGCAGTCTCCCCAGCACC  1032
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AATCATCCACTCACAATAAGCCCTCTGAAGGCAAAGCGGCAAACCCCAAAATGGTGAGCAGTCTCCCCAGCACC  1332

Query 1033  GCCGACCCCTCTCACCAGACCATGCCGGCCAACAAGCAGAATGGATCTTCTAACCAAAGACGGAGATTTAATCC  1106
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GCCGACCCCTCTCACCAGACCATGCCGGCCAACAAGCAGAATGGATCTTCTAACCAAAGACGGAGATTTAATCC  1406

Query 1107  ACAGTATCATAACAACAGGCTAAATGGGCCTGCCAAGTCGCAGGGCAGTGGGAATGAAGCCGAGCCACTGGGAA  1180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  ACAGTATCATAACAACAGGCTAAATGGGCCTGCCAAGTCGCAGGGCAGTGGGAATGAAGCCGAGCCACTGGGAA  1480

Query 1181  AGGGCAACAGCCGCCACGAACACAGAAGACAGCCGCACAACGGCTTCCGGCCCAAAAACAAAGGCGGTGCCAAA  1254
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  AGGGCAACAGCCGCCACGAACACAGAAGACAGCCGCACAACGGCTTCCGGCCCAAAAACAAAGGCGGTGCCAAA  1554

Query 1255  AATCAAGAGGCTTCCTTGGGGATGAAGACCCCCGAGGCCCCGGCCCATTCTGAAAAGCCCCGGCGAAGGCAGCA  1328
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  AATCAAGAGGCTTCCTTGGGGATGAAGACCCCCGAGGCCCCGGCCCATTCTGAAAAGCCCCGGCGAAGGCAGCA  1628

Query 1329  CGCTGCAGACACCTCGGAGGCCAGGCCCTTCCGGGGTAGTGTCGGTAGGGTTTCACAGTGCAATCTCTGCCCCA  1402
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CGCTGCAGACACCTCGGAGGCCAGGCCCTTCCGGGGTAGTGTCGGTAGGGTTTCACAGTGCAATCTCTGCCCCA  1702

Query 1403  CGAGAATAGAAGTTTCCACAGATGCAGCAGTTCTCTCAGTCCCGGCTGTGACGTTGGTGGCC  1464
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  CGAGAATAGAAGTTTCCACAGATGCAGCAGTTCTCTCAGTCCCGGCTGTGACGTTGGTGGCC  1764

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