Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11815
- Subject:
- NR_037162.2
- Aligned Length:
- 3890
- Identities:
- 247
- Gaps:
- 3610
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGCCCCGCCCCTGCGCGCCGCCTCAGCGGCGCCTTCAAGACGCTGGTCCCAGGCACCCACGCCCAGGGCGCCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGATACCCACCCCCTCGGCCCCCCGCACACCCCGGTCCTCGACCCCTCTCCGCAGGATGGTGAGGCCCGTGCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCGCTCGCTCTGGCCTACAGCGGCTGCGAGGACGACAAGACGCTGGGGTGGAGGGACTGGGGGTCGGGAGAAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGCGGCTGAGGGTGGGCATCTGGATGAAGGCAGGAGGAAGAAAAGAGGCGTGGCTATGGGCGGCCAGAAAAGAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCTAGGCCGAGACCCTAGGCCCAGCCTCAGTGTACCCCGCCCCTATTCCGCATCTTTCTGCAGGTTTCCCGGTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCTGGCGAGGATCCTCCAAGGCGTCTCACATGAACCGGCTCAGAAACGCCAAAATCTACGTGGAGAGAGCTGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAAGCAGAAGAAGATCTTTACAATCCAAGGCTGCTACCCGGTGATCCGGTGTCTCTTGCGCCGGAGGGGCTGGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGAGAAGAAGATGGTCCATCGCTCAGGCCCCACCCTGCTGCCACCCCAGAAGGATCTGGATAGCTCAGCGATG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGTGACAGTGACACCACTGAGGATGAGGATGAAGATGAGGACGAGGAGTTCCAGCCATCACAGCTGTTCGACTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CGATGATTTACTGAAATTTGATGACCTAGATGGAACACATGCTCTGATGTCCCGCATGGTCCAGAATGAGATCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCTACTTCATCTGGACCACTCGGCGGGATGTGCTCGACTGTCGCTTCCTCTCCAAGGATCAGATGATAAACCAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TACGCCCGGGCTGGCTCCTTTACCACAAAGGTGGGTCTATGTCTCAATCTCCGGAATTTGCCGTGGTTTGATGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGTTGATGCCAACTCCTTCTTCCCACGCTGCTACTGCCTGGGGGCTGAGGATGACAAAAAAGCCTTCATAGAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCATCCACCTCAGCCTCCCAAAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGCTGGGATTACAGGCGTCAGCCACCGTGACCAGCCTGAAACAGGAGCAAGTTCTAAACTCAGGCTCTAGAGTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGAAAAGGTAGAGTCAGGTTCTGGATCCAAAATGGGGCAAGTCATGATCAGGTTCTGGAACCAGAACAGGCCTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAGCCTAGGGGCTGAGCAGGGTATCCCCTGGCCTGGGAGCAGAGGACTTCTGGCTGACTGCTGCCCGCAACGTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTCAAGCTGGTGGTGAAGTCTGAGTGGAAGTCATACCCTATTCAGGCAGTAGAGGAAGAGGCCTCAGGAGACAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GCAGCCCAAGAAACAGGAGAAAAACCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGTGTGCGTGCG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGGAGTACCTTAGCAACTTGGCCCACATGGACATCGACAAGGACCTGGAGGCCCCGCTGTACCTCACCCCCGAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGCTGGTCCCTCTTCCTCCAGCGCTACTACCAAGTGGTCCACGAAGGGGCAGAACTCAGGCACCTCGACACTCA 1554
Query 1 ----------------------------------------------------------ATGGAAGGGGATCGCA 16
||||||||||||||||
Sbjct 1555 GGTCCAGCGCTGTGAGGACATCCTGCAGCAGCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGGGGATCGCA 1628
Query 17 ACATCTGGATCGTGAAGCCAGGAGCCAAGTCCCGCGGACGAGGCATCATGTGCATGGACCACCTGGAGGAGATG 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 ACATCTGGATCGTGAAGCCAGGAGCCAAGTCCCGCGGACGAGGCATCATGTGCATGGACCACCTGGAGGAGATG 1702
Query 91 CTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAAGGACGGCAAGTGGGTG-----GTGC-AGAAGTATATTGA 158
||||||||||||||||||||||||||||||||||||||||||||.|..||| |||| |.||.|..||..|
Sbjct 1703 CTGAAGCTGGTGAACGGCAACCCCGTGGTGATGAAGGACGGCAACTCAGTGCACCTGTGCAACAACTCCATCCA 1776
Query 159 GCGGCCCCT-----CCTCAT--CTTTGGCA-CCA-----------AG------TTTGACCTCAGACAGTGGTTC 207
|..||.||| .||||| |.|.|||| ||| || |.||..|| ||.|||.|||||
Sbjct 1777 GAAGCACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCT-AGCCAGAGGTTC 1849
Query 208 CTGG--TAACTGACTGGA--------ACCCA----CTTACCGTGTGGTTCTAC------CGCGACAGCTAT--- 258
|.|| .|.||| |.||| .|||| ||| |.||.|| ||.|.|.|..||
Sbjct 1850 CAGGCCCACCTG-CAGGAGATGGGTGCCCCAAATGCTT--------GGTCCACCATCATCGTGCCTGGCATGAA 1914
Query 259 --ATCCGCTTT--TCCACGCAGCCCTTCTCCCTGAAGAACCT----GGACA------AG--------------- 303
|| |||.| |||||||| |||| || |||| ||||| ||
Sbjct 1915 GGAT--GCTGTGATCCACGCA---CTTC-------AG-ACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGC 1975
Query 304 -------------------------------------------------------------------------- 303
Sbjct 1976 TTTGAGCTCTATGGCGCTGACTTCGTGTTCGGGGAGGACTTCCAGCCCTGGCTGATTGAGATCAACGCCAGCCC 2049
Query 304 -------------------------------------------------------------------------- 303
Sbjct 2050 CACGATGGCACCCTCCACAGCAGTCACTGCCCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGCGTGGTCA 2123
Query 304 -------------------------------------------------------------------------- 303
Sbjct 2124 TTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGAGCTCATCTATAAGCAGCCCGTCACCACTTCC 2197
Query 304 -------------------------------------------------------------------------- 303
Sbjct 2198 CCAGCCTCCACACCAAGGCCCAGCTGCCTTCTCCCCATGTACTCCGACACCAGGGCCAGGTCCTCAGACGACAG 2271
Query 304 -------------------------------------------------------------------------- 303
Sbjct 2272 CACAGCAAGCTGGTGGGCACTAAGGCCCTGTCGACCACAGGCAAGGCCTTGAGGACTCTACCCACGGCTAAGGT 2345
Query 304 -------------------------------------------------------------------------- 303
Sbjct 2346 CTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGTGGGCCTCG 2419
Query 304 -------------------------------------------------------------------------- 303
Sbjct 2420 ACCTGTGACTCACACCCAGTGGACAGTGCTGAGCACGGGGTCAGGGCTGGAGGGCACAGGCAGAGGGCAGCTCC 2493
Query 304 -------------------------------------------------------------------------- 303
Sbjct 2494 CAGGCTGGCTGGCACCCCAAGGGAAGAGCTGGTCTCCCTCAGAAGCCCCTTCCTCCACAGACTTCTGATCATCT 2567
Query 304 -------------------------------------------------------------------------- 303
Sbjct 2568 CCCTCTTCTCCCCTCCTTTCACACCGAGGCTCCTGCTCTCCTGTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTT 2641
Query 304 -------------------------------------------------------------------------- 303
Sbjct 2642 GTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAAGG 2715
Query 304 -------------------------------------------------------------------------- 303
Sbjct 2716 CCAGACTGTGACAAACCCAGGGCTGAGGCCTGCCCCATGAAGAGGCTGAGCCCCCTGAAACCCCTGCCCCTTGT 2789
Query 304 -------------------------------------------------------------------------- 303
Sbjct 2790 TGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATATGAAGCTAGGGAAGCCCCTGCTTCGATTCCCCACTGCCC 2863
Query 304 -------------------------------------------------------------------------- 303
Sbjct 2864 TTGTCCTGGATCCAACACCAAATAAAAAGAAACAAGTGAAGTATTTGGGGCTTGACTCCATTGCTGTTGGAGGG 2937
Query 304 -------------------------------------------------------------------------- 303
Sbjct 2938 TCAAGAGTGGATGGGGCGAGGCCGTGTACCCCAGGGTCCACAGCAAGAGCCTGAGGCCATCAGCAGCTCCTCCG 3011
Query 304 -------------------------------------------------------------------------- 303
Sbjct 3012 TGCAGCGAGGCCCAGAATTCCCACCTAAGGACAGACATGGGGCTTCCTATTTAGGGACTCCCCCAGCATCTCCG 3085
Query 304 -------------------------------------------------------------------------- 303
Sbjct 3086 ATCCAGGGGTGGGGAGCGTGAGCCTTCACTTTACAGATGAAGAAACTGAGTCTGAAAGAGGAGGCATGGCTTAC 3159
Query 304 -------------------------------------------------------------------------- 303
Sbjct 3160 CCAAGATCACGTGGCAGTGAGTCGACGCAGGGACATATTGCCAGAACTGCCGAGCACTGGGAGCCCCCCAACCC 3233
Query 304 -------------------------------------------------------------------------- 303
Sbjct 3234 CAGAGAACAAGCCAAGCTAGCAGAATGACACCTACCGGGCATAGGAACGTTAATGCCATGAGACAGGGGAAGGA 3307
Query 304 -------------------------------------------------------------------------- 303
Sbjct 3308 ATTGGCCTTGCCTAAACCTCAGCCCTTCTGCAGAGGGCATGGGTCTATCCCTTCTTCAGCAAGGGGCCAAGGTC 3381
Query 304 -------------------------------------------------------------------------- 303
Sbjct 3382 ACCTAAAAATGAAACATCCAATAAGCCACACCCACCTGAAGAAAAGTGTGGCACTGCTTAGTTGTAGTGGGTTG 3455
Query 304 -------------------------------------------------------------------------- 303
Sbjct 3456 AACTGTGGTCCCCTGAAAAGAGATGTCTACTTGGACCCTGTGAATGTGACCTTATGTGGGAAAAGAGTCTTTGT 3529
Query 304 -------------------------------------------------------------------------- 303
Sbjct 3530 AGCTGGGTATGGTGGCTCACACCTGTTATCCCAGCACTTTGAGAGGCCAAGGCAGGAGATCGCTTGAGCCCGCA 3603
Query 304 -------------------------------------------------------------------------- 303
Sbjct 3604 AGTTCAAGACCAGTCTGGGCAACATGGTGAAACCGTTTCTACAGAAAATTAGCTGGGTGTGGTGGCACACACCT 3677
Query 304 -------------------------------------------------------------------------- 303
Sbjct 3678 GTAGTCCTAGCTACTCGGGAGGCCTAGGTGGGAGGATTACCTGAGCCTGGGAAGATCAAAACTGTGGTGAGCTG 3751
Query 304 -------------------------------------------------------------------------- 303
Sbjct 3752 TGATCACGCCACTGCGCTCTGAGCCTGGGAGACAGAGTGAAACCCTAAATCAAAAAAAAAAAAAAAGGTCTTTG 3825
Query 304 ------------------------------------------ 303
Sbjct 3826 CAGATGTAAATAAATTTAAGATCTTAAATGAGATAATCCCAA 3867
