Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11820
- Subject:
- XM_011541221.1
- Aligned Length:
- 2347
- Identities:
- 514
- Gaps:
- 1814
Alignment
Query 1 ATGGACCAAAGAGAAATTCTGCAGAAGTTCCTGGATGAGGCCCAAAGCAAGAAAATTACTAAAGAGGAGTTTGC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGACCAAAGAGAAATTCTGCAGAAGTTCCTGGATGAGGCCCAAAGCAAGAAAATTACTAAAGAGGAGTTTGC 74
Query 75 CAATGAATTTCTGAAGCTGAAAAGGCAATCTACCAAGTACAAGGCAGACAAAACCTATCCTACAACTGTGGCTG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CAATGAATTTCTGAAGCTGAAAAGGCAATCTACCAAGTACAAGGCAGACAAAACCTATCCTACAACTGTGGCTG 148
Query 149 AGAAGCCCAAGAATATCAAGAAAAACAGATATAAGGATATTTTGCCCTATGATTATAGCCGGGTAGAACTATCC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGAAGCCCAAGAATATCAAGAAAAACAGATATAAGGATATTTTGCCCTATGATTATAGCCGGGTAGAACTATCC 222
Query 223 CTGATAACCTCTGATGAGGATTCCAGCTACATCAATGCCAACTTCATTAAGGGAGTTTATGGACCCAAGGCTTA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTGATAACCTCTGATGAGGATTCCAGCTACATCAATGCCAACTTCATTAAGGGAGTTTATGGACCCAAGGCTTA 296
Query 297 TATTGCCACCCAGGGTCCTTTATCTACAACCCTCCTGGACTTCTGGAGGATGATTTGGGAATATAGTGTCCTTA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TATTGCCACCCAGGGTCCTTTATCTACAACCCTCCTGGACTTCTGGAGGATGATTTGGGAATATAGTGTCCTTA 370
Query 371 TCATTGTTATGGCATGCATGGAGTATGAAATGGGAAAG------------------------------------ 408
||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCATTGTTATGGCATGCATGGAGTATGAAATGGGAAAGAAAAAGTGTGAGCGCTACTGGGCTGAGCCAGGAGAG 444
Query 409 ------------------------------------GAAGCTGAAAAAAGGAAATCTGATTATATAATCAGGAC 446
||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATGCAGCTGGAATTTGGCCCTTTCTCTGTATCCTGTGAAGCTGAAAAAAGGAAATCTGATTATATAATCAGGAC 518
Query 447 TCTAAAAGTTAAGTTCAATAGTGTATCTGTAATTCTTGCCCACCA-------AACAAGCCT---GCAGA--AT- 507
|||||||||||||||||||||||.|.||..||.|.| |.|||| .|||||..| .|||| ||
Sbjct 519 TCTAAAAGTTAAGTTCAATAGTGAAACTCGAACTAT---CTACCAGTTTCATTACAAGAATTGGCCAGACCATG 589
Query 508 CTGTTCAGTCAAATA---ACTCC--------AGCTCATTTC--------------------------------- 537
.|||.|..|||..|| || || |||||||.|.
Sbjct 590 ATGTACCTTCATCTATAGAC-CCTATTCTTGAGCTCATCTGGGATGTACGTTGTTACCAAGAGGATGACAGTGT 662
Query 538 -------------------------------------------------------------------------- 537
Sbjct 663 TCCCATATGCATTCACTGCAGTGCTGGCTGTGGAAGGACTGGTGTTATTTGTGCTATTGATTATACATGGATGT 736
Query 538 -------------------------------------------------------------------------- 537
Sbjct 737 TGCTAAAAGATGGGGAACAATATGAACTGGTCTACAATGCTGTATTAGAACTATTTAAGAGACAGATGGATGTT 810
Query 538 -------------------------------------------------------------------------- 537
Sbjct 811 ATCAGAGATAAACATTCTGGAACAGAGAGTCAAGCAAAGCATTGTATTCCTGAGAAAAATCACACTCTCCAAGC 884
Query 538 -------------------------------------------------------------------------- 537
Sbjct 885 AGACTCTTATTCTCCTAATTTACCAAAAAGTACCACAAAAGCAGCAAAAATGATGAACCAACAAAGGACAAAAA 958
Query 538 -------------------------------------------------------------------------- 537
Sbjct 959 TGGAAATCAAAGAATCTTCTTCCTTTGACTTTAGGACTTCTGAAATAAGTGCAAAAGAAGAGCTAGTTTTGCAC 1032
Query 538 -------------------------------------------------------------------------- 537
Sbjct 1033 CCTGCTAAATCAAGCACTTCTTTTGACTTTCTGGAGCTAAATTACAGTTTTGACAAAAATGCTGACACAACCAT 1106
Query 538 -------------------------------------------------------------------------- 537
Sbjct 1107 GAAATGGCAGACAAAGGCATTTCCAATAGTTGGGGAGCCTCTTCAGAAGCATCAAAGTTTGGATTTGGGCTCTC 1180
Query 538 -------------------------------------------------------------------------- 537
Sbjct 1181 TTTTGTTTGAGGGATGTTCTAATTCTAAACCTGTAAATGCAGCAGGAAGATATTTTAATTCAAAGGTGCCAATA 1254
Query 538 -------------------------------------------------------------------------- 537
Sbjct 1255 ACACGGACCAAATCAACTCCTTTTGAATTGATACAGCAGAGAGAAACCAAGGAGGTGGACAGCAAGGAAAACTT 1328
Query 538 -------------------------------------------------------------------------- 537
Sbjct 1329 TTCTTATTTGGAATCTCAACCACATGATTCTTGTTTTGTAGAGATGCAGGCTCAAAAAGTAATGCATGTTTCTT 1402
Query 538 -------------------------------------------------------------------------- 537
Sbjct 1403 CAGCAGAACTGAATTATTCACTGCCATATGACTCTAAACACCAAATACGTAATGCCTCTAATGTAAAGCACCAT 1476
Query 538 -------------------------------------------------------------------------- 537
Sbjct 1477 GACTCTAGTGCTCTTGGTGTATATTCTTACATACCTTTAGTGGAAAATCCTTATTTTTCATCATGGCCTCCAAG 1550
Query 538 -------------------------------------------------------------------------- 537
Sbjct 1551 TGGTACCAGTTCTAAGATGTCTCTTGATTTACCTGAGAAGCAAGATGGAACTGTTTTTCCTTCTTCTCTGTTGC 1624
Query 538 -------------------------------------------------------------------------- 537
Sbjct 1625 CAACATCCTCTACATCCCTCTTCTCTTATTACAATTCACATGATTCTTTATCACTGAATTCTCCAACCAATATT 1698
Query 538 -------------------------------------------------------------------------- 537
Sbjct 1699 TCCTCACTATTGAACCAGGAGTCAGCTGTACTAGCAACTGCTCCAAGGATAGATGATGAAATCCCCCCTCCACT 1772
Query 538 -------------------------------------------------------------------------- 537
Sbjct 1773 TCCTGTATGGACACCTGAATCATTTATTGTGGTTGAGGAAGCTGGAGAATTCTCACCAAATGTTCCCAAATCCT 1846
Query 538 -------------------------------------------------------------------------- 537
Sbjct 1847 TATCCTCAGCTGTGAAGGTAAAAATTGGAACATCACTGGAATGGGGTGGAACATCTGAACCAAAGAAATTTGAT 1920
Query 538 -------------------------------------------------------------------------- 537
Sbjct 1921 GACTCTGTGATACTTAGACCAAGCAAGAGTGTAAAACTCCGAAGTCCTAAATCAGAACTACATCAAGATCGTTC 1994
Query 538 -------------------------------------------------------------------------- 537
Sbjct 1995 TTCTCCCCCACCTCCTCTCCCAGAAAGAACTCTAGAGTCCTTCTTTCTTGCCGATGAAGATTGTATGCAGGCCC 2068
Query 538 -------------------------------------------------------------------------- 537
Sbjct 2069 AATCTATAGAAACATATTCTACTAGCTATCCTGACACCATGGAAAATTCAACATCTTCAAAACAGACACTGAAG 2142
Query 538 -------------------------------------------------------------------------- 537
Sbjct 2143 ACTCCTGGAAAAAGTTTCACAAGGAGTAAGAGTTTGAAAATTTTGCGAAACATGAAAAAGAGTATCTGTAATTC 2216
Query 538 -------------------------------------------------------------------------- 537
Sbjct 2217 TTGCCCACCAAACAAGCCTGCAGAATCTGTTCAGTCAAATAACTCCAGCTCATTTCTGAATTTTGGTTTTGCAA 2290
Query 538 ----------------------------------------------------- 537
Sbjct 2291 ACCGTTTTTCAAAACCCAAAGGACCAAGGAATCCACCACCAACTTGGAATATT 2343
