Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11864
- Subject:
- NM_001351850.2
- Aligned Length:
- 5766
- Identities:
- 483
- Gaps:
- 5283
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCAACTAGTGGCAGAGCCAGGCCTAGACGCCAGGTGTCCTGGCTCTCAAGACATTCCGCTGCCCGAGGAATG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAACAGGGATTTAGTGCAAGAAGAAGAACAGTTGATGGAAGAAAAGAAAAAGAAAAAAGACGACAAGAAAAAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGAAGCTGCTCAAAAGAAGGCCACTGAACAAAAAATCAAAGTGCCAGAACAGATAAAGCCCAGTGTAAGCCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTCAGCCTGCCAACTCTAATAACGGCACTTCCACAGCAACCAGCACTAATAATAATGCCAAGCGAGCTACAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAACAATCAGCAGCCACAGCAGCAGCAGCAACAGCAGCAGCCGCAGCAGCAGCAGCCACAGCAGCAGCCACAGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGCAGCCGCAGCAGCAGCAGCCACAGCAGCAGCCACAGGCCTTGCCTCGGTATCCTCGTGAAGTACCTCCACGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTTCGCCACCAGGAACACAAACAGCTTCTAAAGAGGGGTCAGCATTTTCCTGTTATAGCAGCAAACCTTGGATC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGCTGTTAAGGTGTTAAACAGCCAGTCAGAAAGCAGTGCTTTAACAAATCAACAGCCACAAAATAACGGAGAGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGCAGAACAGCAAAAACCAGTCAGATATAAACCACAGTACTTCAGGATCCCATTATGAAAATTCCCAGCGGGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTGTGTCTTCTACAAGTGATTCTAGCACAAACTGTAAGAATGCTGTTGTAAGTGACTTGTCGGAAAAAGAAGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATGGCCCTCAGCCCCTGGCAGTGATCCGGAGTTGGCTTCAGAATGTATGGATGCTGATTCTGCCTCCAGTTCTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AATCAGAGAGAAACATCACTATCATGGCTTCAGGGAACACAGGTGGTGAAAAAGATGGCCTTCGGAATAGCACT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGACTTGGTTCCCAAAACAAGTTTGTAGTTGGTAGCAGCAGCAATAATGTGGGCCATGGAAGTAGTACTGGGCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ATGGGGTTTTTCCCATGGAGCCATAATAAGCACATGTCAGGTCTCTGTGGATGCTCCTGAAAGCAAATCTGAAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTAGCAACAATAGAATGAATGCTTGGGGCACTGTAAGTTCTTCATCAAATGGAGGGTTAAATCCAAGCACTTTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AATTCAGCTAGCAACCATGGTGCCTGGCCAGTATTAGAGAACAATGGACTTGCCCTAAAAGGGCCTGTAGGGAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGGTAGTTCTGGCATTAATATTCAGTGCAGTACTATAGGCCAGATGCCTAACAATCAGAGTATTAACTCTAAAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGAGTGGTGGTTCTACCCATGGTACCTGGGGAAGCCTTCAGGAAACTTGTGAATCTGAAGTAAGTGGTACACAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAGGTTTCATTCAGTGGTCAACCTCAAAATATTACCACTGAAATGACTGGACCAAATAACACTACTAACTTTAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GACCTCTAGTTTACCAAACTCCGGTTCAGTGCAGAATAATGAGCTGCCTAGTAGTAACACAGGGGCCTGGCGTG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGAGCACAATGAATCATCCTCAGATGCAGGCTCCATCAGGTATGAATGGCACTTCCCTTTCTCACCTTAGCAAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGAGAGTCAAAAAGTGGAGGCTCTTATGGTACTACATGGGGTGCCTATGGTTCTAATTACTCTGGAGACAAATG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTCAGGCCCTAATGGCCAAGCTAATGGTGACACTGTGAATGCAACTCTAATGCAGCCTGGCGTAAATGGTCCTA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGGGCACTAACTTTCAAGTTAACACAAACAAAGGAGGTGGTGTGTGGGAATCTGGTGCAGCAAACTCCCAGAGT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ACATCATGGGGAAGTGGAAATGGCGCAAATTCTGGAGGAAGTCGAAGAGGATGGGGAACCCCTGCACAAAACAC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGGCACTAATTTACCCAGCGTTGAGTGGAACAAACTGCCTAGCAATCAGCATTCCAATGATAGTGCAAATGGCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATGGTAAGACGTTTACAAATGGATGGAAATCTACTGAGGAAGAGGATCAGGGTTCTGCCACATCTCAGACAAAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GAGCAAAGCAGTGTGTGGGCCAAAACAGGAGGTACAGTGGAGAGCGATGGTAGTACAGAAAGCACTGGACGCCT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TGAGGAAAAAGGAACTGGGGAAAGTCAGAGTAGAGACAGAAGAAAAATTGATCAGCACACATTACTCCAAAGCA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTGTAAACAGAACTGACTTAGATCCACGTGTCCTGTCCAACTCTGGTTGGGGACAGACTCCTATTAAGCAGAAT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ACTGCCTGGGATACAGAAACATCACCTAGAGGGGAACGAAAGACTGACAATGGGACAGAGGCCTGGGGAAGCTC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGCAACACAGACTTTTAACTCAGGGGCATGTATAGATAAGACTAGCCCTAATGGTAATGATACCTCATCTGTAT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CAGGGTGGGGCGATCCCAAACCTGCTCTGAGGTGGGGAGATTCCAAAGGCTCAAACTGCCAGGGGGGGTGGGAA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GATGATTCTGCTGCTACAGGAATGGTCAAGAGCAATCAGTGGGGGAATTGCAAAGAGGAGAAGGCTGCATGGAA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TGACTCGCAAAAGAATAAACAGGGATGGGGTGATGGACAAAAATCAAGCCAAGGGTGGTCTGTTTCTGCCAGTG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ATAACTGGGGAGAAACTTCAAGGAATAACCATTGGGGTGAGGCCAATAAGAAATCCAGCTCAGGAGGTAGTGAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AGTGACAGGTCCGTTTCCGGTTGGAACGAACTTGGTAAAACTAGTTCTTTCACTTGGGGAAACAACATAAATCC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AAATAATTCATCAGGATGGGATGAATCTTCTAAACCTACTCCTTCCCAGGGATGGGGAGACCCTCCAAAGTCTA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ATCAGTCTCTAGGTTGGGGAGATTCGTCAAAGCCAGTCAGCTCTCCAGACTGGAACAAGCAACAAGACATTGTT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GGATCTTGGGGAATCCCACCAGCTACAGGCAAACCTCCTGGTACAGGCTGGCTGGGGGGACCTATACCAGCCCC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AGCAAAAGAAGAAGAACCCACAGGCTGGGAGGAACCATCCCCAGAATCTATACGTCGCAAAATGGAGATTGATG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ATGGAACTTCAGCTTGGGGAGATCCAAGCAAATACAACTACAAAAATGTGAACATGTGGAACAAAAACGTCCCA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AATGGCAACAGCCGTTCAGACCAGCAAGCACAGGTACATCAGCTGCTAACGCCTGCAAGTGCCATCTCAAACAA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 AGAGGCAAGCAGTGGCTCTGGCTGGGGTGAGCCCTGGGGGGAGCCTTCTACTCCAGCCACAACTGTGGATAATG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GTACTTCAGCATGGGGTAAGCCCATAGACAGTGGTCCCAGCTGGGGGGAACCCATTGCTGCGGCATCCAGCACA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TCCACGTGGGGCTCCAGCTCTGTTGGTCCACAAGCATTAAGCAAATCTGGGCCAAAATCTATGCAAGATGGCTG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GTGTGGTGATGATATGCCATTGCCTGGAAATCGCCCCACTGGCTGGGAAGAGGAAGAGGATGTGGAGATTGGAA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TGTGGAATAGTAATTCATCTCAAGAGCTTAACTCATCTTTAAATTGGCCACCATATACAAAGAAAATGTCATCG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 AAGGGTCTGAGTGGCAAAAAAAGGAGAAGGGAAAGGGGAATGATGAAAGGTGGAAACAAACAAGAAGAAGCGTG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GATAAATCCATTTGTTAAACAGTTTTCAAACATCAGTTTTTCGAGAGACTCACCAGAGGAAAATGTACAAAGCA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 ATAAGATGGACCTTTCTGGAGGAATGTTACAAGACAAACGAATGGAGATAGATAAACATAGCCTAAATATTGGT 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 GATTACAATCGAACGGTCGGGAAAGGCCCTGGTTCTCGGCCTCAGATTTCCAAAGAGTCTTCCATGGAGCGCAA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 TCCTTATTTTGATAAGAATGGCAATCCCAGTATGTTTGGTGTTGGAAACACAGCAGCACAACCCCGGGGCATGC 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 AGCAGCCTCCAGCACAACCTCTTAGTTCATCTCAGCCTAATCTCCGTGCTCAAGTGCCTCCTCCATTACTCTCC 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 CCTCAGGTTCCAGTTTCATTGCTGAAGTATGCACCAAACAACGGTGGCCTGAATCCACTCTTTGGCCCTCAACA 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 GGTAGCCATGCTGAACCAGCTATCCCAGCTAAACCAGCTTTCTCAGATCTCCCAGTTACAGCGATTGTTAGCGC 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 AGCAGCAAAGGGCGCAGAGTCAGAGAAGCGTGCCTTCTGGGAACCGGCCGCAGCAAGACCAGCAGGGTCGACCT 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 CTTAGTGTGCAGCAGCAAATGATGCAACAATCTCGTCAACTTGATCCAAACCTGTTGGTGAAGCAGCAGACTCC 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 ACCATCTCAGCAGCAGCCACTCCATCAGCCAGCCATGAAGTCTTTCCTTGACAATGTCATGCCCCACACTACAC 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 CTGAGCTGCAAAAAGGGCCATCACCAATAAATGCTTTCAGCAACTTCCCTATAGGCTTGAACTCAAACTTGAAT 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 GTAAATATGGATATGAACAGTATTAAAGAGCCACAGTCAAGACTAAGGAAGTGGACGACAGTGGACAGCATTTC 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 TGTGAACACATCTTTGGATCAAAACTCCAGCAAACATGGTGCTATTTCAAGTGGTTTCAGGCTGGAAGAGTCTC 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 CATTTGTTCCCTATGACTTTATGAACAGCAGTACTTCACCAGCCAGTCCTCCAGGTTCAATAGGAGATGGCTGG 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 CCACGTGCCAAATCGCCTAACGGCTCTAGCAGTGTTAATTGGCCACCAGAATTTCGTCCTGGTGAGCCATGGAA 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 AGGTTATCCAAACATTGACCCTGAAACTGACCCTTACGTCACTCCTGGCAGTGTCATAAACAATCTTTCAATTA 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 ATACTGTGCGGGAAGTTGACCACCTCAGGGACAGGAACAGTGGGTCATCCTCATCCTTGAACACCACGCTGCCT 4884
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4885 TCAACTAGTGCCTGGTCATCCATTCGTGCCTCCAACTACAACGTTCCCCTCAGCAGTACAGCACAAAGCACTTC 4958
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4959 AGCCAGAAATAGTGATTCCAAATTGACATGGTCTCCTGGTTCAGTTACAAACACCTCTCTGGCTCATGAGCTGT 5032
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5033 GGAAGGTCCCTTTGCCACCTAAAAACATCACTGCTCCGTCCCGCCCACCTCCGGGACTGACTGGTCAGAAGCCA 5106
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5107 CCCTTGTCTACGTGGGATAATTCTCCCCTTCGTATAGGTGGAGGATGGGGAAATTCTGACGCCAGATATACCCC 5180
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5181 AGGTTCCAGCTGGGGTGAGAGCAGCTCAGGGAGAATAACAAATTGGCTTGTTCTAAAAAACCTTACACCTCAGA 5254
Query 1 -----------------------------ATGCAGCACGGCCCGCTGATCACATTCCACCTGAACCTCCCTCAC 45
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5255 TCGATGGCTCAACTCTGCGCACTCTGTGCATGCAGCACGGCCCGCTGATCACATTCCACCTGAACCTCCCTCAC 5328
Query 46 GGAAATGCTCTGGTCCGCTACAGTTCAAAAGAAGAGGTAGTGAAGGCACAAAAGTCTCTGCACATGTGTGTACT 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5329 GGAAATGCTCTGGTCCGCTACAGTTCAAAAGAAGAGGTAGTGAAGGCACAAAAGTCTCTGCACATGTGTGTACT 5402
Query 120 GGGGAACACTACTATTCTTGCTGAGTTTGCCAGTGAAGAGGAGATCAGTCGTTTCTTTGCACAAAGCCAGTCTC 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5403 GGGGAACACTACTATTCTTGCTGAGTTTGCCAGTGAAGAGGAGATCAGTCGTTTCTTTGCACAAAGCCAGTCTC 5476
Query 194 TGACCCCTTCTCCCGGCTGGCAGTCTCTCGGGTCCAGCCAGAGCCGGCTGGGCTCCCTCGACTGTTCCCACTCA 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5477 TGACCCCTTCTCCCGGCTGGCAGTCTCTCGGGTCCAGCCAGAGCCGGCTGGGCTCCCTCGACTGTTCCCACTCA 5550
Query 268 TTCTCCAGCCGGACCGATCTCAATCACTGGAATGGTGCTGGGCTGTCGGGAACTAACTGTGGAGACCTTCACGG 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5551 TTCTCCAGCCGGACCGATCTCAATCACTGGAATGGTGCTGGGCTGTCGGGAACTAACTGTGGAGACCTTCACGG 5624
Query 342 CACTTCACTCTGGGGGACCCCGCATTATTCCACAAGCCTGTGGGGTCCCCCAAGCAGCAGCGACCCCCGAGGAA 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5625 CACTTCACTCTGGGGGACCCCGCATTATTCCACAAGCCTGTGGGGTCCCCCAAGCAGCAGCGACCCCCGAGGAA 5698
Query 416 TTAGCAGCCCATCTCCCATTAACGCTTTTCTTTCTGTTGACCACCTGGGTGGGGGTGGAGAGTCCATG 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5699 TTAGCAGCCCATCTCCCATTAACGCTTTTCTTTCTGTTGACCACCTGGGTGGGGGTGGAGAGTCCATG 5766
