Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11864
- Subject:
- XM_011241757.1
- Aligned Length:
- 5865
- Identities:
- 456
- Gaps:
- 5385
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCAACTAGTGGCAGAGCCCAGCCTAGAAGCCAGGTGTCCTGGATCTCAAGATACTCCACTGCCTGAGGAATG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAACAGGGATTTAGTGCAAGAAGAAGAACAGTTGATGGAAGAAAAGAAAAAGAAAAAAGACGACAAGAAAAAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGAAGCTGCTCAAAAGAAGGCCACTGAACAAAAAATCAAAGTGCCAGAACAGATAAAGCCCAGTGTAAGCCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTCAGCCTGCCAACTCTGATAACGGCACTTCCACAGCAACCAGCACTAATAATAATGCCAAGCGAGCTACAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAGCAATCAGCAGCCGCCGCCACCGCAGCAGCAGCAGCCGCAGCAAGAGCAGCAGCAGCAGCAGCCACAAGCCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCCTCGGTATCCACGTGAAGTACCTCCACGATTTCGCCACCAGGAACACAAACAGCTTCTGAAGAGGGGTCAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CATTTTCCTGTCATAGCAGCAAACTTGGGATCTGCTGTTAAGGTGTTAAACAGCCAATCAGAAAGCAGTGCTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AACAAATCAACAGCCACAAAATAACGGAGAGGTGCAGAACAGCAAGAGCCAGTCAGATATAAATCATAATACTT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGGATCCCATTATGAAAATTGCCAGCGGGGACCTGTGTCTTCTACAAGTGACTGTAGCACAAGCTGTAAGAAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCTGTAAACGACTTGTTGGAAAAAGAAGCATGGCCCTCAGCCCCTGGCAGTGATCCTGAGTTGGCTCCAGAATG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TATAGATGCTGATTCTGCCTCCAATTCTGAGTCAGAGAGAAACATCACTGTCATGGCTTCAGGGAACACAGGTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTGAGAAAGATGGCCTTCGGAACAGCACTGGACTTGGTTCTCAAAGCAAATTTGTGGTTGGTAGCAGCAGCAAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATGTGGGCCATGGAAGTAGTACTGGCCCATGGGGCTTTCCCCATGGAGCCCTAATAAGCACATGTCAGGTCTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGTGGATGCTCCTGAAAGCAAACCAGAAAGTAGTAACAATAGGATGAATGCTTGGGGCACTGTAAGTTCTTCAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAAATGGAGGGTTAAATCCAAGCACTTTGAATTCAGCTAGCAACCATGGTGCCTGGCCAGTATTAGAAAACAAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGACTTGCCCTAAAAGGGCCTGTAGGGAGTGGGAGTTCTGGCATCAATATTCAGTGTAGTACCATAGGCCAGAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCCTAACAATCAGAATATCAACTCTAAAGTCAGTGGCTCTTCTACCCATGGTACCTGGGGTAGCCTTCAGGAAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTTGTGAGCCTGAAGTAAGTGGTACACAGAAGGTTTCATTCAGTGGTCAACCTCAGAATATCACCACTGAAACG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACTGGACCAAATAACACTACTAACTTTATGACCTCTAGTTTACCAAACTCCGGTTCAGTACAAAATAATGAACT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCCTACTAGTAATCCAGGGGCCTGGCGTGTGAGCACAATGAATCATCCTCAGATACAGGCTCCGTCAGTTATGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATGGCACTTCCCTTTCTCACCTTAGTAATGGAGAGTCAAAAACTGGAGGCTCCTACGGTACTACATGGGGTGCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TATGGTTCTAATTACTCTGGCGACAAATGTGCAGGCCCTAATGGCCAAGCCAATGGTGACACTGTGAATGCAAC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCTAATGCAGCCTGGCATAAATGGGCCTATGGGCACTAACTTTCAAGTTAATACAAATAAAGGGGGAGGTGTAT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGGAGCCTGGGACAGTGAATTCCCAGAGTTCACCATGGGGAAGTGGAAATGGTGCAAATTCTGGAGGAAGTCGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGAGGATGGGGAAGTCCTGCACAGAACACTGGCACTGGTCTATCCAGTGTCGAGTGGAACAAACTGCCTAGCAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCAGCATTCCAATGACAGTGCAAATGGCAATGGTAAGAAGCTTACAAATGGATGGAAATCTACTGAGGAAGACG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATCAGGGTTCTGCCACATCTCAGACAAATGAGCAAAACAGTGTGTGGGCCAAAGCAGGAGGCACAGTGGAGAGT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GATGGTAGTGCAGAGAGCACTGGACGCCTTGAAGAAAAAGTAACCGGGGAAAGTCAGAGTAGAGATAGAAGAAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AATTGATCAGCACACATTACTCCAAAGCATTGTAAACAGAACTGACTTAGATCCACGTGTCCTATCCAACTCTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GGTGGGGACAGACTCCTATTAAGCAGAATACTGCCTGGGATACAGAGACATCACCAAGAGGGGAAAGAAAGACT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GACAATGGGACAGAGGCCTGGGGAAGCTCTGCAACACAGACTTTTAACTCAGGGGCATGTACAGATAAGACTAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CCCTAATAGTAATGATACCTCATCTGTATCAGGGTGGGGTGATCCCAAACCTACTCTGAGGTGGGGAGATTCCA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AAGGCTCAAACTGCCAGGGGGGGTGGGAAGATGACTCTGCTGCTACAGGAATGATCAAGAGCAACCAGTGGGGG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GGTTGCAAGGAAGACAAGTCTACATGGAATGATTCGCAAAAGAGCAAACAAGGCTGGGGTGACGGACAAAAGTC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AAGCCAAGGTTGGTCCATTTCTGCCGGTGATAACTGGGGAGAATCTTCCAGGAGTAACCATTGGGGTGAGGCCA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ATAAGAAATCCAGCTCAGGAGGCAGTGACAGTGACAGGTCCATTTCTGGTTGGAACGAACTTGGGAAAACTAGT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TCTTTTACTTGGGGAAATAATATAAATCCAAATAACTCATCGGGATGGGATGAATCTTCTAAACCGAACTCTTC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CCAGGGGTGGGGAGACCCTCCAAAGTGTAATCAGTCTCTAGGTTGGGGAGATTCATCAAAGCCAGTTAGTTCTC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CAGATTGGAACAAGCAACAAGACATTGTTGGATCATGGGGAATCCCACCAGCCACCAGCAAGCCTCCTGGTACA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GGCTGGCTCGGGGGACCTATTCCTGCTCCAGCAAAGGAGGAAGAACCCACAGGCTGGGAGGAGCCATCCCCAGA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 ATCTATACGAAGAAAAATGGAGATCGATGATGGAACTTCAGCTTGGGGAGATCCAAGCAAATACAACTACAAAA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ATGTGAACATGTGGAATAAAAACATCCCGGAAGCCAGCGGCCGCTCAGACCAGCAAGCGCAGATGCACCGGCTA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TTGCCAGCCGCAAGTGCCGTCTCAAGCAAGGAGACCAGCAGTGGCTCTGGCTGGGGTGAGCCTTGGGCAGAGCC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TTCTACTCCAGCCACAACTGTGGATAATGGTACTTCAGCCTGGGGCAAGCCCATAGACAGTGGTCCCAGCTGGG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GAGAACCCATTACTGCAGCATCCAATGCATCCACGTGGGGCTCCAGCTCTGTTGGTCCACAGTCATTAAGCAAA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TCTGGGCCCAAATCTATGCAAGATGGCTGGTGTGGTGATGATATGCCATTGCCTGGAAGTCGACCCACTGGCTG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GGAAGAGGAGGAGGATGTAGAGATTGGAATGTGGAACAGTAACTCATCTCAAGAGCTTAACTCATCTTTAAATT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 GGCCACCATATACCAAGAAAATGTCATCAAAGGGTCTGAGTGGCAAAAAAAGGAGAAGGGAAAGGGGAATGATG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 AAAGGCGGAAACAAACAAGAGGACGCATGGATAAATCCATTCGTTAAACAGTTTTCAAATATCAGTTTTTCGAG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 AGACTCACCAGAAGAAAATGTACAGAGCAATAAGATGGATCTTTCTGGAGGAATGTTACAAGACAAGCGGATGG 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 AGATTGATAAACATAGCCTGAATATTGGTGATTACAATCGAACGGTCGGGAAAGGCCCTGGGTCTCGGCCTCAG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 ATTTCCAAAGAGTCTTCCATGGAGCGCAATCCTTACTTTGATAAGGATGGCATTGTAGCAGATGAATCCCAAAA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CATGCAGTTTATGTCCAGTCAAAGCATGAAGCTTCCCCCTTCAAATAGTGCACTACCTAACCAGGCCCTTGGCT 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 CCATAGCAGGGCTGGGTACGCAAAACTTGAATTCTGTTAGACAGAATGGCAATCCCAATATGTTTGGTGTTGGA 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 AACACAGCAGCACAACCCCGGGGCATGCAGCAGCCTCCAGCACAACCTCTCAGTTCATCTCAGCCTAATCTTCG 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 TGCTCAAGTGCCTCCTCCATTACTCTCCCCTCAGGTTCCAGTTTCATTGCTGAAGTATGCACCAAACAACGGTG 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 GCCTGAATCCGCTCTTTGGCCCTCAACAGGTAGCCATGCTGAACCAGCTATCCCAACTAAACCAGCTTTCTCAG 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 ATCTCCCAGTTACAGCGATTGTTAGCGCAGCAGCAGAGGGCACAGAGTCAGAGAAGCGCGCCTTCTGCTAACCG 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 ACAGCAGCAGGACCAGCAGGGTCGACCTCTTAGTGTGCAGCAGCAGATGATGCAACAGTCTCGTCAACTTGATC 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 CAAGCCTGCTGGTGAAGCAGCAGACTCCGCCTTCTCAGCAGCCGCTCCATCAGCCAGCCATGAAGTCCTTCCTT 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 GACAATGTCATGCCCCACACTACACCCGAGCTGCAGAAAGGGCCATCGCCAGTAAATGCTTTCAGCAACTTTCC 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 TATAGGCTTGAACTCAAACTTGAATGTAAATATGGATATGAACAGTATTAAAGAGCCACAGTCACGACTAAGGA 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 AGTGGACAACAGTGGACAGCATGTCTGTGAACACGTCGTTGGATCAGAACTCCAGCAAACATGGTGCTATTTCA 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 AGTGGTTTTAGGCTGGAAGAGTCTCCATTTGTTCCCTATGACTTTATGAATAGCAGTACTTCACCAGCCAGTCC 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 TCCAGGTTCAATAGGAGATGGCTGGCCACGTGCCAAATCGCCTAACGGCTCTAGCAGTGTTAACTGGCCACCAG 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 AATTTCGCCCTGGTGAACCATGGAAAGGTTATCCAAACATTGACCCTGAAACTGACCCTTACGTCACTCCTGGC 4884
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4885 AGTGTCATAAACAGTCTTTCAATTAATACTGTGCGGGAAGTTGACCACCTCAGGGACAGGAACAGTGGGTCATC 4958
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4959 CTCATCCTTGAACACCACGCTGCCTTCAACTAGTGCCTGGTCATCCATTCGTGCCTCCAACTACAATGTTCCCC 5032
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5033 TCAGCAGTACAGCACAAAGCACTTCAGCCAGAAATAGTGATTCCAAATTGACGTGGTCTCCTGGTTCAGTTACA 5106
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5107 AACACCTCTCTGGCTCATGAGCTGTGGAAAGTCCCTTTGCCACCTAAAAACATCACTGCTCCGTCCCGCCCACC 5180
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5181 TCCGGGGCTGACTGGTCAGAAGCCACCCTTGTCTACGTGGGATAATTCTCCCCTTCGTGTAGGTGGAGGATGGG 5254
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5255 GAAATTCTGATGCCAGATATACCCCAGGCTCCAGCTGGGGTGAGAGCAGCTCAGGGAGAATAACCAATTGGCTT 5328
Query 1 ------------------------------------------------------ATGCAGCACGGCCCGCTGAT 20
||||||||.|||||.|||||
Sbjct 5329 GTTCTGAAGAACCTCACACCTCAGATTGATGGCTCAACTCTGCGCACCCTGTGCATGCAGCATGGCCCACTGAT 5402
Query 21 CACATTCCACCTGAACCTCCCTCACGGAAATGCTCTGGTCCGCTACAGTTCAAAAGAAGAGGTAGTGAAGGCAC 94
.||||||||.|||||||||||.||.|||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 5403 TACATTCCATCTGAACCTCCCACATGGAAATGCTCTGGTCCGTTACAGTTCAAAAGAAGAGGTAGTGAAGGCAC 5476
Query 95 AAAAGTCTCTGCACATGTGTGTACTGGGGAACACTACTATTCTTGCTGAGTTTGCCAGTGAAGAGGAGATCAGT 168
||||||||||||||||||||||.||||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 5477 AAAAGTCTCTGCACATGTGTGTGCTGGGGAACACTACTATTCTCGCTGAGTTTGCCAGTGAAGAGGAGATCAGT 5550
Query 169 CGTTTCTTTGCACAAAGCCAGTCTCTGACCCCTTCTCCCGGCTGGCAGTCTCTCGGGTCCAGCCAGAGCCGGCT 242
||.||||||||||||||.||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 5551 CGCTTCTTTGCACAAAGTCAGTCTCTGACCCCTTCTCCTGGCTGGCAGTCTCTCGGGTCCAGCCAGAGCCGGCT 5624
Query 243 GGGCTCCCTCGACTGTTCCCACTCATTCTCCAGCCGGACCGATCTCAATCACTGGAATGGTGCTGGGCTGTCGG 316
||||||.|||||||||||||||||.||||||||||||||.|||.||||||||||||||||||||||||||||||
Sbjct 5625 GGGCTCTCTCGACTGTTCCCACTCGTTCTCCAGCCGGACTGATGTCAATCACTGGAATGGTGCTGGGCTGTCGG 5698
Query 317 GAACTAACTGTGGAGACCTTCACGGCACTTCACTCTGGGGGACCCCGCATTATTCCACAAGCCTGTGGGGTCCC 390
||.||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||||||||||||
Sbjct 5699 GAGCTAACTGTGGAGACCTTCACGGCACTTCCCTCTGGGGGACCCCACATTATTCCACAAGCCTGTGGGGTCCC 5772
Query 391 CCAAGCAGCAGCGACCCCCGAGGAATTAGCAGCCCATCTCCCATTAACGCTTTTCTTTCTGTTGACCACCTGGG 464
|| .||||||||||||||.|||||||||||||||||.||||||||.||||||||||||||||||||||||||
Sbjct 5773 CC---GAGCAGCGACCCCCGGGGAATTAGCAGCCCATCCCCCATTAATGCTTTTCTTTCTGTTGACCACCTGGG 5843
Query 465 TGGGGGTGGAGAGTCCATG 483
|||||||||.|||||||||
Sbjct 5844 TGGGGGTGGGGAGTCCATG 5862
