Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11864
- Subject:
- XM_017023146.1
- Aligned Length:
- 5838
- Identities:
- 483
- Gaps:
- 5355
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGGGATTTAGTGCAAGAAGAAGAACAGTTGATGGAAGAAAAGAAAAAGAAAAAAGACGACAAGAAAAAGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAAGCTGCTCAAAAGAAGGCCACTGAACAAAAAATCAAAGTGCCAGAACAGATAAAGCCCAGTGTAAGCCAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCAGCCTGCCAACTCTAATAACGGCACTTCCACAGCAACCAGCACTAATAATAATGCCAAGCGAGCTACAGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AACAATCAGCAGCCACAGCAGCAGCAGCAACAGCAGCAGCCGCAGCAGCAGCAGCCACAGCAGCAGCCACAGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCAGCCGCAGCAGCAGCAGCCACAGCAGCAGCCACAGGCCTTGCCTCGGTATCCTCGTGAAGTACCTCCACGAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTCGCCACCAGGAACACAAACAGCTTCTAAAGAGGGGTCAGCATTTTCCTGTTATAGCAGCAAACCTTGGATCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCTGTTAAGGTGTTAAACAGCCAGTCAGAAAGCAGTGCTTTAACAAATCAACAGCCACAAAATAACGGAGAGGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCAGAACAGCAAAAACCAGTCAGATATAAACCACAGTACTTCAGGATCCCATTATGAAAATTCCCAGCGGGGAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTGTGTCTTCTACAAGTGATTCTAGCACAAACTGTAAGAATGCTGTTGTAAGTGACTTGTCGGAAAAAGAAGCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGGCCCTCAGCCCCTGGCAGTGATCCGGAGTTGGCTTCAGAATGTATGGATGCTGATTCTGCCTCCAGTTCTGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATCAGAGAGAAACATCACTATCATGGCTTCAGGGAACACAGGTGGTGAAAAAGATGGCCTTCGGAATAGCACTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GACTTGGTTCCCAAAACAAGTTTGTAGTTGGTAGCAGCAGCAATAATGTGGGCCATGGAAGTAGTACTGGGCCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGGGGTTTTTCCCATGGAGCCATAATAAGCACATGTCAGGTCTCTGTGGATGCTCCTGAAAGCAAATCTGAAAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TAGCAACAATAGAATGAATGCTTGGGGCACTGTAAGTTCTTCATCAAATGGAGGGTTAAATCCAAGCACTTTGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATTCAGCTAGCAACCATGGTGCCTGGCCAGTATTAGAGAACAATGGACTTGCCCTAAAAGGGCCTGTAGGGAGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGTAGTTCTGGCATTAATATTCAGTGCAGTACTATAGGCCAGATGCCTAACAATCAGAGTATTAACTCTAAAGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAGTGGTGGTTCTACCCATGGTACCTGGGGAAGCCTTCAGGAAACTTGTGAATCTGAAGTAAGTGGTACACAGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGGTTTCATTCAGTGGTCAACCTCAAAATATTACCACTGAAATGACTGGACCAAATAACACTACTAACTTTATG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACCTCTAGTTTACCAAACTCCGGTTCAGTGCAGAATAATGAGCTGCCTAGTAGTAACACAGGGGCCTGGCGTGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAGCACAATGAATCATCCTCAGATGCAGGCTCCATCAGGTATGAATGGCACTTCCCTTTCTCACCTTAGCAATG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GAGAGTCAAAAAGTGGAGGCTCTTATGGTACTACATGGGGTGCCTATGGTTCTAATTACTCTGGAGACAAATGT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TCAGGCCCTAATGGCCAAGCTAATGGTGACACTGTGAATGCAACTCTAATGCAGCCTGGCGTAAATGGTCCTAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGGCACTAACTTTCAAGTTAACACAAACAAAGGAGGTGGTGTGTGGGAATCTGGTGCAGCAAACTCCCAGAGTA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CATCATGGGGAAGTGGAAATGGCGCAAATTCTGGAGGAAGTCGAAGAGGATGGGGAACCCCTGCACAAAACACT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GGCACTAATTTACCCAGCGTTGAGTGGAACAAACTGCCTAGCAATCAGCATTCCAATGATAGTGCAAATGGCAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGGTAAGACGTTTACAAATGGATGGAAATCTACTGAGGAAGAGGATCAGGGTTCTGCCACATCTCAGACAAATG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGCAAAGCAGTGTGTGGGCCAAAACAGGAGGTACAGTGGAGAGCGATGGTAGTACAGAAAGCACTGGACGCCTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GAGGAAAAAGGAACTGGGGAAAGTCAGAGTAGAGACAGAAGAAAAATTGATCAGCACACATTACTCCAAAGCAT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TGTAAACAGAACTGACTTAGATCCACGTGTCCTGTCCAACTCTGGTTGGGGACAGACTCCTATTAAGCAGAATA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTGCCTGGGATACAGAAACATCACCTAGAGGGGAACGAAAGACTGACAATGGGACAGAGGCCTGGGGAAGCTCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GCAACACAGACTTTTAACTCAGGGGCATGTATAGATAAGACTAGCCCTAATGGTAATGATACCTCATCTGTATC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGGGTGGGGCGATCCCAAACCTGCTCTGAGGTGGGGAGATTCCAAAGGCTCAAACTGCCAGGGGGGGTGGGAAG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ATGATTCTGCTGCTACAGGAATGGTCAAGAGCAATCAGTGGGGGAATTGCAAAGAGGAGAAGGCTGCATGGAAT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GACTCGCAAAAGAATAAACAGGGATGGGGTGATGGACAAAAATCAAGCCAAGGGTGGTCTGTTTCTGCCAGTGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TAACTGGGGAGAAACTTCAAGGAATAACCATTGGGGTGAGGCCAATAAGAAATCCAGCTCAGGAGGTAGTGACA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GTGACAGGTCCGTTTCCGGTTGGAACGAACTTGGTAAAACTAGTTCTTTCACTTGGGGAAACAACATAAATCCA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AATAATTCATCAGGATGGGATGAATCTTCTAAACCTACTCCTTCCCAGGGATGGGGAGACCCTCCAAAGTCTAA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TCAGTCTCTAGGTTGGGGAGATTCGTCAAAGCCAGTCAGCTCTCCAGACTGGAACAAGCAACAAGACATTGTTG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GATCTTGGGGAATCCCACCAGCTACAGGCAAACCTCCTGGTACAGGCTGGCTGGGGGGACCTATACCAGCCCCA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GCAAAAGAAGAAGAACCCACAGGCTGGGAGGAACCATCCCCAGAATCTATACGTCGCAAAATGGAGATTGATGA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TGGAACTTCAGCTTGGGGAGATCCAAGCAAATACAACTACAAAAATGTGAACATGTGGAACAAAAACGTCCCAA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ATGGCAACAGCCGTTCAGACCAGCAAGCACAGGTACATCAGCTGCTAACGCCTGCAAGTGCCATCTCAAACAAA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GAGGCAAGCAGTGGCTCTGGCTGGGGTGAGCCCTGGGGGGAGCCTTCTACTCCAGCCACAACTGTGGATAATGG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TACTTCAGCATGGGGTAAGCCCATAGACAGTGGTCCCAGCTGGGGGGAACCCATTGCTGCGGCATCCAGCACAT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CCACGTGGGGCTCCAGCTCTGTTGGTCCACAAGCATTAAGCAAATCTGGGCCAAAATCTATGCAAGATGGCTGG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TGTGGTGATGATATGCCATTGCCTGGAAATCGCCCCACTGGCTGGGAAGAGGAAGAGGATGTGGAGATTGGAAT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GTGGAATAGTAATTCATCTCAAGAGCTTAACTCATCTTTAAATTGGCCACCATATACAAAGAAAATGTCATCGA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AGGGTCTGAGTGGCAAAAAAAGGAGAAGGGAAAGGGGAATGATGAAAGGTGGAAACAAACAAGAAGAAGCGTGG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 ATAAATCCATTTGTTAAACAGTTTTCAAACATCAGTTTTTCGAGAGACTCACCAGAGGAAAATGTACAAAGCAA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TAAGATGGACCTTTCTGGAGGAATGTTACAAGACAAACGAATGGAGATAGATAAACATAGCCTAAATATTGGTG 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 ATTACAATCGAACGGTCGGGAAAGGCCCTGGTTCTCGGCCTCAGATTTCCAAAGAGTCTTCCATGGAGCGCAAT 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 CCTTATTTTGATAAGGATGGCATTGTAGCAGATGAATCCCAAAACATGCAGTTTATGTCCAGTCAAAGCATGAA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 GCTTCCCCCTTCAAATAGTGCACTACCTAACCAGGCCCTTGGCTCCATAGCAGGGCTGGGTATGCAAAACTTGA 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 ATTCTGTTAGACAGAATGGCAATCCCAGTATGTTTGGTGTTGGAAACACAGCAGCACAACCCCGGGGCATGCAG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 CAGCCTCCAGCACAACCTCTTAGTTCATCTCAGCCTAATCTCCGTGCTCAAGTGCCTCCTCCATTACTCTCCCC 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 TCAGGTTCCAGTTTCATTGCTGAAGTATGCACCAAACAACGGTGGCCTGAATCCACTCTTTGGCCCTCAACAGG 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 TAGCCATGCTGAACCAGCTATCCCAGCTAAACCAGCTTTCTCAGATCTCCCAGTTACAGCGATTGTTAGCGCAG 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 CAGCAAAGGGCGCAGAGTCAGAGAAGCGTGCCTTCTGGGAACCGGCCGCAGCAAGACCAGCAGGGTCGACCTCT 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 TAGTGTGCAGCAGCAAATGATGCAACAATCTCGTCAACTTGATCCAAACCTGTTGGTGAAGCAGCAGACTCCAC 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 CATCTCAGCAGCAGCCACTCCATCAGCCAGCCATGAAGTCTTTCCTTGACAATGTCATGCCCCACACTACACCT 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 GAGCTGCAAAAAGGGCCATCACCAATAAATGCTTTCAGCAACTTCCCTATAGGCTTGAACTCAAACTTGAATGT 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 AAATATGGATATGAACAGTATTAAAGAGCCACAGTCAAGACTAAGGAAGTGGACGACAGTGGACAGCATTTCTG 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 TGAACACATCTTTGGATCAAAACTCCAGCAAACATGGTGCTATTTCAAGTGGTTTCAGGCTGGAAGAGTCTCCA 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 TTTGTTCCCTATGACTTTATGAACAGCAGTACTTCACCAGCCAGTCCTCCAGGTTCAATAGGAGATGGCTGGCC 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 ACGTGCCAAATCGCCTAACGGCTCTAGCAGTGTTAATTGGCCACCAGAATTTCGTCCTGGTGAGCCATGGAAAG 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 GTTATCCAAACATTGACCCTGAAACTGACCCTTACGTCACTCCTGGCAGTGTCATAAACAATCTTTCAATTAAT 4884
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4885 ACTGTGCGGGAAGTTGACCACCTCAGGGACAGGAACAGTGGGTCATCCTCATCCTTGAACACCACGCTGCCTTC 4958
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4959 AACTAGTGCCTGGTCATCCATTCGTGCCTCCAACTACAACGTTCCCCTCAGCAGTACAGCACAAAGCACTTCAG 5032
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5033 CCAGAAATAGTGATTCCAAATTGACATGGTCTCCTGGTTCAGTTACAAACACCTCTCTGGCTCATGAGCTGTGG 5106
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5107 AAGGTCCCTTTGCCACCTAAAAACATCACTGCTCCGTCCCGCCCACCTCCGGGACTGACTGGTCAGAAGCCACC 5180
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5181 CTTGTCTACGTGGGATAATTCTCCCCTTCGTATAGGTGGAGGATGGGGAAATTCTGACGCCAGATATACCCCAG 5254
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5255 GTTCCAGCTGGGGTGAGAGCAGCTCAGGGAGAATAACAAATTGGCTTGTTCTAAAAAACCTTACACCTCAGATC 5328
Query 1 ---------------------------ATGCAGCACGGCCCGCTGATCACATTCCACCTGAACCTCCCTCACGG 47
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5329 GATGGCTCAACTCTGCGCACTCTGTGCATGCAGCACGGCCCGCTGATCACATTCCACCTGAACCTCCCTCACGG 5402
Query 48 AAATGCTCTGGTCCGCTACAGTTCAAAAGAAGAGGTAGTGAAGGCACAAAAGTCTCTGCACATGTGTGTACTGG 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5403 AAATGCTCTGGTCCGCTACAGTTCAAAAGAAGAGGTAGTGAAGGCACAAAAGTCTCTGCACATGTGTGTACTGG 5476
Query 122 GGAACACTACTATTCTTGCTGAGTTTGCCAGTGAAGAGGAGATCAGTCGTTTCTTTGCACAAAGCCAGTCTCTG 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5477 GGAACACTACTATTCTTGCTGAGTTTGCCAGTGAAGAGGAGATCAGTCGTTTCTTTGCACAAAGCCAGTCTCTG 5550
Query 196 ACCCCTTCTCCCGGCTGGCAGTCTCTCGGGTCCAGCCAGAGCCGGCTGGGCTCCCTCGACTGTTCCCACTCATT 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5551 ACCCCTTCTCCCGGCTGGCAGTCTCTCGGGTCCAGCCAGAGCCGGCTGGGCTCCCTCGACTGTTCCCACTCATT 5624
Query 270 CTCCAGCCGGACCGATCTCAATCACTGGAATGGTGCTGGGCTGTCGGGAACTAACTGTGGAGACCTTCACGGCA 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5625 CTCCAGCCGGACCGATCTCAATCACTGGAATGGTGCTGGGCTGTCGGGAACTAACTGTGGAGACCTTCACGGCA 5698
Query 344 CTTCACTCTGGGGGACCCCGCATTATTCCACAAGCCTGTGGGGTCCCCCAAGCAGCAGCGACCCCCGAGGAATT 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5699 CTTCACTCTGGGGGACCCCGCATTATTCCACAAGCCTGTGGGGTCCCCCAAGCAGCAGCGACCCCCGAGGAATT 5772
Query 418 AGCAGCCCATCTCCCATTAACGCTTTTCTTTCTGTTGACCACCTGGGTGGGGGTGGAGAGTCCATG 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5773 AGCAGCCCATCTCCCATTAACGCTTTTCTTTCTGTTGACCACCTGGGTGGGGGTGGAGAGTCCATG 5838
