Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11916
- Subject:
- NM_001081074.1
- Aligned Length:
- 1785
- Identities:
- 337
- Gaps:
- 1419
Alignment
Query 1 ATGGAATCAAATCACAAATCCGGGGATGGATTGAGCGGCACTCAGAAGGAAGCAGCCCTCCGCGCACTGGTCCA 74
|||||||||||||||||||||||||||||||||||||||||.|||||||||||.||.|||||||||||||||||
Sbjct 1 ATGGAATCAAATCACAAATCCGGGGATGGATTGAGCGGCACCCAGAAGGAAGCGGCACTCCGCGCACTGGTCCA 74
Query 75 GCGCACAGGATATAGCTTGGTCCAGGAAAATGGACAAAGAAAATATGGTGGCCCTCCACCTGGTTGGGATGCTG 148
|||||||||||||||||||||||||||||||||||||||.||.|||||||||||||||||.||.||||||.||.
Sbjct 75 GCGCACAGGATATAGCTTGGTCCAGGAAAATGGACAAAGGAAGTATGGTGGCCCTCCACCAGGCTGGGATTCTA 148
Query 149 CACCCCCTGAAAGGGGCTGTGAAATTTTTATTGGAAAACTTCCCCGAGACCTTTTTGAGGATGAGCTTATACCA 222
|||||||.|||||||||||.||.|||||.|||||.|||||||||||.|||||.|||||||||||.||.||||||
Sbjct 149 CACCCCCAGAAAGGGGCTGCGAGATTTTCATTGGGAAACTTCCCCGGGACCTCTTTGAGGATGAACTCATACCA 222
Query 223 TTATGTGAAAAAATCGGTAAAATTTATGAAATGAGAATGATGATGGATTTTAATGGCAACAATAGAGGATATGC 296
||.|||||||||||.|||||||||||||||||||||.|||||||||||||||||||.|||||.|||||.|||||
Sbjct 223 TTGTGTGAAAAAATTGGTAAAATTTATGAAATGAGATTGATGATGGATTTTAATGGTAACAACAGAGGCTATGC 296
Query 297 ATTTGTAACATTTTCAAATAAAGTGGAAGCCAAGAATGCAATCAAGCAACTTAATAATTATGAAATTAGG---- 366
||||||||||||.||||||||...|||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 297 ATTTGTAACATTCTCAAATAAGCAGGAAGCCAAGAATGCAATCAAGCAACTTAATAATTATGAAATTCGGACTG 370
Query 367 -------------------------------------------------------------------------- 366
Sbjct 371 GCCGTCTCTTGGGAGTCTGTGCCAGTGTGGACAATTGCCGATTGTTTGTGGGAGGAATCCCCAAAACCAAAAAG 444
Query 367 -------------------------------------------------------------------------- 366
Sbjct 445 AGGGAAGAAATCTTATCAGAGATGAAAAAAGTCACAGAAGGAGTTGTTGATGTCATTGTCTACCCAAGTGCTGC 518
Query 367 -------------------------------------------------------------------------- 366
Sbjct 519 TGATAAAACCAAAAACCGGGGATTTGCCTTTGTGGAATATGAGAGTCACCGAGCAGCCGCCATGGCTAGGCGGA 592
Query 367 -------------------------------------------------------------------------- 366
Sbjct 593 GGCTGCTGCCAGGAAGAATTCAGTTGTGGGGACATCCTATTGCAGTAGACTGGGCAGAACCAGAAGTTGAAGTT 666
Query 367 -------------------------------------------------------------------------- 366
Sbjct 667 GATGAGGACACAATGTCTTCCGTGAAAATCCTGTACGTAAGGAACCTTATGCTGTCTACCTCGGAAGAAATGAT 740
Query 367 -------------------------------------------------------------------------- 366
Sbjct 741 TGAAAAGGAATTCAACAGTATTAAACCAGGTGCTGTGGAAAGAGTGAAGAAGATCCGAGACTACGCTTTTGTGC 814
Query 367 -------------------------------------------------------------------------- 366
Sbjct 815 ACTTCAGTAACCGAGAAGATGCAGTTGAAGCCATGAAGGCTTTGAATGGCAAGGTGCTGGATGGTTCCCCAATA 888
Query 367 -------------------------------------------------------------------------- 366
Sbjct 889 GAAGTGACCTTGGCCAAGCCAGTGGACAAGGACAGTTATGTTAGGTACACCCGGGGCACCGGTGGCAGGAACAC 962
Query 367 -------------------------------------------------------------------------- 366
Sbjct 963 CATGCTGCAAGGAGAATACACCTACCCTCTGAGCCATGTTTATGACCCTACCACAACCTACCTTGGAGCTCCTG 1036
Query 367 -------------------------------------------------------------------------- 366
Sbjct 1037 TCTTCTATACCCCCCAAGCCTATGCAGCCATTCCAAGTCTTCATTTCCCAGCTACTAAAGGACATCTCAGCAAC 1110
Query 367 -------------------------------------------------------------------------- 366
Sbjct 1111 AGGGCTCTCATCAGGACCCCTTCTGTCAGAGAAATTTACATGAATGTCCCTGTAGGGGCTGCGGGGGTGAGAGG 1184
Query 367 -------------------------------------------------------------------------- 366
Sbjct 1185 ACTGGGCGGCCGTGGGTATTTGGCATACACAGGCCTGGGTCGAGGATACCACGTCAAAGGAGACAAGAGAGAAG 1258
Query 367 -------------------------------------------------------------------------- 366
Sbjct 1259 ACAAACTCTATGATCTTCTGCCTGGGATGGAGCTCACCCCGATGAATACTGTCTCTTTAAAACCACAAGGAATT 1332
Query 367 -------------------------------------------------------------------------- 366
Sbjct 1333 AAACTTGCTCCTCAGATATTAGAAGAAATCTGTCAGAAAAATAACTGGGGACAGCCAGTGTACCAACTGCATTC 1406
Query 367 -------------------------------------------------------------------------- 366
Sbjct 1407 TGCCATTGGACAAGATCAAAGACAGTTATTCCTCTACAAAGTAACTATCCCAGCGCTGGCCAGCCAGAATCCTG 1480
Query 367 -------------------------------------------------------------------------- 366
Sbjct 1481 CAATCCACCCTTTCATACCACCAAAGCTAAGCGCCTATGTGGATGAAGCGAAGAGGTATGCTGCAGAGCACACT 1554
Query 367 -------------------------------------------------------------------------- 366
Sbjct 1555 CTACAGACACTAGGCATCCCCACAGAAGGAGGGGACGCTGGGACTACAGCACCCACGGCCACTTCTGCCACTGT 1628
Query 367 -------------------------------------------------------------------------- 366
Sbjct 1629 GTTCCCAGGATATGCTGTCCCCAGTGCCACCGCTCCTGTGTCTACAGCCCAGCTCAAGCAAGCAGTGACACTTG 1702
Query 367 -------------------------------------------------------------------------- 366
Sbjct 1703 GACAAGACTTAGCAGCATATACAACCTATGAGGTCTACCCTACTTTTGCACTGACCACCCGAGGCGATGCATAT 1776
Query 367 --------- 366
Sbjct 1777 GGAACCTTC 1785
