Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11917
Subject:
NM_178238.3
Aligned Length:
762
Identities:
553
Gaps:
165

Alignment

Query   1  ATGGGTCGGCCCCTGCTGCTGCCCCTACTGCCCCTGCTGCTGCCGCCAGCATTTCTGCAGCCTAGTGGCTCCAC  74
           ||||||||||||||||||||||||||.||||.||||||||.||||||||||||||||||||||.||||||||||
Sbjct   1  ATGGGTCGGCCCCTGCTGCTGCCCCTGCTGCTCCTGCTGCAGCCGCCAGCATTTCTGCAGCCTGGTGGCTCCAC  74

Query  75  AGGATCTGGTCCAAGCTACCTTTATGGGGTCACTCAACCAAAACACCTCTCAGCCTCCATGGGTGGCTCTGTGG  148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  75  AGGATCTGGTCCAAGCTACCTTTATGGGGTCACTCAACCAAAACACCTCTCAGCCTCCATGGGTGGCTCTGTGG  148

Query 149  AAATCCCCTTCTCCTTCTATTACCCCTGGGAGTTAGCCACAGCTCCCGACGTGAGAATATCCTGGAGACGGGGC  222
           |||||||||||||||||||||||||||||||||||||||.||.||||.||||||||||||||||||||||||||
Sbjct 149  AAATCCCCTTCTCCTTCTATTACCCCTGGGAGTTAGCCATAGTTCCCAACGTGAGAATATCCTGGAGACGGGGC  222

Query 223  CACTTCCACGGGCAGTCCTTCTACAGCACAAGGCCGCCTTCCATTCACAAGGATTATGTGAACCGGCTCTTTCT  296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223  CACTTCCACGGGCAGTCCTTCTACAGCACAAGGCCGCCTTCCATTCACAAGGATTATGTGAACCGGCTCTTTCT  296

Query 297  GAACTGGACAGAGGGTCAGAAGAGCGGCTTCCTCAGGATCTCCAACCTGCAGAAGCAGGACCAGTCTGTGTATT  370
           |||||||||||||||||||.||||||||||||||||||||||.|||||||.||||.||||||||||||||||||
Sbjct 297  GAACTGGACAGAGGGTCAGGAGAGCGGCTTCCTCAGGATCTCAAACCTGCGGAAGGAGGACCAGTCTGTGTATT  370

Query 371  TCTGCCGAGTTGAGCTGGACACACGGAGCTCAGGGAGGCAGCAGTGGCAGTCCATCGAGGGGACCAAACTCTCC  444
           ||||||||||.|||||||||||.|||||.||||||||||||||||.||||||||||.||||||||||||||.||
Sbjct 371  TCTGCCGAGTCGAGCTGGACACCCGGAGATCAGGGAGGCAGCAGTTGCAGTCCATCAAGGGGACCAAACTCACC  444

Query 445  ATCACCCAGG--GTCAGCAGCGGACTAAAGCCACAAC-------CCCAGCCAGGGAACCCTTCCAAAACACAGA  509
           ||||||||||  |||| ||    ||.|   ||||.||       ||||| |||          ||.||| ||  
Sbjct 445  ATCACCCAGGCTGTCA-CA----ACCA---CCACCACCTGGAGGCCCAG-CAG----------CACAAC-CA--  496

Query 510  GGAGCCATATGAGAATATCAGGAATGAAGGACAAAATACAGATCCCAAGCTAAATCCCAAGCTCCACCTCACCC  583
               ||        |||.|.||..|.|.||.|     |||||    ||||.|             |...|||.|
Sbjct 497  ----CC--------ATAGCCGGCCTCAGGGTC-----ACAGA----AAGCAA-------------AGGGCACTC  536

Query 584  AGA------GCACCT---------CCCAGCCA---------------CCGTCCC----CTCAAGAGCCCCCAGA  623
           |||      ||||||         |.|.||||               |.|||.|    |||||.|         
Sbjct 537  AGAATCATGGCACCTAAGTCTGGACACTGCCATCAGGGTTGCATTGGCTGTCGCTGTGCTCAAAA---------  601

Query 624  ACGAGACCCTGT---------ACT-CTGTCTTAAAGGCCT---------------------AACCAATGG--AC  664
                   ||||         ||| ||||       ||||                     ||..||.||  .|
Sbjct 602  --------CTGTCATTTTGGGACTGCTGT-------GCCTCCTCCTCCTGTGGTGGAGGAGAAGGAAAGGTAGC  660

Query 665  AGCCCTCTCAA-----GAC---  678
           ||..|.| |||     |||   
Sbjct 661  AGGGCGC-CAAGCAGTGACTTC  681