Protein Global Alignment

Description

Query:
ccsbBroad304_11918
Subject:
NM_001329857.2
Aligned Length:
2149
Identities:
631
Gaps:
1506

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  MESGERLPSSAASSTTPTSSSTPSVASVVSKGGLSTGVASLSSTINPCGAEWWRTTDAHTRTGATFFPPLLGIP  74

Query    1  -----------------------------------------------------------MGQTKSTSSGGGNRK  15
                                                                       |||||||||||||||
Sbjct   75  PLFAPPAQNHDSSSFHSRTSGKSNRNGPEKGVNGSINGSNTSSVIGINTSVLSTTASSSMGQTKSTSSGGGNRK  148

Query   16  CNQEQSKNQPLDARVDKIKDKKPRKKAMESSSNSDSDSGTSSDTSSEGISSSDSDDLEEDEEEEDQSIEESEDD  89
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CNQEQSKNQPLDARVDKIKDKKPRKKAMESSSNSDSDSGTSSDTSSEGISSSDSDDLEEDEEEEDQSIEESEDD  222

Query   90  DSDSESEAQHKSNNQVLLHGISDPKADGQKATEKAQEKRIHQPLPLASESQTHSFQSQQKQPQVLSQQLPFIFQ  163
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  DSDSESEAQHKSNNQVLLHGISDPKADGQKATEKAQEKRIHQPLPLASESQTHSFQSQQKQPQVLSQQLPFIFQ  296

Query  164  SSQAKEESVNKHTSVIQSTGLVSNVKPLSLVNQAKKETYMKLIVPSPDVLKAGNKNTSEESSSLTSELRSKREQ  237
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct  297  SSQAKEESVNKHTSVIQSTGLVSNVKPLSLVNQAKKETYMKLIVPSPDVLKAGNKNTSEESSLLTSELRSKREQ  370

Query  238  YKQAFPSQLKKQESSKSLKKVIAALSNPKATSSSPAHPKQTLENNHPNPFLTNALLGNHQPNGVIQSVIQEAPL  311
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  YKQAFPSQLKKQESSKSLKKVIAALSNPKATSSSPAHPKQTLENNHPNPFLTNALLGNHQPNGVIQSVIQEAPL  444

Query  312  ALTTKTKMQSKINENIAAASSTPFSSPVNLSTSGRRTPGNQTPVMPSASPILHSQGKEKAVSNNVNPVKTQHHS  385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  ALTTKTKMQSKINENIAAASSTPFSSPVNLSTSGRRTPGNQTPVMPSASPILHSQGKEKAVSNNVNPVKTQHHS  518

Query  386  HPAKSLVEQFRGTDSDIPSSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQ-----------------------  436
            |||||||||||||||||||||||||||||||||||||||||||||||||||                       
Sbjct  519  HPAKSLVEQFRGTDSDIPSSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQSESDSNSESDTEGSEEEDDDDKD  592

Query  437  --------------------------------------------------------------------------  436
                                                                                      
Sbjct  593  QDESDSDTEGEKTSMKLNKTTSSVKSPSMSLTGHSTPRNLHIAKAPGSAPAALCSESQSPAFLGTSSSTLTSSP  666

Query  437  -SGTSKRRRVTDERELRIPLEYGWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRDNF  509
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  HSGTSKRRRVTDERELRIPLEYGWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRDNF  740

Query  510  SFSAKIRVGDFYEARDGPQGMQWCLLKEEDVIPRIRAMEGRRGRPPNPDRQRAREESRMRRRKGRPPNVGNAEF  583
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  SFSAKIRVGDFYEARDGPQGMQWCLLKEEDVIPRIRAMEGRRGRPPNPDRQRAREESRMRRRKGRPPNVGNAEF  814

Query  584  LDNADAKLLRKLQAQEIARQAAQIKLLRKLQKQEQARVAKKAKKQQAIMLLRRSGSKKNR--------------  643
            ||||||||||||||||||||||||||||||||||||||||.||||||||........|..              
Sbjct  815  LDNADAKLLRKLQAQEIARQAAQIKLLRKLQKQEQARVAKEAKKQQAIMAAEEKRKQKEQIKIMKQQEKIKRIQ  888

Query  644  --------------------------------------------------------------------------  643
                                                                                      
Sbjct  889  QIRMEKELRAQQILEAKKKKKEEAANAKLLEAEKRIKEKEMRRQQAVLLKHQELERHRLDMERERRRQHMMLMK  962

Query  644  --------------------------------------------------------------------------  643
                                                                                      
Sbjct  963  AMEARKKAEEKERLKQEKRDEKRLNKERKLEQRRLELEMAKELKKPNEDMCLADQKPLPELPRIPGLVLSGSTF  1036

Query  644  --------------------------------------------------------------------------  643
                                                                                      
Sbjct 1037  SDCLMVVQFLRNFGKVLGFDVNIDVPNLSVLQEGLLNIGDSMGEVQDLLVRLLSAAVCDPGLITGYKAKTALGE  1110

Query  644  --------------------------------------------------------------------------  643
                                                                                      
Sbjct 1111  HLLNVGVNRDNVSEILQIFMEAHCGQTELTESLKTKAFQAHTPAQKASVLAFLINELACSKSVVSEIDKNIDYM  1184

Query  644  --------------------------------------------------------------------------  643
                                                                                      
Sbjct 1185  SNLRRDKWVVEGKLRKLRIIHAKKTGKRDTSGGIDLGEEQHPLGTPTPGRKRRRKGGDSDYDDDDDDDSDDQGD  1258

Query  644  --------------------------------------------------------------------------  643
                                                                                      
Sbjct 1259  EDDEDEEDKEDKKGKKTDICEDEDEGDQAASVEELEKQIEKLSKQQSQYRRKLFDASHSLRSVMFGQDRYRRRY  1332

Query  644  --------------------------------------------------------------------------  643
                                                                                      
Sbjct 1333  WILPQCGGIFVEGMESGEGLEEIAKEREKLKKAESVQIKEEMFETSGDSLNCSNTDHCEQKEDLKEKDNTNLFL  1406

Query  644  --------------------------------------------------------------------------  643
                                                                                      
Sbjct 1407  QKPGSFSKLSKLLEVAKMPPESEVMTPKPNAGANGCTLSYQNSGKHSLGSVQSTATQSNVEKADSNNLFNTGSS  1480

Query  644  --------------------------------------------------------------------------  643
                                                                                      
Sbjct 1481  GPGKFYSPLPNDQLLKTLTEKNRQWFSLLPRTPCDDTSLTHADMSTASLVTPQSQPPSKSPSPTPAPLGSSAQN  1554

Query  644  --------------------------------------------------------------------------  643
                                                                                      
Sbjct 1555  PVGLNPFALSPLQVKGGVSMMGLQFCGWPTGVVTSNIPFTSSVPSLGSGLGLSEGNGNSFLTSNVASSKSESPV  1628

Query  644  --------------------------------------------------------------------------  643
                                                                                      
Sbjct 1629  PQNEKATSAQPAAVEVAKPVDFPSPKPIPEEMQFGWWRIIDPEDLKALLKVLHLRGIREKALQKQIQKHLDYIT  1702

Query  644  --------------------------------------------------------------------------  643
                                                                                      
Sbjct 1703  QACLKNKDVAIIELNENEENQVTRDIVENWSVEEQAMEMDLSVLQQVEDLERRVASASLQVKGWMCPEPASERE  1776

Query  644  --------------------------------------------------------------------------  643
                                                                                      
Sbjct 1777  DLVYFEHKSFTKLCKEHDGEFTGEDESSAHALERKSDNPLDIAVTRLADLERNIERRYLKSPLSTTIQIKLDNV  1850

Query  644  --------------------------------------------------------------------------  643
                                                                                      
Sbjct 1851  GTVTVPAPAPSVSGDGDGIEEDIAPGLRVWRRALSEARSAAQVALCIQQLQKSIAWEKSIMKVYCQICRKGDNE  1924

Query  644  --------------------------------------------------------------------------  643
                                                                                      
Sbjct 1925  ELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACIAKASGQTLKIKKLHVKGKKTNESKKGKKVTLTGDTEDE  1998

Query  644  --------------------------------------------------------------------------  643
                                                                                      
Sbjct 1999  DSASTSSSLKRGNKDLKKRKMEENTSINLSKQESFTSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNL  2072

Query  644  --------------------------------------------------------------------------  643
                                                                                      
Sbjct 2073  KLVPGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWTDTF  2146

Query  644  ---  643
               
Sbjct 2147  KVS  2149

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