Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11921
- Subject:
- XR_001753583.1
- Aligned Length:
- 2408
- Identities:
- 921
- Gaps:
- 1393
Alignment
Query 1 -------------------------------------ATGGCCTCAGCCTG--CCCAGGCTCTGA----TTTCA 31
|.|| ||||.|.| |.|||||||||| |||||
Sbjct 1 CCCAGACCATCCCCCAACACCTCCCTGAAATTCCTGCAAGG--TCAGGCCGATCTCAGGCTCTGACTCCTTTCA 72
Query 32 C----------------------------------------GTCTATCC-------------AT---------- 42
| |||| ||| ||
Sbjct 73 CTAGCCTTTCTGGTGATGTGATCTTACCCAGCTTCCTGTTTGTCT-TCCTGAGAGACAGTAGATTTAGAAAGTG 145
Query 43 ----TCAGAGG--------------------------------------------------------------- 49
|||||||
Sbjct 146 AGGATCAGAGGGTGGAAAATAAAAGCTGTGGTCCCCAGGAGTCCTGAACATCTGGGGACAGCGGGAAAACATGA 219
Query 50 ---------AGGAA------------CAGCTGAGAGGCCT--TGGA---------------------------- 72
||||| |||||| ||||| ||||
Sbjct 220 GTGACTCCAAGGAACCAAGGGTGCAGCAGCTG---GGCCTCCTGGAAGAAGATCCAACAACCAGTGGCATCAGA 290
Query 73 ----TTCCGACAGAC-------TCGAG--GAT--------ACAAGAGCT-TAGCAGTGTCCAAGGTCCCCAGCT 124
||||.|.|||| ||.|| ||| ||||||||| || |||||||||||||||||||||
Sbjct 291 CTTTTTCCAAGAGACTTTCAATTCCAGCAGATACATGGCCACAAGAGCTCTA-CAGTGTCCAAGGTCCCCAGCT 363
Query 125 CCATAAGTCAGGAACAATCCAGGCAAGACGCGATCTACCAGAACCTGACCCAGCTTAAAGCTGCAGTGGGTGAG 198
||.|||||||||||||||||..|||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 364 CCCTAAGTCAGGAACAATCCGAGCAAGACGCAATCTACCAGAACCTGACCCAGCTTAAAGCTGCAGTGGGTGAG 437
Query 199 CTCTCAGAGAAATCCAAGCTGCAGGAGATCTACCAGGAGCTGACCCAGCTGAAGGCTGCAGTGGGTGAGCTTCC 272
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|.||
Sbjct 438 CTCTCAGAGAAATCCAAGCTGCAGGAGATCTACCAGGAGCTGACCCAGCTGAAGGCTGCAGTGGGTGAGTTGCC 511
Query 273 AGAGAAATCTAAGCTGCAGGAGATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGA 346
|||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||.|.|||||||
Sbjct 512 AGAGAAATCCAAGCTGCAGGAGATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGA 585
Query 347 AATCTAAGCTGCAGGAGATCTACCAGGAGCTGACCTGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCT 420
||||.||||||||||||||||||||||||||||||.|||||||||||||||||||||||.|.|||||||||||.
Sbjct 586 AATCCAAGCTGCAGGAGATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCC 659
Query 421 AAGATGCAGGAGATCTACCAGGAGCTGACTCGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCA 494
|||.|||||||||||||||||||||||||.||||||||||||||||||||||||.|.|||||||||||.||||.
Sbjct 660 AAGCTGCAGGAGATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCT 733
Query 495 GCAGGAGATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCAGCAGG 568
||||||||||||||||||||||||...||||||||||||||||||||||.|.|||||||||||.||||.|||||
Sbjct 734 GCAGGAGATCTACCAGGAGCTGACGGAGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTGCAGG 807
Query 569 AGATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCAGCAGGAGATC 642
|||||||||||||||||||||.||||||||||||||||||||||.|.|||||..|.||.|||||||||.|.|||
Sbjct 808 AGATCTACCAGGAGCTGACCCAGCTGAAGGCTGCAGTGGGTGAGTTGCCAGACCAGTCCAAGCAGCAGCAAATC 881
Query 643 TA------------------------------------------------------------------------ 644
||
Sbjct 882 TATCAAGAACTGACCGATTTGAAGACTGCATTTGGTGAGTTCCTGCACATCAAGGGTCCTTGGGCCTGAGATGG 955
Query 645 -------------------------------------------------------------------------- 644
Sbjct 956 TCTCTGTGTGATGTGACTTTACTTGAGTTACCAACCCTGCCTGAGCCTCAGTTTCCTCCCCTGTGAAATGAGAA 1029
Query 645 ------------------------------------------CCAGG--------------------------- 649
|||||
Sbjct 1030 CACGGGGTAACTGCGATCATTGCACTTGGTGTTCACAGTGGGCCAGGCACACAGTAGACACTCAGTTCAACCAA 1103
Query 650 ---------------------------AGCTG------------------------------------------ 654
|||||
Sbjct 1104 TCCGCTGCCTTCTGTTCTGAGCTCTAAAGCTGCTAATTCTCCCAGTCTGGAAGAGATGGAGCCAGGACTCCTGG 1177
Query 655 -----------------------------------------------------------------------ACC 657
|||
Sbjct 1178 GTTCTCCTGGGGATCAGGGAGAGTCTTGGGAAGTAGGGAGAGGAATGGTCTCTCCCCATTCCAAGCGGTCCACC 1251
Query 658 CAGC-------------------------------------TGAAGGCT--GCAG---TG-------------- 675
||.| |||||||| |||| ||
Sbjct 1252 CAACATGGACAGTCAAGGAAGGGCCCTGATTTTCAAGGGCTTGAAGGCTGGGCAGATATGGGAATATGGACAAC 1325
Query 676 -------------------------------------GAACGCCTGTGCCACCCCTGTCCCTGGGAATGGACAT 712
|||||||||||||.||.|||||||..|||.|||||||
Sbjct 1326 CTAATCTGAGCCCAGCCCTGACCAGCCTCCCCCAACAGAACGCCTGTGCCGCCACTGTCCCAAGGACTGGACAT 1399
Query 713 TCTTCCAAGGAAACTGTTACTTCATGTCTAACTCCCAGCGGAACTGGCACGACTCCATCACCGCCTGCAAAGAA 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.|.|||
Sbjct 1400 TCTTCCAAGGAAACTGTTACTTCATGTCTAACTCCCAGCGGAACTGGCACGACTCCGTCACCGCCTGCCAGGAA 1473
Query 787 GTGGGGGCCCAGCTCGTCGTAATCAAAAGTGCTGAGGAGCAGAACTTCCTACAGCTGCAGTCTTCCAGAAGTAA 860
|||.||||||||||||||||||||||||.||||||||||
Sbjct 1474 GTGAGGGCCCAGCTCGTCGTAATCAAAACTGCTGAGGAG----------------------------------- 1512
Query 861 CCGCTTCACCTGGATGGGACTTTCAGATCTAAATCAGGAAGGCACGTGGCAATGGGTGGACGGCTCACCTCTGT 934
Sbjct 1513 -------------------------------------------------------------------------- 1512
Query 935 TGCCCAGCTTCAAGCAGTATTGGAACAGAGGAGAGCCCAACAACGTTGGGGAGGAAGACTGCGCGGAATTTAGT 1008
|||||||.|||.|||.||||||||.|||||.||||||||....|||.|.||||||||.||||||||||||
Sbjct 1513 ----CAGCTTCCAGCGGTACTGGAACAGTGGAGAACCCAACAATAGCGGGAATGAAGACTGTGCGGAATTTAGT 1582
Query 1009 GGCAATGGCTGGAACGACGACAAATGTAATCTTGCCAAATTCTGGATCTGCAAAAAGTCCGCAGCCTCCTGCTC 1082
||||.|||||||||||||.|...||||.|..|||.|||.|.||||||||||||||||.|||||| ||||||.
Sbjct 1583 GGCAGTGGCTGGAACGACAATCGATGTGACGTTGACAATTACTGGATCTGCAAAAAGCCCGCAG---CCTGCTT 1653
Query 1083 CAGGGATGAAGAACAGTTTCTTTCT-CCAGCCCCTGCCACC------------CCAAAC----CCCCCT----- 1134
|||.||.|||.|...||||| .|| |.||||.|.|||.|| |..||| |||.||
Sbjct 1654 CAGAGACGAATAGTTGTTTC--CCTGCTAGCCTCAGCCTCCATTGTGGTATAGCAGAACTTCACCCACTTGTAA 1725
Query 1135 -CCTGCG------------------------------------------------------------------- 1140
||.|||
Sbjct 1726 GCCAGCGCTTCTTCTCTCCATCCTTGGACCTTCACAAATGCCCTGAGACGGTTCTCTGTTCGATTTTTCATCCC 1799
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1800 CTATGAACCTGGGTCTTATTCTGTCCTTCTGATGCCTCCAAGTTTCCCTGGTGTAGAGCTTGTGTTCTTGGCCC 1873
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1874 ATCCTTGGAGCTTTATAAGTGACCTGAGTGGGATGCATTTAGGGGGCGGGCTTGGTATGTTGTATGAATCCACT 1947
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1948 CTCTGTTCCTTTTGGAGATTAGACTATTTGGATTCATGTGTAGCTGCCCTGTCCCCTGGGGCTTTATCTCATCC 2021
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2022 ATGCAAACTACCATCTGCTCAACTTCCAGCTACACCCCGTGCACCCTTTTGACTGGGGACTTGCTGGTTGAAGG 2095
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2096 AGCTCATCTTGCAGGCTGGAAGCACCAGGGAATTAATTCCCCCAGTCAACCAATGGCATCCAGAGAGGGCATGG 2169
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2170 AGGCTCCATACAACCTCTTCCACCCCCACATCTTTCTTTGTCCTATACATGTCTTCCATTTGGCTGTTTCTGAG 2243
Query 1141 ---------------------------------------- 1140
Sbjct 2244 TTGTAGCCTTTATAATAAAGTGGTAAATGTTGTAACTGCA 2283
