Nucleotide Global Alignment

Description

• Query: ccsbBroad304_11921
• Subject: XR_936147.2
• Aligned Length: 1413
• Identities: 1003
• Gaps: 294

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACCCAGCTTCCTGTTTGTCTTCCTGAGAGACAGTAGATTTAGAAAGTGAGGATCAGAGGGTGGAAAATAAAAGC  74

Query    1  -ATGGCCTCAGCCTGCCCAGG---CTCTGATTTCACGTCT-------------ATCCAT-------TCAGAGGA  50
             .|||        |.||||||   | ||||    ||.|||             |..|||       ||..||||
Sbjct   75  TGTGG--------TCCCCAGGAGTC-CTGA----ACATCTGGGGACAGCGGGAAAACATGAGTGACTCCAAGGA  135

Query   51  ---------GGAACAGCTGAGAGGCCT--TGGA--------------------------------TTCCGACAG  81
                     |.|.||||||   |||||  ||||                                ||||.|.||
Sbjct  136  ACCAAGGGTGCAGCAGCTG---GGCCTCCTGGAAGAAGATCCAACAACCAGTGGCATCAGACTTTTTCCAAGAG  206

Query   82  AC-------TCGAG--GAT--------ACAAGAG-------------CTTAGC---------------------  104
            ||       ||.||  |||        |||||||             |||.||                     
Sbjct  207  ACTTTCAATTCCAGCAGATACATGGCCACAAGAGCTCTACAGGGTGTCTTGGCCATGGCGCCCTGGTGCTGCAA  280

Query  105  --------------------------------------------------AGTGTCCAAGGTCCCCAGCTCCAT  128
                                                              ||||||||||||||||||||||.|
Sbjct  281  CTCCTCTCCTTCATGCTCTTGGCTGGGGTCCTGGTGGCCATCCTTGTCCAAGTGTCCAAGGTCCCCAGCTCCCT  354

Query  129  AAGTCAGGAACAATCCAGGCAAGACGCGATCTACCAGAACCTGACCCAGCTTAAAGCTGCAGTGGGTGAGCTCT  202
            ||||||||||||||||..|||||||||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  355  AAGTCAGGAACAATCCGAGCAAGACGCAATCTACCAGAACCTGACCCAGCTTAAAGCTGCAGTGGGTGAGCTCT  428

Query  203  CAGAGAAATCCAAGCTGCAGGAGATCTACCAGGAGCTGACCCAGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAG  276
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|.||||||
Sbjct  429  CAGAGAAATCCAAGCTGCAGGAGATCTACCAGGAGCTGACCCAGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAG  502

Query  277  AAATCTAAGCTGCAGGAGATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATC  350
            |||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||.|.|||||||||||
Sbjct  503  AAATCCAAGCTGCAGGAGATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATC  576

Query  351  TAAGCTGCAGGAGATCTACCAGGAGCTGACCTGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGA  424
            .||||||||||||||||||||||||||||||.|||||||||||||||||||||||.|.|||||||||||.|||.
Sbjct  577  CAAGCTGCAGGAGATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGC  650

Query  425  TGCAGGAGATCTACCAGGAGCTGACTCGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCAGCAG  498
            |||||||||||||||||||||||||.||||||||||||||||||||||||.|.|||||||||||.||||.||||
Sbjct  651  TGCAGGAGATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTGCAG  724

Query  499  GAGATCTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCAGCAGGAGAT  572
            ||||||||||||||||||||...||||||||||||||||||||||.|.|||||||||||.||||.|||||||||
Sbjct  725  GAGATCTACCAGGAGCTGACGGAGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTGCAGGAGAT  798

Query  573  CTACCAGGAGCTGACCCGGCTGAAGGCTGCAGTGGGTGAGCTTCCAGAGAAATCTAAGCAGCAGGAGATCTACC  646
            |||||||||||||||||.||||||||||||||||||||||.|.|||||..|.||.|||||||||.|.|||||.|
Sbjct  799  CTACCAGGAGCTGACCCAGCTGAAGGCTGCAGTGGGTGAGTTGCCAGACCAGTCCAAGCAGCAGCAAATCTATC  872

Query  647  AGGAGCTGACCCAGCTGAAGGCTGCAGTGGAACGCCTGTGCCACCCCTGTCCCTGGGAATGGACATTCTTCCAA  720
            |.||.||||||.|..|||||.|||||.|.|||||||||||||.||.|||||||..|||.|||||||||||||||
Sbjct  873  AAGAACTGACCGATTTGAAGACTGCATTTGAACGCCTGTGCCGCCACTGTCCCAAGGACTGGACATTCTTCCAA  946

Query  721  GGAAACTGTTACTTCATGTCTAACTCCCAGCGGAACTGGCACGACTCCATCACCGCCTGCAAAGAAGTGGGGGC  794
            ||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.|.||||||.||||
Sbjct  947  GGAAACTGTTACTTCATGTCTAACTCCCAGCGGAACTGGCACGACTCCGTCACCGCCTGCCAGGAAGTGAGGGC  1020

Query  795  CCAGCTCGTCGTAATCAAAAGTGCTGAGGAGCAGAACTTCCTACAGCTGCAGTCTTCCAGAAGTAACCGCTTCA  868
            ||||||||||||||||||||.|||||||||||||||||||||||||||||||.|||||||.||||||||||||.
Sbjct 1021  CCAGCTCGTCGTAATCAAAACTGCTGAGGAGCAGAACTTCCTACAGCTGCAGACTTCCAGGAGTAACCGCTTCT  1094

Query  869  CCTGGATGGGACTTTCAGATCTAAATCAGGAAGGCACGTGGCAATGGGTGGACGGCTCACCTCTGTTGCCCAGC  942
            |||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||..||||||
Sbjct 1095  CCTGGATGGGACTTTCAGACCTAAATCAGGAAGGCACGTGGCAATGGGTGGACGGCTCACCTCTGTCACCCAGC  1168

Query  943  TTCAAGCAGTATTGGAACAGAGGAGAGCCCAACAACGTTGGGGAGGAAGACTGCGCGGAATTTAGTGGCAATGG  1016
            |||.|||.|||.||||||||.|||||.||||||||....|||.|.||||||||.||||||||||||||||.|||
Sbjct 1169  TTCCAGCGGTACTGGAACAGTGGAGAACCCAACAATAGCGGGAATGAAGACTGTGCGGAATTTAGTGGCAGTGG  1242

Query 1017  CTGGAACGACGACAAATGTAATCTTGCCAAATTCTGGATCTGCAAAAAGTCCGCAGCCTCCTGCTCCAGGGATG  1090
            ||||||||||.|...||||.|..|||.|||.|.||||||||||||||||.||||||   ||||||.|||.||.|
Sbjct 1243  CTGGAACGACAATCGATGTGACGTTGACAATTACTGGATCTGCAAAAAGCCCGCAG---CCTGCTTCAGAGACG  1313

Query 1091  AAGAACAGTTTCTTTCT-CCAGCCCCTGCCACC------------CCAAAC--CCCCCTCCTGCG---------  1140
            ||.|...|||||  .|| |.||||.|.|||.||            |..|||  |.|||.|.|||.         
Sbjct 1314  AATAGTTGTTTC--CCTGCTAGCCTCAGCCTCCATTGTGGTATAGCAGAACTTCACCCACTTGCTGGAGTGCAA  1385

Query 1141  -------  1140
                   
Sbjct 1386  TGGCACG  1392