Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11963
- Subject:
- XR_001751299.2
- Aligned Length:
- 2549
- Identities:
- 675
- Gaps:
- 1874
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAAGTTAAGAGTGGCGCCAGGGATTTGAACCGCGCTGACGAAGTTTGGTGATCCATCTTCCGAGTATCGCCGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATTTCGAATCGCGATGATCATCCCCTCTCTAGAGGAGCTGGACTCCCTCAAGTACAGTGACCTGCAGAACTTAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCAAGAGTCTGGGTCTCCGGGCCAACCTGAGGGCAACCAAGTTGTTAAAAGCCTTGAAAGGCTACATTAAACAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGGCAAGAAAAGGAAATGAGAATCAGGATGAAAGTCAAACTTCTGCATCCTCTTGTGATGAGACTGAGATACA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GATCAGCAACCAGGAAGAAGCTGAGAGACAGCCACTTGGCCATGTCACCAAAACAAGGAGAAGGTGCAAGACTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCGTGTGGACCCTGACTCACAGCAGAATCATTCAGAGATAAAAATAAGTAATCCCACTGAATTCCAGAATCAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAAAAGCAGGAAAGCCAGGATCTCAGAGCTACTGCAAAAGTTCCTTCTCCACCAGACGAGCACCAAGAAGCTGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAATGCTGTTTCCTCAGGTAACAGAGATTCAAAGGTACCTTCAGAAGGAAAGAAATCTCTCTACACAGATGAGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CATCCAAACCTGGAAAAAATAAAAGAACTGCAATCACTACTCCAAACTTTAAGAAGCTTCATGAAGCTCATTTT 666
Query 1 ------------------------------------------------------------------ATGAATGA 8
||||||||
Sbjct 667 AAGGAAATGGAGTCCATTGATCAATATATTGAGAGAAAAAAGAAACATTTTGAAGAACACAATTCCATGAATGA 740
Query 9 ACTGA---AGCAGCCCATCAATAAGGGAGGGGTCAGGACTCCAGTACCTCCAAGAGGAAGACTCTCTGTGGCTT 79
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACTGAAGCAGCAGCCCATCAATAAGGGAGGGGTCAGGACTCCAGTACCTCCAAGAGGAAGACTCTCTGTGGCTT 814
Query 80 CTACTCCCATCAGCCAACGACGCTCGCAAGGCCGGTCTTGTGGCCCTGCAAGTCAGAGTACCTTGGGTCTGAAG 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTACTCCCATCAGCCAACGACGCTCGCAAGGCCGGTCTTGTGGCCCTGCAAGTCAGAGTACCTTGGGTCTGAAG 888
Query 154 GGGTCACTCAAGCGCTCTGCTATCTCTGCAGCTAAAACGGGTGT------------------------------ 197
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GGGTCACTCAAGCGCTCTGCTATCTCTGCAGCTAAAACGGGTGTCAGGTAAAGAAATCACTCCAAAATGTAATC 962
Query 198 -------------------------------------------------------------------------- 197
Sbjct 963 ATGAACAAGATTTCACATGGACTATATAAAAAAAAAATTTTTAATTGGCAAATAATATTCGTACATACTCATAG 1036
Query 198 -------------------------------------------------------------------------- 197
Sbjct 1037 GGTACATAGTGATGTTTCTTTTCTTTTCTTTTTCTTTTTTTTTTTTTTGAGATGAGGTCTCGCTCTGTCGCCCA 1110
Query 198 -------------------------------------------------------------------------- 197
Sbjct 1111 GGCTGGAGTGCAGTGGCGCAATCTCAGCTCCCTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTTCTGCCTCA 1184
Query 198 ----------------------CAGGTTTTCAGCTGCTACTAAAGATAATGAGCATAAGCGTTCACTGACCAAG 249
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GCCTCCCGAGTAGCTGGGACTACAGGTTTTCAGCTGCTACTAAAGATAATGAGCATAAGCGTTCACTGACCAAG 1258
Query 250 ACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCTGGGGGCACCCCAAAAGGCGAGGCTGTGCTTGGGACACA 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ACTCCAGCCAGAAAGTCTGCACATGTGACCGTGTCTGGGGGCACCCCAAAAGGCGAGGCTGTGCTTGGGACACA 1332
Query 324 CAAATTAAAGACCATCACGGGGAATTCTGCTGCTGTTATTACCCCATTCAAGTTGACAACTGAGGCAACGCAGA 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CAAATTAAAGACCATCACGGGGAATTCTGCTGCTGTTATTACCCCATTCAAGTTGACAACTGAGGCAACGCAGA 1406
Query 398 CTCCAGTCTCCAATAAGAAACCAGTGTTTGATCTTAAAGCAAGTTTGTCTCGTCCCCTCAACTATGAACCACAC 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CTCCAGTCTCCAATAAGAAACCAGTGTTTGATCTTAAAGCAAGTTTGTCTCGTCCCCTCAACTATGAACCACAC 1480
Query 472 AAAGGAAAGCTAAAACCATGGGGGCAATCTAAAGAAAATAATTATCTAAATCAACATGTCAACAGAATTAACTT 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AAAGGAAAGCTAAAACCATGGGGGCAATCTAAAGAAAATAATTATCTAAATCAACATGTCAACAGAATTAACTT 1554
Query 546 CTACAAGAAAACTTACAAACAACCCCATCTCCAGACAAAGGAAGAGCAACGGAAGAAACGCGAGCAAGAACGAA 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CTACAAGAAAACTTACAAACAACCCCATCTCCAGACAAAGGAAGAGCAACGGAAGAAACGCGAGCAAGAACGAA 1628
Query 620 AGGAGAAGAAAGCAAAGGTTTTGGGAATGCGAAGGGGCCTCATTTTGGCTGAAGAT------------------ 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AGGAGAAGAAAGCAAAGGTTTTGGGAATGCGAAGGGGCCTCATTTTGGCTGAAGATTAATAATTTTTTAACATC 1702
Query 676 -------------------------------------------------------------------------- 675
Sbjct 1703 TTGTAAATATTCCTGTATTCTCAACTTTTTTCCTTTTGTAAATTTTTTTTTTTTGCTGTCATCCCCACTTTAGT 1776
Query 676 -------------------------------------------------------------------------- 675
Sbjct 1777 CACGAGATCTTTTTCTGCTAACTGTTCATAGTCTGTGTAGTGTCCATGGGTTCTTCATGTGCTATGATCTCTGA 1850
Query 676 -------------------------------------------------------------------------- 675
Sbjct 1851 AAAGACGTTATCACCTTAAAGCTCAAATTCTTTGGGATGGTTTTTACTTAAGTCCATTAACAATTCAGGTTTCT 1924
Query 676 -------------------------------------------------------------------------- 675
Sbjct 1925 AACGAGACCCATCCTAAAATTCTGTTTCTAGATTTTTAATGTCAAGTTCCCAAGTTCCCCCTGCTGGTTCTAAT 1998
Query 676 -------------------------------------------------------------------------- 675
Sbjct 1999 ATTAACAGAACTGCAGTCTTCTGCTAGCCAATAGCATTTACCTGATGGCAGCTAGTTATGCAAGCTTCAGGAGA 2072
Query 676 -------------------------------------------------------------------------- 675
Sbjct 2073 ATTTGAACAATAACAAGAATAGGGTAAGCTGGGATAGAAAGGCCACCTCTTCACTCTCTATAGAATATAGTAAC 2146
Query 676 -------------------------------------------------------------------------- 675
Sbjct 2147 CTTTATGAAACGGGGCCATATAGTTTGGTTATGACATCAATATTTTACCTAGGTGAAATTGTTTAGGCTTATGT 2220
Query 676 -------------------------------------------------------------------------- 675
Sbjct 2221 ACCTTCGTTCAAATATCCTCATGTAATTGCCATCTGTCACTCACTATATTCACAAAAATAAAACTCTACAACTC 2294
Query 676 -------------------------------------------------------------------------- 675
Sbjct 2295 ATTCTAACATTGCTTACTTAAAAGCTACATAGCCCTATCGAAATGCGAGGATTAATGCTTTAATGCTTTTAGAG 2368
Query 676 -------------------------------------------------------------------------- 675
Sbjct 2369 ACAGGGTCTCACTGTGTTGCCCAGGCTGGTCTCAAACTCCACCAAATGTACTTCTTATTCATTTTATGGAAAAG 2442
Query 676 -------------------------------------------------------------------------- 675
Sbjct 2443 ACTAGGCTTTGCTTAGTATCATGTCCATGTTTCCTTCACCTCAGTGGAGCTTCTGAGTTTTATACTGCTCAAGA 2516
Query 676 --------------------------------- 675
Sbjct 2517 TCGTCATAAATAAAATTTTTTCTCATTGTCATA 2549
