Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11975
Subject:
NM_001288812.1
Aligned Length:
551
Identities:
287
Gaps:
247

Alignment

Query   1  ---------------------------------------------------ATGCGGATTCTTATATTGAGTTT  23
                                                              |||||||||||||||||||||||
Sbjct   1  ATGGGAAACATTTTTGAAAAGCTCTTTAAAAGTCTACTTGGGAAAAAAAAGATGCGGATTCTTATATTGAGTTT  74

Query  24  GGATACAGCTGGAAAAACCACCATCTTGTATAAATTGAAGCTGGGGGAGACTGTGCCTGCCGTCCCTACAGTAG  97
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  75  GGATACAGCTGGAAAAACCACCATCTTGTATAAATTGAAGCTGGGGGAGACTGTGCCTGCCGTCCCTACAGTAG  148

Query  98  GTTTCTGTGTGGAGACAGTAGAATATAAAAATAACACCTTCGCTGTCTGGGATGTTGGCAGCCACTTCAAAATC  171
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149  GTTTCTGTGTGGAGACAGTAGAATATAAAAATAACACCTTCGCTGTCTGGGATGTTGGCAGCCACTTCAAAATC  222

Query 172  AGACCTCTGTGGCAGCATTTTTTCCAGAACACAAAAGGTGC---CAGAAGCCCAGGAAGCACA---CATCAAGG  239
           |||||||||||||||||||||||||||||||||||| |.||   |||...|||||...|||||   ||||||| 
Sbjct 223  AGACCTCTGTGGCAGCATTTTTTCCAGAACACAAAA-GAGCTATCAGCTTCCCAGTTTGCACAATTCATCAAG-  294

Query 240  CTCACTTGCCA-GCGGGGTGCTGCCA-----ATAAA--ATGTAG---TCACGTGGAA--TTTGGAATGTGGAAA  300
             .|.||   | |||||||     ||     |.|||  ||| ||   ||.|.|||||  ||   ||        
Sbjct 295  --AAATT---ATGCGGGGT-----CACCGGCACAAATGATG-AGGCATCTCCTGGAAGCTT---AA--------  346

Query 301  GGAGGTAGAAGTCATCCTTTCC-TCCCCCATAGCAGCAGGTGTGCAGGCTCTGGTGGTCAGCTGGACTCCATAC  373
                       |.||.|.||| |  |||||                 ||||  |||.|||.            
Sbjct 347  ------------CTTCTTATCCAT--CCCAT-----------------CTCT--TGGACAGA------------  375

Query 374  TCCCCCACCAGTCACCAGCCTGGGGACCGTGGGGCTGCAAGGACCTCAGCAGCGGTTTCCCAAGTTTCCTGACT  447
                                                                                     
Sbjct 376  --------------------------------------------------------------------------  375

Query 448  TCTTCCATCCTCTGGAAATCAGCTGTGGTAAAG  480
                                            
Sbjct 376  ---------------------------------  375