Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11975
- Subject:
- XR_001756625.2
- Aligned Length:
- 1151
- Identities:
- 407
- Gaps:
- 703
Alignment
Query 1 ------------------------ATGCGGA----------TTC-TTATATTGAGTTTGGATACA--GCTGGAA 37
.|||.|| ||| ||..|.||| |.||| .|.|.||
Sbjct 1 AAGTTTTCTCCAATACTATATGGCCTGCAGACCGCTCAGCTTTCATTCCAGTGA------AAACATTCCAGAAA 68
Query 38 AAACCACCATCTTGTATAAAT------TG----------AAGCTGGGGGAGACTGTG-----CCTGCCGTCC-- 88
|||| || ||.||.||| || .||||..||..||.|||| |||||.|.||
Sbjct 69 AAAC-----TC-TGAATCAATCCCAGGTGTTTCTCCAATCAGCTCAGGATGATTGTGTGTTACCTGCTGCCCAG 136
Query 89 ------------CTACAG--------------TAGGTTTCTGTGTGGAGACA-------GTAGA---------- 119
||.||| |||||.||..||| || |||||
Sbjct 137 CTAGTGACACCTCTCCAGGCCTCTGACTTAGCTAGGTCTCCATGT-----CACTCCACCGTAGACTCCCCGCCT 205
Query 120 -----ATATAAAAA-------------TAACACCTTCGCTGTC-----TGGG-ATGTTGGCA-GCCACTTCAAA 168
.|.|..||| .|||||||.| | |||| |.|.||.|| |.|||.||.||
Sbjct 206 TCTTCTTTTGCAAAGCCTCGGACACCCAAACACCTAC-----CAAAAGTGGGTAGGGTGCCAGGACACCTCCAA 274
Query 169 ------------------ATCAGACCT--CTGTG----------GCAG----------------------CATT 190
|.||.|||| .|||| |||| ||||
Sbjct 275 GTGTAAGTGGGGCTCTCCAGCACACCTGGATGTGGAGGTGTGATGCAGAGTGGTGGCTGCTCGTGACACTCATT 348
Query 191 T------TTTC----CAGAACACAAAAGGTGCCAGAAGCCCAGGAAGCACACATCAAGGCTCACTTGCCAGCGG 254
| |||| | ||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 349 TCACCCCTTTCTGTGC----------AGGTGCCAGAAGCCCAGGAAGCACACATCAAGGCTCGCTTGCCAGCGG 412
Query 255 GGTGCTGCCAATAAAATGTAGTCACGTGGAATTTGGAATGTGGAAAGGAGGTAGAAGTCATCCTTTCCTCCCCC 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 413 GGTGCTGCCAATAAAATGTAGTCACGTGGAATTTGGAATGTGGAAAGGAGGTAGAAGTCATCCTTTCCTCCCCC 486
Query 329 ATAGCAGCAGGTGTGCAGGCTCTGGTGGTCAGCTGGACTCCATACTCCCCCACCAGTCACCAGCCTGGGGACCG 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 487 ATAGCAGCAGGTGTGCAGGCTCTGGTGGTCAGCTGGACTCCATACTCCCCCACCAGTCACCAGCCTGGGGACCG 560
Query 403 TGGGGCTGCAAGGACCTCAGCAGCGGTTTCCCAAGTTTCCTGACTTCTTCCATCCTCTGGAAATCAGCTGTGGT 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 561 TGGGGCTGCAAGGACCTCAGCAGCGGTTTCCCAAGTTTCCTGACTTCTTCCATCCTCTGGAAATCAGCTGTGGT 634
Query 477 ---AAAG------------------------------------------------------------------- 480
..||
Sbjct 635 TCGTGAGCCACACATCTCCCCACACCAAGCTCCTCCATACAAGACCTCGGACTGCATCATGTAAATGCTTTTTC 708
Query 481 -------------------------------------------------------------------------- 480
Sbjct 709 AGGGGCAAAATCTAGAGAATCTGAAATGAGCTATCAGCTTCCCAGTTTGCACAATTCATCAAGAAATTATGCGG 782
Query 481 -------------------------------------------------------------------------- 480
Sbjct 783 GGTCACTGGCACAAATGATGAGGCATCTCCTGGAAGCTTAACTTCTTATCCATCCCATCTCTTGGACAGATGAT 856
Query 481 -------------------------------------------------------------------------- 480
Sbjct 857 GCCAGTTAATTACTTTGAATGCTCCTCCACCAAGCCAAGGCCAGACTCCTGCAATCATAGGATGGCAACACCAC 930
Query 481 -------------------------------------------------------------------------- 480
Sbjct 931 CTCTAAAGCACAGAACTTCAGGCTTTGCTTCGGAAGTGGCACCATGGTCTCTTCATTTTCCCTTTCTTCAAGGT 1004
Query 481 -------------------------------------------------------------------------- 480
Sbjct 1005 CAGAAAACTGAAGCTGTTAGGAGTTTTAGTGTTAAGTTCCTTCCGAGGATGTTAATTAGGCTTCAAACTGTTTT 1078
Query 481 ----------------------------------------- 480
Sbjct 1079 GTTCTGAGAAATAAAAACTAAACTCCAGTCATTCAAGCTAA 1119