Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11975
Subject:
XR_934913.3
Aligned Length:
1933
Identities:
405
Gaps:
1489

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACTCCGTCGAAAAAAAAAAAAAGAAAGAAAGAAAAAAGCTGCAATCAAATGGCCCACCCATCTGATGCCGGGTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTCAGGATTCAGAGAAAATGTGTACCAAAAAGCCCCCAGGAAACCATAAATGCTGAGCATAGGACTTGGGTGCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TCTGGAATGTCCTTCTGCCTCAGCTACTCTGAGATAACATGGTCCCCTGTGTTCATGGAACCCAGATGGCCAAA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGTCAATGATCCAGCACTTATAAGAAAAGAAAGCGATTCAAGAGCCTCTGTACCCACCTAGGCCTCAGCCTCCC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CAGGACCTACTCACCTATACTCTTCACAACAGGTAACGTTGCCTCTGGCACCCATCATATCCCCTGAATTCAGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATCAGGACTGATCTGCCATCAGCTCTGGCAGGGAGAGTCCCTTACAAGTGCCAAGAAAAGGAACATGAACAATA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TTCTGTGACCACAGCCAACACCACACAGAACTTCCCAGAAGCTCTCCAGGGCGAGAACACCAACCAGAAGGAAG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TGACAGCTTCCATCATTCTGTGCTAAGTGAGCTGAGTGAGTGGCCATCTCTCACCTTCCAGATATTTGAATGAT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ACCTACCATTCCAGCAGCCAGCACAAGTCATTTAATATGAATGCCAGAAACACAATCCCTGAGGACAGGTACAG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GAGACCAGATGCCAGGAAAAACCCCGGCCCCACCCAAGAGTTGGGGAGAGCCCACTGCTCCTCCACCCTTATTT  740

Query    1  ----------------------------------------------ATGCGGATTCTTATATTGAG--------  20
                                                          .||||| .|||  .|.||||        
Sbjct  741  ACCACCTGAGCCCCTGCACCCGCCAATCATGCTGCTCAGTCTGTAACTGCGG-GTCT--GAGTGAGCACCTACA  811

Query   21  TTTGGAT--------ACAGCTGGAAAA-----------AC----CACCA-----TCTTGTATAAATTGAAGCTG  66
            |||||.|        .|||||||...|           ||    |||.|     ||..|| |.|||.|.||.||
Sbjct  812  TTTGGCTGTTGAGGGGCAGCTGGTGGAGTTGGCAGGCGACTCTGCACTAAGTTCTCAGGT-TGAATGGGAGTTG  884

Query   67  G-----GGGA--GACTGTGCCTGCCGTCCCTACAG---TAG--------GTTTCTGTG----------------  106
            |     ||||  ||.||     |.||      |||   |||        |||.|.|||                
Sbjct  885  GGTCGAGGGAAGGAATG-----GACG------CAGAGTTAGGGTGAAGAGTTGCGGTGGGTCAGCGGGGGTGAA  947

Query  107  ------TGGAGA---CAGTAGAATATAAAAATAACACCTTCGCTGTCTGGGATGTT---------GGCAGC---  159
                  ||||||   ||.|    |.|||.||.|     ||.|.||   .||.||.|         ||||||   
Sbjct  948  AGGACATGGAGATGTCATT----TTTAACAAGA-----TTGGGTG---AGGGTGGTAGGAAAGGAGGCAGCAAG  1009

Query  160  ---------CACTT---CAAAATCAGA----------------CCTCTGT--GGCAG-----------------  186
                     ||.||   |||    |||                ||||.||  |||||                 
Sbjct 1010  AGTTCGGGACAGTTTGGCAA----AGACTTAGGGATGGGGTGTCCTCAGTACGGCAGGAGACGCAAAGGAAGGT  1079

Query  187  ---CATT-------------------------------------------------------------TTTTCC  196
               ||.|                                                             ||.|||
Sbjct 1080  ATACAGTGGGCTAGGAGACTAAGGACGAGAAGACACAGTTACGACTTGGAATAAGGCTGAGATCGGAGTTATCC  1153

Query  197  AGAACACAAAAGGTGCCAGAAGCCCAGGAAGCACACATCAAGGCTCACTTGCCAGCGGGGTGCTGCCAATAAAA  270
            ||||.| ||..|||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 1154  AGAAGA-AAGCGGTGCCAGAAGCCCAGGAAGCACACATCAAGGCTCGCTTGCCAGCGGGGTGCTGCCAATAAAA  1226

Query  271  TGTAGTCACGTGGAATTTGGAATGTGGAAAGGAGGTAGAAGTCATCCTTTCCTCCCCCATAGCAGCAGGTGTGC  344
            ||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1227  TGTAGTCACGTGGAATTTGGGATGTGGAAAGGAGGTAGAAGTCATCCTTTCCTCCCCCATAGCAGCAGGTGTGC  1300

Query  345  AGGCTCTGGTGGTCAGCTGGACTCCATACTCCCCCACCAGTCACCAGCCTGGGGACCGTGGGGCTGCAAGGACC  418
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1301  AGGCTCTGGTGGTCAGCTGGACTCCATACTCCCCCACCAGTCACCAGCCTGGGGACCGTGGGGCTGCAAGGACC  1374

Query  419  TCAGCAGCGGTTTCCCAAGTTTCCTGACTTCTTCCATCCTCTGGAAATCAGCTGTGGTAAAG------------  480
            ||||||||.|||||||||||||||||||||||||||||||||||||||||||||||    ||            
Sbjct 1375  TCAGCAGCAGTTTCCCAAGTTTCCTGACTTCTTCCATCCTCTGGAAATCAGCTGTG----AGCTATCAGCTTCC  1444

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1445  CAGTTTGCACAATTCATCAAGAAATTATGCGGGGTCACTGGCACAAATGATGAGGCATCTCCTGGAAGCTTAAC  1518

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1519  TTCTTATCCATCCCATCTCTTGGACAGATGATGCCAGTTAATTACTTTGAATGCTCCTCCACCAAGCCAAGGCC  1592

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1593  AGACTCCTGCAATCATAGGATGGCAACACCACCTCTAAAGCACAGAACTTCAGCCTTTGCTTCGGAAGTGGCAC  1666

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1667  CATGGTCTCTTCATTTTCCCTTTCTTCAAGGCAAGTTTGAAAACCACTGCTTTAAAGAAAATGGATACTCCCCT  1740

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1741  TACCAAGCAGAAAGTAGGATTTTGGAAACTGATGCAAGGGAAGCAAAAAAGATGCCTCAGGAGGCACGATTACA  1814

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1815  ACAGGATTGATGCAAACGGAAGCTGAAGCTTAACCAAAGACATTAATGTACGCCCACAAAAGAAACTGCTAAGG  1888

Query  481  ---------  480
                     
Sbjct 1889  AAGTCAAGT  1897

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