Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11984
- Subject:
- XR_002957336.1
- Aligned Length:
- 2854
- Identities:
- 1414
- Gaps:
- 1440
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGAGGGGGGCTGCTAAATGCAACATCTTCAGGCCATTACAACGTGCGATATGAATTTTTTTTTTGCTGGGCGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCTGTGAAGCTCAGAACGAGGACATGAGTCAAGAAGAGTTTTCTTTCTAGGTCAATAGGAGGAACTGGTCTCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGGCAAGGAGTGGAAGCCAACAGGAGCAAAAGTAATTGGGGCCTCCTATGGAGGAACTCTGCCAAAAGGAAAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGCTTGGATTTGCCATCTCAGGAATGGAAGAAGGGGGCGGAGACCCTTTGGGGCTTTTGTGCCCAGTGGGCCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCCGAAAAGCTCGCACTTTACAGAGGCGGCAAGACTAGGGTGGAGGAAAGCTCAAGGGCCATCGCTGGGTGCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCGGTGGCGGGCAGAAACGGGACTGGCAGTGCCCACACGTGTGCGTTCTCCCCGTCCGCCCGAAGGAGCTACCT 444
Query 1 ----------------------------------------ATGGCTGACTCAGAAGCACTCCCCTCCCTTGCTG 34
||||||||||||||||||||||||||||||||||
Sbjct 445 GTGCACCCTGCCTCCGGCTCTCCTGAGCAGAGAGATCCTGATGGCTGACTCAGAAGCACTCCCCTCCCTTGCTG 518
Query 35 GGGACCCAGTGGCTGTGGAAGCCTTGCTCCGGGCCGTGTTTGGGGTTGTTGTGGATGAGGCCATTCAGAAAGGA 108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GGGACCCAGTGGCTGTGGAAGCCTTGCTCCGGGCCGTGTTTGGGGTTGTTGTGGATGAGGCCATTCAGAAAGGA 592
Query 109 ACCAGTGTCTCCCAGAAGGTCTGTGAGTGGAAGGAGCCTGAGGAGCTGAAGCAGCTGCTGGATTTGGAGCTGCG 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ACCAGTGTCTCCCAGAAGGTCTGTGAGTGGAAGGAGCCTGAGGAGCTGAAGCAGCTGCTGGATTTGGAGCTGCG 666
Query 183 GAGCCAGGGCGAGTCACAGAAGCAGATCCTGGAGCGGTGTCGGGCTGTGATTCGCTACAGTGTCAAGACTGGTC 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAGCCAGGGCGAGTCACAGAAGCAGATCCTGGAGCGGTGTCGGGCTGTGATTCGCTACAGTGTCAAGACTGGTC 740
Query 257 ACCCTCGGTTCTTCAACCAGCTCTTCTCTGGGTTGGATCCCCATGCTCTGGCCGGGCGCATTATCACTGAGAGC 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACCCTCGGTTCTTCAACCAGCTCTTCTCTGGGTTGGATCCCCATGCTCTGGCCGGGCGCATTATCACTGAGAGC 814
Query 331 CTCAACACCAGCCAGTACACATATGAAATCGCCCCCGTGTTTGTGCTCATGGAAGAGGAGGTGCTGAGGAAACT 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTCAACACCAGCCAGTACACATATGAAATCGCCCCCGTGTTTGTGCTCATGGAAGAGGAGGTGCTGAGGAAACT 888
Query 405 GCGGGCCCTGGTGGGCTGGAGCTCTGGGGACGGAATCTTCTGCCCTGGTGGCTCCATCTCCAACATGTATGCTG 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GCGGGCCCTGGTGGGCTGGAGCTCTGGGGACGGAATCTTCTGCCCTGGTGGCTCCATCTCCAACATGTATGCTG 962
Query 479 TAAATCTGGCCCGCTATCAGCGCTACCCGGATTGCAAGCAGAGGGGCCTCCGCACACTGCCGCCCCTGGCCCTA 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TAAATCTGGCCCGCTATCAGCGCTACCCGGATTGCAAGCAGAGGGGCCTCCGCACACTGCCGCCCCTGGCCCTA 1036
Query 553 TTCACATCGAAGGAGTGTCACTACTCCATCCAGAAGGGAGCTGCGTTTCTGGGACTTGGCACCGACAGTGTCCG 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TTCACATCGAAGGAGTGTCACTACTCCATCCAGAAGGGAGCTGCGTTTCTGGGACTTGGCACCGACAGTGTCCG 1110
Query 627 AGTGGTCAAGGCTGATGAGAGAGGGAAAATGGTCCCCGAGGATCTGGAGAGGCAGATTGGTATGGCCGAGGCTG 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AGTGGTCAAGGCTGATGAGAGAGGGAAAATGGTCCCCGAGGATCTGGAGAGGCAGATTGGTATGGCCGAGGCTG 1184
Query 701 AG----------------------------------------GGTGCTGTGCCGTTCCTGGTCAGTGCCACCTC 734
|| ||||||||||||||||||||||||||||||||
Sbjct 1185 AGGTTGACTTTTCACTTTTTTGAAACTTTTATTTTGGATTCAGGTGCTGTGCCGTTCCTGGTCAGTGCCACCTC 1258
Query 735 TGGCACCACTGTGCTAGGGGCCTTTGACCCCCTGGAGGCAATTGCTGATGTGTGCCAGCGTCATGGGCTATGGC 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGGCACCACTGTGCTAGGGGCCTTTGACCCCCTGGAGGCAATTGCTGATGTGTGCCAGCGTCATGGGCTATGGC 1332
Query 809 TGCATGTGGATGCTGCCTGGGGTGGGAGCGTCCTGCTGTCACAGACACACAGGCATCTCCTGGATGGGATCCAG 882
|||||||||||
Sbjct 1333 TGCATGTGGAT--------------------------------------------------------------- 1343
Query 883 AGGGCTGACTCTGTGGCCTGGAATCCCCACAAGCTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCTTCTCCA 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1344 --GGCTGACTCTGTGGCCTGGAATCCCCACAAGCTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCTTCTCCA 1415
Query 957 GGATACCTCGAACCTGCTCAAGCGCTGCCATGGGTCCCAGGCCAGCTACCTTTTCCAGCAGGACAAGTTCTACG 1030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1416 GGATACCTCGAACCTGCTCAAGCGCTGCCATGGGTCCCAGGCCAGCTACCTTTTCCAGCAGGACAAGTTCTACG 1489
Query 1031 ATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGCCGCCGTGTGGACTGTCTGAAGCTGTGGCTCATG 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1490 ATGTGGCTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGCCGCCGTGTGGACTGTCTGAAGCTGTGGCTCATG 1563
Query 1105 TGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCCGGTACCTGGTGGA 1178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1564 TGGAAGGCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCCGGTACCTGGTGGA 1637
Query 1179 GGAAATGAAGAAGCGGGAAGGGTTTGAGCTAGTCATGGAGCCTGAGTTTGTCAATGTGTGTTTCTGGTTCGTAC 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1638 GGAAATGAAGAAGCGGGAAGGGTTTGAGCTAGTCATGGAGCCTGAGTTTGTCAATGTGTGTTTCTGGTTCGTAC 1711
Query 1253 CCCCCAGCCTGCGAGGGAAGCAGGAGAGTCCAGATTACCACGAAAGGCTGTCAAAGGTGGCCCCCGTGCTCAAG 1326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1712 CCCCCAGCCTGCGAGGGAAGCAGGAGAGTCCAGATTACCACGAAAGGCTGTCAAAGGTGGCCCCCGTGCTCAAG 1785
Query 1327 GAGCGCATGGTGAAGGAGGGCTCCATGATGATTGGCTACCAGCCCCACGGGACCCGGGGCAACTTCTTCCGTGT 1400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1786 GAGCGCATGGTGAAGGAGGGCTCCATGATGATTGGCTACCAGCCCCACGGGACCCGGGGCAACTTCTTCCGTGT 1859
Query 1401 GGTTGTGGCCAACTCTGCACTGACCTGTGCTGATATGGACTTCCTCCTCAACGAGCTGGAGCGGCTAGGCCAGG 1474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1860 GGTTGTGGCCAACTCTGCACTGACCTGTGCTGATATGGACTTCCTCCTCAACGAGCTGGAGCGGCTAGGCCAGG 1933
Query 1475 ACCTG--------------------------------------------------------------------- 1479
|||||
Sbjct 1934 ACCTGTGAGCCTTCTCTGTCTTGCTGCCGGCCTTGATACCACCCCTCACCCGCAGAGTCACTGCATTCCCTCCC 2007
Query 1480 -------------------------------------------------------------------------- 1479
Sbjct 2008 AGCCTTTGAGGCCGGGTGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACT 2081
Query 1480 -------------------------------------------------------------------------- 1479
Sbjct 2082 TGAGGTCAGGAGTTCGAGACCAGCCTGGCCAATAAGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCC 2155
Query 1480 -------------------------------------------------------------------------- 1479
Sbjct 2156 GAGCATGGTGGCCTGTGCCTGTAAACCCAGCTACTCAGGAGGTTGGGGCAGAATTGCTTGAACCCAGGGGGCAG 2229
Query 1480 -------------------------------------------------------------------------- 1479
Sbjct 2230 AGGTTGCAGTGAGCCGAGATTGCACCCCTGCACTCCAGGCTGGGCAACAGTACGAGACTCTGTTCCAAAAAAAA 2303
Query 1480 -------------------------------------------------------------------------- 1479
Sbjct 2304 TAAAAAAGAACAGCCTTTTTAGGCCACAGTGACCTGCGCAATGTTTATATGCTTTGACCTACTAACTTTCTCCT 2377
Query 1480 -------------------------------------------------------------------------- 1479
Sbjct 2378 AACTAAATATTTGATTTTAGGAGAGTGTTTAAATAAATTACAGTATGTCTATATGATGAAATGTTATTTTGCCA 2451
Query 1480 -------------------------------------------------------------------------- 1479
Sbjct 2452 TTAAAATTTTGTTTACAAAGATAATTTTTATTGACATAAAAATAACTTTAATGTAATTTATGTTGAAAAAGCTG 2525
Query 1480 -------------------------------------------------------------------------- 1479
Sbjct 2526 AATACAAGTCTTTATATAGAGTAATATTTGAGCTGTGTTCAAAAATACATAGGAAAAGACTGATAAAATGAAAT 2599
Query 1480 -------------------------------------------------------------------------- 1479
Sbjct 2600 ATGGCAAAATGTTAATAGTTTTCCCTGGAATAGGATAATAGGCAATTTTAAAACAGACTCCTTTAAAAAAACAA 2673
Query 1480 -------------------------------------------------------------------------- 1479
Sbjct 2674 ACAAACAAAAAAAACATAGACTTCTTTATATCTTTTGAGCTCCCTCCCTTTTATTATGTAATGAATATGTGTTG 2747
Query 1480 ------------------------------------------ 1479
Sbjct 2748 CTTTTGTAATAGGAAAATAATAAAGTTAAAATTTCAACTGCA 2789
