Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12027
- Subject:
- XM_017017929.1
- Aligned Length:
- 2513
- Identities:
- 1047
- Gaps:
- 1456
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCTTCCTCTTGGAAACTAATGCTGTTTCTGTCAGTCACCATGTGTCTTTCAGAAAGTGTGGACTATGGGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGTTTTTGTGCAAGAACCAGATGATATTATTTTTCCAACTGATTCTGATGAAAAGAAGGTAGCATTGAATTGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGTTCGTGGCAATCCAGTTCCCAGTTACAGATGGCTTCGAAATGGAACAGAAATAGATCTGGAAAGTGATTAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGCTACAGTTTGATAGATGGCACCTTCATTATAAGCAATCCAAGTGAAGCAAAGGATTCTGGTCATTATCAGTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTAGCAACCAACACTGTGGGGAGTATTCTTAGTAGAGAAGCTACACTGCAGTTTGCCTATCTGGGAAATTTTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGGCCGGACAAGAAGTGCAGTCTCTGTGAGGGAAGGCCAGGGTGTCGTTCTGATGTGCTCTCCTCCGCCACAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCACCAGAGATCATCTATAGCTGGGTATTTAATGAGTTCCCTTCCTTTGTGGCGGAAGACAGCCGGCGGTTCAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTCCCAGGAGACAGGCAACCTTTATATTTCTAAAGTCCAAACATCAGATGTTGGCAGCTATATTTGTCTGGTGA 592
Query 1 --------------------------------------------------------------------ATGGGA 6
||||||
Sbjct 593 AAAACACAGTGACGAATGCTAGAGTCCTTAGTCCTCCAACGCCACTCACTCTGCGTAATGATGGTGTGATGGGA 666
Query 7 GAATATGAGCCGAAAATTGAGGTCCATTTTCCTTTCACGGTTACAGCTGCTAAAGGAACAACTGTTAAGATGGA 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAATATGAGCCGAAAATTGAGGTCCATTTTCCTTTCACGGTTACAGCTGCTAAAGGAACAACTGTTAAGATGGA 740
Query 81 ATGCTTTGCACTTGGCAACCCCGTTCCAACAATCACATGGATGAAGGTTAATGGTTATATTCCTAGTAAGGCAC 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATGCTTTGCACTTGGCAACCCCGTTCCAACAATCACATGGATGAAGGTTAATGGTTATATTCCTAGTAAGGCAC 814
Query 155 GTCTGCGGAAATCTCAGGCGGTGCTGGAAATACCGAATGTACAGCTGGATGATGCAGGCATTTATGAGTGCAGA 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GTCTGCGGAAATCTCAGGCGGTGCTGGAAATACCGAATGTACAGCTGGATGATGCAGGCATTTATGAGTGCAGA 888
Query 229 GCTGAAAACTCACGTGGAAAAAATTCCTTTCGTGGACAATTACAAGTATACACCTACCCACACTGGGTAGAAAA 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GCTGAAAACTCACGTGGAAAAAATTCCTTTCGTGGACAATTACAAGTATACACCTACCCACACTGGGTAGAAAA 962
Query 303 ACTGAATGATACTCAGTTAGACAGTGGGAGCCCTCTCCGATGGGAATGTAAGGCTACTGGAAAACCCAGACCCA 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ACTGAATGATACTCAGTTAGACAGTGGGAGCCCTCTCCGATGGGAATGTAAGGCTACTGGAAAACCCAGACCCA 1036
Query 377 CGTATCGTTGGCTGAAGAATGGAGTACCCCTCTCACCTCAGAGTAGGGTTGAGATGGTTAATGGAGTATTGATG 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CGTATCGTTGGCTGAAGAATGGAGTACCCCTCTCACCTCAGAGTAGGGTTGAGATGGTTAATGGAGTATTGATG 1110
Query 451 ATCCACAATGTGAATCAATCAGATGCTGGAATGTATCAGTGTTTGGCTGAAAATAAGTATGGAGCCATTTACGC 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ATCCACAATGTGAATCAATCAGATGCTGGAATGTATCAGTGTTTGGCTGAAAATAAGTATGGAGCCATTTACGC 1184
Query 525 TAGTGCTGAGCTGAAGATTCTAGCTTCAGCTCCCACTTTTGCACTGAATCAACTGAAGAAAACAATAATTGTTA 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TAGTGCTGAGCTGAAGATTCTAGCTTCAGCTCCCACTTTTGCACTGAATCAACTGAAGAAAACAATAATTGTTA 1258
Query 599 CCAAAGACCAAGAAGTTGTCATAGAGTGCAAACCCCAAGGCTCTCCAAAACCAACCATCTCTTGGAAGAAAGGA 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CCAAAGACCAAGAAGTTGTCATAGAGTGCAAACCCCAAGGCTCTCCAAAACCAACCATCTCTTGGAAGAAAGGA 1332
Query 673 GACAGAGCAGTTAGAGAAAACAAAAGAATAGCTATTCTTCCAGACGGGAGTCTACGGATCCTAAATGCTTCCAA 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GACAGAGCAGTTAGAGAAAACAAAAGAATAGCTATTCTTCCAGACGGGAGTCTACGGATCCTAAATGCTTCCAA 1406
Query 747 ATCAGACGAGGGAAAGTACGTTTGCCGAGGGGAAAACGTCTTTGGTTCTGCTGAAATTATAGCTTCGCTATCTG 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 ATCAGACGAGGGAAAGTACGTTTGCCGAGGGGAAAACGTCTTTGGTTCTGCTGAAATTATAGCTTCGCTATCTG 1480
Query 821 TAAAAGAACCTACAAGGATAGAACTTACTCCTAAAAGAACAGAATTGACAGTGGGAGAAAGCATTGTCCTTAAT 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TAAAAGAACCTACAAGGATAGAACTTACTCCTAAAAGAACAGAATTGACAGTGGGAGAAAGCATTGTCCTTAAT 1554
Query 895 TGCAAAGCAATTCACGATGCTAGTTTGGATGTCACTTTCTACTGGACTCTGAAAGGACAGCCTATTGATTTCGA 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TGCAAAGCAATTCACGATGCTAGTTTGGATGTCACTTTCTACTGGACTCTGAAAGGACAGCCTATTGATTTCGA 1628
Query 969 GGAAGAGGGTGGACATTTTGAAAGCATCAGGGCCCAAGCATCCTCTGCAGATTTAAT--GATCAGGAACATCCT 1040
|||||||||||||||||||||||||||||||||| |.|| .||||.|| ||| ||||
Sbjct 1629 GGAAGAGGGTGGACATTTTGAAAGCATCAGGGCC---GTAT--------TATTTCATTGGAT--------TCCT 1683
Query 1041 TCTGATGCATGCTGGGAGATATGGCTGCAGGGTACAGACCACAGCAGACAGTGTGTCAGATGAGGCAGAACTTC 1114
||| ||.|| ||.||..|||||
Sbjct 1684 -------------------------------GTA---ACTAC-----ACTGTTAGTCAG--------------- 1703
Query 1115 TTGTTAGGGGACCCCCAGGCCCACCTGGGATAGTAATTGTTGAGGAAATAACCGAAAGTACGGCCACACTGTCC 1188
||| |||.|| |.||||.
Sbjct 1704 --------------CCA--------------AGTTAT--------ATATAAA---------------------- 1719
Query 1189 TGGAGCCCAGCAGCTGACAACCACAGCCCAATCTCCTCCTACAACCTTCAAGCTCGCAGCCCATTTTCCCTGGG 1262
Sbjct 1720 -------------------------------------------------------------------------- 1719
Query 1263 CTGGCAAACAGTAAAGACAGTCCCAGAAATCATAACAGGGGACATGGAGTCAGCCATGGCTGTGGACCTAAATC 1336
Sbjct 1720 -------------------------------------------------------------------------- 1719
Query 1337 CCTGGGTGGAATATGAATTTCGAGTGGTAGCCACCAACCCTATTGGGACAGGAGATCCAAGCACCCCATCTCGA 1410
Sbjct 1720 -------------------------------------------------------------------------- 1719
Query 1411 ATGATCCGCACAAATGAAGCAGTTCCGAAGACAGCACCCACCAATGTAAGCGGAAGAAGTGGAAGAAGGCATGA 1484
Sbjct 1720 -------------------------------------------------------------------------- 1719
Query 1485 GTTAGTCATTGCCTGGGAGCCAGTATCTGAAGAGTTTCAGAATGGGGAAGGCTTCGGCTATATTGTGGCTTTCA 1558
Sbjct 1720 -------------------------------------------------------------------------- 1719
Query 1559 GACCCAATGGAACACGTGGCTGGAAGGAAAAAATGGTGACATCCTCTGAAGCTTCCAAATTCATTTATCGAGAT 1632
Sbjct 1720 -------------------------------------------------------------------------- 1719
Query 1633 GAAAGTGTCCCTCCTCTTACTCCCTTTGAAGTGAAAGTTGGCGTTTATAACAATAAAGGAGATGGGCCTTTTAG 1706
Sbjct 1720 -------------------------------------------------------------------------- 1719
Query 1707 TCAAATTGTGGTCATCTGTTCAGCTGAAGGAGAACCCAGTGCTGCTCCCACAGATGTCAAGGCGACAAGTGTGT 1780
Sbjct 1720 -------------------------------------------------------------------------- 1719
Query 1781 CTGTGTCAGAGATTCTTGTTGCATGGAAACACATTAAAGAGAGTCTAGGAAGACCACAGGGATTTGAGGTA 1851
Sbjct 1720 ----------------------------------------------------------------------- 1719
