Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12028
- Subject:
- NR_145492.1
- Aligned Length:
- 2142
- Identities:
- 931
- Gaps:
- 1210
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CACATTGGAGATATATTTCCACAGCATCTGGCTTTTCTTGTTCCTGTTCTGAAGTAAATGTAACTGCTATCCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGAGGACTGTCTACAAGAGAGAAGCTCCCCACGTGGTTCCGTGTAAATACCTAGGAGTGGGCTTTTCTAGATC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACATGGTCGGTAGGCTCCACGACAAAAGTCAACCCTTCTGTAAATCACCTGCTGTGGTTATGATGCTCTGAGTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAATACGTCTGAACCTTTGCTGTCTATGGATCTGCTCTAAACCTTATAGCCTGCTTATGGGGGAAGGTGACGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTCTGGGCCCCATCTGTCCTTCCTCACAGCACCCTCAGCACCTTAAGCCACCACCCTCAGCCACAATTTGGCAG 370
Query 1 ----ATGGAGTCCAAGGTCTCAGAAGGTGGCCTGAATGTGACCCTCACCATCCGCCTGCTGATGCATGGAAAGG 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAGGATGGAGTCCAAGGTCTCAGAAGGTGGCCTGAATGTGACCCTCACCATCCGCCTGCTGATGCATGGAAAGG 444
Query 71 AAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACTGTGAAGAAGATGCGTGAGGAGAGTGGTGCAAGGATCAAC 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACTGTGAAGAAGATGCGTGAGGAGAGTGGTGCAAGGATCAAC 518
Query 145 ATCTCAGAGGGAAACTGCCCAGAGAGGATTGTGACCATCACAGGCCCCACAGACGCCATCTTCAAGGCCTTTGC 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ATCTCAGAGGGAAACTGCCCAGAGAGGATTGTGACCATCACAGGCCCCACAGACGCCATCTTCAAGGCCTTTGC 592
Query 219 CATGATCGCATACAAGTTTGAGGAGGATATCATCAACTCCATGAGCAACAGCCCTGCCACCAGCAAGCCCCCAG 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CATGATCGCATACAAGTTTGAGGAGGATATCATCAACTCCATGAGCAACAGCCCTGCCACCAGCAAGCCCCCAG 666
Query 293 TGACGCTGAGGCTGGTGGTGCCTGCCAGCCAGTGCGGGTCCCTGATCGGCAAAGGAGGCTCCAAGATCAAGGAG 366
||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGACGCTGAGGCTGGTGGTGCCTGCCAGCCAGTGTGGGTCCCTGATCGGCAAAGGAGGCTCCAAGATCAAGGAG 740
Query 367 ATCAGGGAGTCCACAGGTGCCCAGGTGCAGGTGGCTGGGGACATGCTGCCCAACTCCACGGAGCGAGCGGTGAC 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATCAGGGAGTCCACAGGTGCCCAGGTGCAGGTGGCTGGGGACATGCTGCCCAACTCCACGGAGCGAGCGGTGAC 814
Query 441 CATCTCGGGGACCCCAGATGCCATCATCCAGTGCGTCAAGCAGATCTGTGTGGTCATGCTGG------------ 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CATCTCGGGGACCCCAGATGCCATCATCCAGTGCGTCAAGCAGATCTGTGTGGTCATGCTGGAGTCCCCACCGA 888
Query 503 ---------------------------------------------------------------AGGCCTACACA 513
|||||||||||
Sbjct 889 AAGGTGCCACCATTCCCTACCGCCCAAAGCCCGCCTCCACCCCTGTCATTTTTGCAGGTGGTCAGGCCTACACA 962
Query 514 ATCCAGGGACAGTATGCCATCCCTCACCCGGAT---TTGACCAAGCTCCACCAGTTGGCCATGCAGCAAACCCC 584
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 963 ATCCAGGGACAGTATGCCATCCCTCACCCGGATCAGTTGACCAAGCTCCACCAGTTGGCCATGCAGCAAACCCC 1036
Query 585 CTTTCCTCCCCTCGGACAGACCAACCCCGCTTTCCCCGGAGAAAAGCTGCCTTTACACTCCTCCGAAGAAGCTC 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CTTTCCTCCCCTCGGACAGACCAACCCCGCTTTCCCCGGAGAAAAGCTGCCTTTACACTCCTCCGAAGAAGCTC 1110
Query 659 AAAATCTGATGGGCCAGTCATCAGGTCTGGACGCCAGCCCACCGGCCAGCACTCATGAGCTCACCATTCCCAAT 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AAAATCTGATGGGCCAGTCATCAGGTCTGGACGCCAGCCCACCGGCCAGCACTCATGAGCTCACCATTCCCAAT 1184
Query 733 GATCTAATAGGCTGCATAATTGGACGCCAAGGGACCAAAATCAATGAAATTCGACAGATGTCTGGAGCTCAGAT 806
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GAT-------GCTGCATAATTGGACGCCAAGGGACCAAAATCAATGAAATTCGACAGATGTCTGGAGCTCAGAT 1251
Query 807 CAAAATCGCCAACGCCACGGAAGGGTCCTCAGAGCGTCAGATCACCATCACGGGGACCCCGGCCAACATCAGCC 880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1252 CAAAATCGCCAACGCCACGGAAGGGTCCTCAGAGCGTCAGATCACCATCACGGGGACCCCGGCCAACATCAGCC 1325
Query 881 TTGCCCAGTATCTCATCAACGCCAGGCTGACGTCCGAGGTCACCGGGATGGGCACGCTG--------------- 939
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1326 TTGCCCAGTATCTCATCAACGCCAGGCTGACGTCCGAGGTCACCGGGATGGGCACGCTGTAATCCTACCCAGCA 1399
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1400 CCCTTCCCCCGCGTCACCCACCTGCCAGAGCCTAAGGCCCCCGGCTCTCGCACTCTGTACAGCCCACCTTCCCT 1473
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1474 GCCTCACAGATACCAATAGAGAGGTTTTCTTAATTAACAAAAGGACGTATGCCATGGAGAAACACACCCGCGCA 1547
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1548 CACAGCTGCTCTCTACAGAGGCTGCAGGCTCCGCCGAGTCCCCCCTCAGTGTTATTTTATTTATGACTTACGCT 1621
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1622 CCCGTCTGCCCATGCACCGGCATGCAGTGGTAATTATTTTAGAAATATTGTTCCTTGGTGTCAGCGTAGCTGTC 1695
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1696 TGTCTTAGGAGCTGGGTCGGCGTTCCGACAGCACTTCCTGTCCGCCCTTCTCCTCTGCCATCCAGAACCGTCCA 1769
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1770 GAACTGTTGCCTGAGACCCCTCCTCTCTCACACAGCCCTGCCATGCTGACTCGGTTTCCCCTCAGAGCCATTGT 1843
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1844 TGTCTGGGCTCGAGTTTCTGCCCCAGGTTGTGTGCTGGAATCGGGGGGTGGCTCTCCTGCCACCCATGGGGAGC 1917
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1918 GCCAGGAGAGGAGGGTCATGGAGGATGTTGGGGCTCTGACCCCAGGAGTGGGGTGGAGGGCGGAGCCTGCTGGG 1991
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1992 GGCCCTGCCTTCACAGAGATGCCGCGTGCTGGGAAGGCTCTTGGGGTCCCCTGAGCGTCTTCCAGGGTGGCTGG 2065
Query 940 ---------------------------------------------------------------------- 939
Sbjct 2066 AGAGCACAGACGCGCCAGGGAGCCCCCTCTGTGCTCCTCAGAGTTCAATAAATGTCGTGGCCCCTCCTCA 2135
