Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12028
- Subject:
- XR_002958615.1
- Aligned Length:
- 2318
- Identities:
- 938
- Gaps:
- 1379
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTATGATGCTCTGAGTTCAATACGTCTGAACCTTTGCTGTCTATGGATCTGCTCTAAACCTTATAGCCTGCTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATGGGGGAAGTTCCCAGGTCCCCCTTCAGTGAGGTCTTCCTGATGGATGCTGATATGGTCTGGCTGTGTCCCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCAAATCTCATCTTGAATTGTAGCTCCCACAATTCCTACAGGTCATGGGAGGGACTCAGTGGGAGCATCTCAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTTGTCTAAACGGGGAGAGTGGCCATCTGTCCGATACCCACATCAAACCTGATCGTTCCCAGCCTCACAGAGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTTTGTTCCAAGGTGACGCCTTCTGGGCCCCATCTGTCCTTCCTCACAGCACCCTCAGCACCTTAAGCCACCA 370
Query 1 -------------------------ATGGAGTCCAAGGTCTCAGAAGGTGGCCTGAATGTGACCCTCACCATCC 49
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCCTCAGCCACAATTTGGCAGAAGGATGGAGTCCAAGGTCTCAGAAGGTGGCCTGAATGTGACCCTCACCATCC 444
Query 50 GCCTGCTGATGCATGGAAAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACTGTGAAGAAGATGCGTGAG 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCCTGCTGATGCATGGAAAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACTGTGAAGAAGATGCGTGAG 518
Query 124 GAGAGTGGTGCAAGGATCAACATCTCAGAGGGAAACTGCCCAGAGAGGATTGTGACCATCACAGGCCCCACAGA 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAGAGTGGTGCAAGGATCAACATCTCAGAGGGAAACTGCCCAGAGAGGATTGTGACCATCACAGGCCCCACAGA 592
Query 198 CGCCATCTTCAAGGCCTTTGCCATGATCGCATACAAGTTTGAGGAGGATATCATCAACTCCATGAGCAACAGCC 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CGCCATCTTCAAGGCCTTTGCCATGATCGCATACAAGTTTGAGGAGGATATCATCAACTCCATGAGCAACAGCC 666
Query 272 CTGCCACCAGCAAGCCCCCAGTGACGCTGAGGCTGGTGGTGCCTGCCAGCCAGTGCGGGTCCCTGATCGGCAAA 345
|||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 667 CTGCCACCAGCAAGCCCCCAGTGACGCTGAGGCTGGTGGTGCCTGCCAGCCAGTGTGGGTCCCTGATCGGCAAA 740
Query 346 GGAGGCTCCAAGATCAAGGAGATCAGGGAGTCCACAGGTGCCCAGGTGCAGGTGGCTGGGGACATGCTGCCCAA 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGAGGCTCCAAGATCAAGGAGATCAGGGAGTCCACAGGTGCCCAGGTGCAGGTGGCTGGGGACATGCTGCCCAA 814
Query 420 CTCCACGGAGCGAGCGGTGACCATCTCGGGGACCCCAGATGCCATCATCCAGTGCGTCAAGCAGATCTGTGTGG 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTCCACGGAGCGAGCGGTGACCATCTCGGGGACCCCAGATGCCATCATCCAGTGCGTCAAGCAGATCTGTGTGG 888
Query 494 TCATGCTGGA---------------------------------------------------------------- 503
||||||||||
Sbjct 889 TCATGCTGGAGTCCCCACCGAAAGGTGCCACCATTCCCTACCGCCCAAAGCCCGCCTCCACCCCTGTCATTTTT 962
Query 504 -------------------------------------------------------------------------- 503
Sbjct 963 GCAGGTGGTCAGGTAAGAGCCGATCCGCTCGCGGCCTCCACTGCCAACCTCAGCCTTTTACTGCAGCACCCGCC 1036
Query 504 -------------------------------------------------------------------------- 503
Sbjct 1037 GCTGCCCAAACTTGGAGTCGGAAGCATCAAGGCTGAACTGTTTCCCTCCCACCCGCTGAACTGGCCAGCTCAGC 1110
Query 504 ---------------------GGCCTACACAATCCAGGGACAGTATGCCATCCCTCACCCGGATTTGACCAAGC 556
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TCTGCCCGCCCAGAGGAAGTGGGCCTACACAATCCAGGGACAGTATGCCATCCCTCACCCGGATTTGACCAAGC 1184
Query 557 TCCACCAGTTGGCCATGCAGCAAACCCCCTTTCCTCCCCTCGGACAGACCAACCCCGCTTTCCCCGGAGAAAAG 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TCCACCAGTTGGCCATGCAGCAAACCCCCTTTCCTCCCCTCGGACAGACCAACCCCGCTTTCCCCGGAGAAAAG 1258
Query 631 CTGCCTTTACACTCCTCCGAAGAAGCTCAAAATCTGATGGGCCAGTCATCAGGTCTGGACGCCAGCCCACCGGC 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CTGCCTTTACACTCCTCCGAAGAAGCTCAAAATCTGATGGGCCAGTCATCAGGTCTGGACGCCAGCCCACCGGC 1332
Query 705 CAGCACTCATGAGCTCACCATTCCCAATGATCTAATAGGCTGCATAATTGGACGCCAAGGGACCAAAATCAATG 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CAGCACTCATGAGCTCACCATTCCCAATGATCTAATAGGCTGCATAATTGGACGCCAAGGGACCAAAATCAATG 1406
Query 779 AAATTCGACAGATGTCTGGAGCTCAGATCAAAATCGCCAACGCCACGGAAGGGTCCTCAGAGCGTCAGATCACC 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AAATTCGACAGATGTCTGGAGCTCAGATCAAAATCGCCAACGCCACGGAAGGGTCCTCAGAGCGTCAGATCACC 1480
Query 853 ATCACGGGGACCCCGGCCAACATCAGCCTTGCCCAGTATCTCATCAACGCCAGGCTGACGTCCGAGGTCACCGG 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 ATCACGGGGACCCCGGCCAACATCAGCCTTGCCCAGTATCTCATCAACGCCAGGCTGACGTCCGAGGTCACCGG 1554
Query 927 GATGGGCACGCTG------------------------------------------------------------- 939
|||||||||||||
Sbjct 1555 GATGGGCACGCTGTAATCCTACCCAGCACCCTTCCCCCGCGTCACCCACCTGCCAGAGCCTAAGGCCCCCGGCT 1628
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1629 CTCGCACTCTGTACAGCCCACCTTCCCTGCCTCACAGATACCAATAGAGAGGTTTTCTTAATTAACAAAAGGAC 1702
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1703 GTATGCCATGGAGAAACACACCCGCGCACACAGCTGCTCTCTACAGAGGCTGCAGGCTCCGCCGAGTCCCCCCT 1776
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1777 CAGTGTTATTTTATTTATGACTTACGCTCCCGTCTGCCCATGCACCGGCATGCAGTGGTAATTATTTTAGAAAT 1850
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1851 ATTGTTCCTTGGTGTCAGCGTAGCTGTCTGTCTTAGGAGCTGGGTCGGCGTTCCGACAGCACTTCCTGTCCGCC 1924
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1925 CTTCTCCTCTGCCATCCAGAACCGTCCAGAACTGTTGCCTGAGACCCCTCCTCTCTCACACAGCCCTGCCATGC 1998
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1999 TGACTCGGTTTCCCCTCAGAGCCATTGTTGTCTGGGCTCGAGTTTCTGCCCCAGGTTGTGTGCTGGAATCGGGG 2072
Query 940 -------------------------------------------------------------------------- 939
Sbjct 2073 GGTGGCTCTCCTGCCACCCATGGGGAGCGCCAGGAGAGGAGGGTCATGGAGGATGTTGGGGCTCTGACCCCAGG 2146
Query 940 -------------------------------------------------------------------------- 939
Sbjct 2147 AGTGGGGTGGAGGGCGGAGCCTGCTGGGGGCCCTGCCTTCACAGAGATGCCGCGTGCTGGGAAGGCTCTTGGGG 2220
Query 940 -------------------------------------------------------------------------- 939
Sbjct 2221 TCCCCTGAGCGTCTTCCAGGGTGGCTGGAGAGCACAGACGCGCCAGGGAGCCCCCTCTGTGCTCCTCAGAGTTC 2294
Query 940 ------------------------ 939
Sbjct 2295 AATAAATGTCGTGGCCCCTCCTCA 2318
