Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12044
- Subject:
- XM_006506865.2
- Aligned Length:
- 3796
- Identities:
- 2154
- Gaps:
- 1241
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGCCGACCTGAACCTGGAGTGGATCTGCTCGCTGCCGCGCTCCTGGACGTACGGGATCACTAGGGGCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGCGTCTTCTTCATCAACGAGGAGGCCAAGAGCACCACCTGGCTACACCCGGTCACCGGCGAGGCCGTGGTCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGGGCACCGGCGGCAGAGCACAGATTTGCCCACTGGCTGGGAAGAAGCATATACGTTCGAAGGTGCAAGATAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TATATAAACCACAATGAAAGGAAAGTGACCTGCAAGCATCCGGTTACAGGACAGCCATCCCAAGACAACTGTAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTTGTTGTGAATGATCAGACTGTTGCAACCATGACGTCCGAAGACAAGAAGGAACGACCCATAAGTATGATAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGAAGCTTCCAATTACAACATGGCTTCAGATTATGCAGTGCATCCCATGAGCCCTGTGGGCAGGACCTCGCGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCTCCAAAAAGGTTCATAATTTTGGGAAAAGGTCCAATTCAATTAAAAGGAACCCTAATGCACCTGTGGTCCG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCGTGGCTGGCTGTATAAGCAGGACAGCACCGGCATGAAGCTGTGGAAGAAGCGCTGGTTTGTGCTCTCTGACC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTTGCCTTTTCTATTACCGAGATGAGAAGGAGGAGGGTATTTTGGGAAGTATCCTGTTGCCTAGTTTTCAGATA 666
Query 1 ---------------------------------------------------------------ATGCGGACCTA 11
|||||||||||
Sbjct 667 GCCATGCTCACTGCTGAGGACCACATCAATCGCAAATATGCTTTTAAGGCAGCCCACCCAAACATGCGGACCTA 740
Query 12 TTATTTCTGCACTGATACAGGAAAGGAAATGGAGTTGTGGATGAAAGCCATGTTAGATGCTGCCCTAGTACAGA 85
||||||||||||.||||||||||||||.||||||.||||||||||.|||||||||||||||||.||.||.||||
Sbjct 741 TTATTTCTGCACCGATACAGGAAAGGAGATGGAGCTGTGGATGAAGGCCATGTTAGATGCTGCTCTGGTGCAGA 814
Query 86 CAGAACCTGTGAAAA------------------GAGTGGACAAGATTACATCTGAAAATGCACCAACTAAAGAA 141
||||||||||||||| |||||||||||||||||.||||.|.||||.||||.||||||
Sbjct 815 CAGAACCTGTGAAAAGAATTACCTTTAATTTCCGAGTGGACAAGATTACAACTGACAGTGCATCAACCAAAGAA 888
Query 142 ACCAATAACATTCCCAACCATAGAGTGCTAATTAAACCAGAGATCCAAAACAATCAAAAAAACAAGGAAATGAG 215
||||||||||||||||||||.|||||.||.||||.|||.|||.||||||||.||||.||.||.||||||||.||
Sbjct 889 ACCAATAACATTCCCAACCACAGAGTTCTCATTAGACCCGAGGTCCAAAACCATCAGAAGAATAAGGAAATCAG 962
Query 216 CAAAATTGAAGAAAAAAAGGCATTAGAAGCTGAAAAATATGGATTTCAGAAGGATGGTCAAGATAGACCCTTAA 289
|||||||||||||||||.|||.|||||||||||||.|||.||||||||||||||.||.|||||||||||.||||
Sbjct 963 CAAAATTGAAGAAAAAAGGGCCTTAGAAGCTGAAAGATACGGATTTCAGAAGGACGGGCAAGATAGACCATTAA 1036
Query 290 CAAAAATTAATAGTGTAAAGCTGAATTCTCTGCCATCTGAATATGAGAGTGGGTCAGCATGCCCTGCTCAGACT 363
||||||||||.|||||.|||.||||.||.||||.|||.||||||||.||.|||.|||..|||||..||||||.|
Sbjct 1037 CAAAAATTAACAGTGTGAAGTTGAACTCCCTGCTATCAGAATATGAAAGCGGGCCAGACTGCCCACCTCAGAAT 1110
Query 364 GTGCACTACAGACCAATCAACTTGAGCAGTTCAGAGAACAAAATAGTCAATGTTAGCCTGGCAGATCTTAGAGG 437
||.|||||||||||.|||||..|||..|||||.||...||||...||.|||||.|||.||||||||.|..|.||
Sbjct 1111 GTACACTACAGACCCATCAATGTGAATAGTTCTGACGGCAAAGCGGTGAATGTCAGCTTGGCAGATGTCCGGGG 1184
Query 438 TGGAAATCGCCCCAATACAGGGCCCTTATACACAGAGGCCGATCGAGTCATACAGAGAACAAATTCAATGCAGC 511
|||.|.||.|||.|||.||||||||.||..||||||||||||.||||||||.||||||||.|||||||||||.|
Sbjct 1185 TGGGAGTCACCCAAATGCAGGGCCCCTAGCCACAGAGGCCGACCGAGTCATTCAGAGAACGAATTCAATGCAAC 1258
Query 512 AGTTGGAACAGTGGATTAAAATCCAGAAGGGGAGGGGTCATGAAGAAGAAACCAGGGGAGTAATTTCTTACCAA 585
||.|.||.||||||||||||.|||||||.||..||||||.|||||||||..||||.||||||||||||||.|||
Sbjct 1259 AGCTAGAGCAGTGGATTAAAGTCCAGAAAGGACGGGGTCTTGAAGAAGAGCCCAGAGGAGTAATTTCTTATCAA 1332
Query 586 ACATTACCAAGAAATATGCCAAGTCACAGAGCCCAGATTATGGCCCGCTACCCTGAAGGTTATAGAACACTCCC 659
|||||.|||||||||||||||||.||||||||||||||..|||||||||.||||||||||||..|.||||||||
Sbjct 1333 ACATTGCCAAGAAATATGCCAAGCCACAGAGCCCAGATCCTGGCCCGCTGCCCTGAAGGTTACCGGACACTCCC 1406
Query 660 AAGAAACAGCAAGACAAGGCCTGAAAGTATCTGCAGTGTAACCCCTTCCACTCATGACAAGACATTAGGACCCG 733
.||||||||||||||.||.|||||.|||||||||||.||||||.||||...||||||.||||| |||.||.|
Sbjct 1407 GAGAAACAGCAAGACCAGACCTGAGAGTATCTGCAGCGTAACCTCTTCTGGTCATGAGAAGAC---AGGGCCGG 1477
Query 734 GAGCGGAGGAGAAACGGAGGTCCATGAGAGATGACACAATGTGGCAGCTCTACGAATGGCAGCAGCGTCAGTTT 807
||||.||.|||||.|||.|.|||||||||||||||||.|||||||||||.|||||.|||||||||||.||||||
Sbjct 1478 GAGCAGAAGAGAAGCGGCGATCCATGAGAGATGACACCATGTGGCAGCTGTACGAGTGGCAGCAGCGCCAGTTT 1551
Query 808 TATAACAAACAGAGCACCCTCCCTCGACACAGTACT--TTGAGTAGTCCCAAAACCATGGTAAATATTTCTGAC 879
||..||||.|||||||||||||||||.|||.| || .||||.|||||||||.|||||||..|..|.||||||
Sbjct 1552 TACCACAAGCAGAGCACCCTCCCTCGGCACGG--CTGCCTGAGCAGTCCCAAAGCCATGGTGCAGGTGTCTGAC 1623
Query 880 CAGACAATGCACTCTATTCCCACATCACCTTCCCACGGGTCAATAGCTGCTTATCAGGGATACTCCCCTCAACG 953
|||||.||||||||.||.|||||.|||||||||||.||||||..|||||||||.|||||.|.|||||||||.||
Sbjct 1624 CAGACGATGCACTCCATCCCCACGTCACCTTCCCATGGGTCAGCAGCTGCTTACCAGGGCTTCTCCCCTCAGCG 1697
Query 954 AACTTACAGATCGGAAGTGTCTTCACCAATTCAGAGAGGAGATGTGACAATAGACCGCAGACACAGGGCCCATC 1027
.||.|||||.||.||||||.|.||.||.||.|||||||||||||||||.|||||||||||.||||||.|.||||
Sbjct 1698 GACGTACAGGTCAGAAGTGACCTCGCCCATCCAGAGAGGAGATGTGACGATAGACCGCAGGCACAGGCCTCATC 1771
Query 1028 ACCCTAAGCATGTCTATGTGCCTGACAGAAGGTCAGTGCCAGCTGGCCTGACTTTACAGTCTGTTAGTCCCCAG 1101
|||||||||||||||||||..||||||||||||||.|||||||||||.|.|||||||||.||||||||||||||
Sbjct 1772 ACCCTAAGCATGTCTATGTAGCTGACAGAAGGTCAATGCCAGCTGGCTTAACTTTACAGGCTGTTAGTCCCCAG 1845
Query 1102 AGCCTCCAAGGGAAAACG-------------------------------------------------------- 1119
|||||||||||.|.||||
Sbjct 1846 AGCCTCCAAGGCAGAACGCCAGAGGAGCTCACACTGCTGCTAATAAAGCTGAGACGGCAGCAGGCAGAGCTGAG 1919
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 1920 TAGTGTCCGGGAGCACACCTTAGCACAGCTCATGCAGCTGAAACTTGAGGCCCACAGCCCAAAGAATGAGATTC 1993
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 1994 TTTCACATCATCTCCAAAGGAACACCATATATTTGGATCATCAGTTCTTAAGACAGAAGAACAAGATAAGTCTC 2067
Query 1120 ------CTGTCACAAGATGAAGGTAGAGGCACATTATACAAATACAGACCTGAAGAAGTAGATATTGATGCCAA 1187
|||||||||||||||.||||||||||||||||||||||||||||||||||||.||.||||||||||||
Sbjct 2068 TATTGTCTGTCACAAGATGAATGTAGAGGCACATTATACAAATACAGACCTGAAGAAGCAGGTATTGATGCCAA 2141
Query 1188 GTTAAGCCGATTATGTGAACAAGATAAAGTGGTGCATGCTCTGGAAGAGAAACTTCAGCAACTCCACAAGGAGA 1261
.||||||.||||.||||||||.|||||||||||.|..||.|||||.|||||.||.|||||.||.||||||||||
Sbjct 2142 ATTAAGCAGATTGTGTGAACAGGATAAAGTGGTCCGAGCGCTGGAGGAGAAGCTGCAGCAGCTGCACAAGGAGA 2215
Query 1262 AATACACGCTTGAGCAAGCTTTGCTATCAGCCAGCCAAGAGATAGAAATGCATGCAGATAACCCAGCAGCCATT 1335
|||||||||||||||||||.|||||.||||||||||||||||||||.|||.||||.|||||||||||.||||||
Sbjct 2216 AATACACGCTTGAGCAAGCCTTGCTGTCAGCCAGCCAAGAGATAGAGATGAATGCTGATAACCCAGCTGCCATT 2289
Query 1336 CAGACAGTGGTGTTACAAAGGGATGATTTACAAAATGGACTGCTTAGTACGTGTCGAGAACTTTCTCGAGCCAC 1409
||.||.||||||||.||.||||||||..|.|||||.||||||||.||.||||||||.|||||.||.||||||||
Sbjct 2290 CAAACTGTGGTGTTGCAGAGGGATGACCTGCAAAACGGACTGCTGAGCACGTGTCGGGAACTCTCCCGAGCCAC 2363
Query 1410 TGCCGAATTGGAACGAGCATGGAGAGAATATGATAAGTTAGAATACGATGTAACTGTTACCAGGAACCAGATGC 1483
|||.||..||||||||||.||||||||||||||.|||||.|||||.|||||.||||||||||||.|||||||||
Sbjct 2364 TGCTGAGCTGGAACGAGCCTGGAGAGAATATGACAAGTTGGAATATGATGTGACTGTTACCAGGGACCAGATGC 2437
Query 1484 AAGAGCAGCTGGATCACCTTGGTGAAGTTCAGACGGAATCAGCAGGAATTCAGCGTGCACAGATTCAGAAAGAA 1557
|.|..|||||.||.|.||||||.|||||.||||..||.||.|||||||||||.||.|||||||||||.||.||.
Sbjct 2438 AGGGTCAGCTCGACCGCCTTGGAGAAGTGCAGAGTGAGTCGGCAGGAATTCAACGGGCACAGATTCAAAAGGAG 2511
Query 1558 CTTTGGCGAATTCAGGATGTCATGGAAGGGCTGAGTAAACATAAGCAGCAAAGAGGTACTACAGAAA---TAGG 1628
||.|||.|||||||.|||||||||||.|||.||||.|||||.||.|||||||||||..||.|||||| ||||
Sbjct 2512 CTCTGGAGAATTCAAGATGTCATGGAGGGGTTGAGCAAACACAAACAGCAAAGAGGCTCTTCAGAAACAGTAGG 2585
Query 1629 TATGATAGGATCAAAGCCTTTCTCAACAGTTAAGTACAA----------------------------------- 1667
|.||..|||||||||||||||||||.|||||||||||||
Sbjct 2586 TCTGGCAGGATCAAAGCCTTTCTCATCAGTTAAGTACAAGAGCGAGGAAGAGGAAGTAGTCCCACCTCGGCCTC 2659
Query 1668 -------------------------------------------------------------------------- 1667
Sbjct 2660 CACTTCCTCGGTCTTATGACTTTACAGAGCAGCCTCCCATAATCCCCCCTCTGCCCAGTGATAGCAGCTCCTTG 2733
Query 1668 -----------------------------------------------------------------------AAA 1670
|||
Sbjct 2734 CTCTGTTATAGCAGGGGCCCCGTGCATCTGCCTGAAGACAAGAAGATTCATCAAGTTCAAGGATATCCAAGAAA 2807
Query 1671 TGAG----------GGTCCAGATTATAGACTCTACAAGAGTGAACCAGAGTTAACAACAGTGGCAGAAGTTGAT 1734
|| | |||||||||||||||||||||||||||||.|||||||||||.||||||||||||||.|||
Sbjct 2808 TG-GATCTCACTGTGGTCCAGATTATAGACTCTACAAGAGTGAGCCAGAGTTAACCACAGTGGCAGAAGTCGAT 2880
Query 1735 GAATCTAATGGAGAAGAAAAATCAGAACCTGTTTCAGAGATAGAAACTTCAGTTGTTAAAGGTTCCCACTTTCC 1808
||||||||.|||||||||||.|||||.||.|||||.||||.||||.||.||||.||||||||||||||.|||||
Sbjct 2881 GAATCTAACGGAGAAGAAAAGTCAGAGCCAGTTTCTGAGACAGAAGCTCCAGTCGTTAAAGGTTCCCATTTTCC 2954
Query 1809 TGTTGGAGTAGTCCCTCCAAGAGCAAAATCACCAACACCCGAATCTTCGACAATAGCTTCCTATGTAACCTTGA 1882
.||.|| |||.||||..|||.||||.|||||.||||||||.||.||.||.||||||||||||||.|||||||
Sbjct 2955 AGTCGG---AGTTCCTCTGAGAACAAAGTCACCCACACCCGAGTCCTCCACGATAGCTTCCTATGTGACCTTGA 3025
Query 1883 GGAAAACTAAGAAGATGATGGATCTAAGAACGGAAAGACCAAGAAGTGCAGTGGAACAGCTCTGTTTGGCTGAA 1956
||||.||||||||||||.||||.||||||||||||||||||||||||||.|||||.|||||.|||.|||||||.
Sbjct 3026 GGAAGACTAAGAAGATGGTGGAGCTAAGAACGGAAAGACCAAGAAGTGCCGTGGAGCAGCTGTGTCTGGCTGAG 3099
Query 1957 AGTACTCGACCAAGGATGACTGTGGAAGAGCAAATGGAAAGAATAAGAAGACATCAACAAGCGTGCCTGAGGGA 2030
|||.|||||||.||.|||||||||||||||||..|.||.||.||.||.|||||.||.||.||.|||||||||||
Sbjct 3100 AGTGCTCGACCTAGAATGACTGTGGAAGAGCAGCTAGAGAGGATCAGGAGACACCAGCAGGCCTGCCTGAGGGA 3173
Query 2031 GAAGAAAAAAGGGTTAAATGTTATCGGTGCTTCAGACCAGTCACCCTTACAAAGCCCTTCAAATTTAAGGGATA 2104
||||||.||.|||.|.|.|||..||||||||||.|| |||.|||.|..|.|||||.|
Sbjct 3174 GAAGAAGAAGGGGCTGAGTGTCCTCGGTGCTTCCGA------------------CCCGTCAGACGTGAGGGACA 3229
Query 2105 ATCCATTTAGGACTACTCAGACTCGAAGGAGGGATGA------TAAGGAACTGGACACTG-CCATTAGAGAAAA 2171
.||||.|.|||..|||||||||||.|||||||||||| ||||||.||.|||||.| ||| .||||||||
Sbjct 3230 GTCCACTCAGGCTTACTCAGACTCTAAGGAGGGATGATAACGTTAAGGAGCTAGACACCGTCCA-CAGAGAAAA 3302
Query 2172 TGATGTAAAGCCAGACCATGAAACTCCTGCA--ACAGAAATTGT--TCAACTAAAAGAAACCGAACCCCAAAAT 2241
||||||||||||||||.|.||.|||||.||| |||| ||| |||.|||.||||..|.||||||||.|||
Sbjct 3303 TGATGTAAAGCCAGACTACGAGACTCCAGCAGCACAG----TGTGCTCACCTAGAAGACGCTGAACCCCAGAAT 3372
Query 2242 GTGGACTTCAGCAAAGAGTTAAAAAAAACTGAAAACATTTCATATGAAATGCTTTTTGAACCTGAGCCAAATGG 2315
|..|||.||.|||.|.||.|||||| .||.|||||||||||....||||||.||||||||
Sbjct 3373 GCAGACATCGGCAGAAAGCTAAAAA---------------GATCTGAAATGCTTTACACACCTGAACCAAATGG 3431
Query 2316 AGTAAATTCTGTGGAAATGATGGATAAAGAAAGAAACAAAGACAAAATGCCTGAGGATGTTACATTCAGCCCTC 2389
|.|...|||||.||||.|||.|||.||.||||||.|.|||||..|..|||.||..||||...|||.||||||||
Sbjct 3432 AATGGCTTCTGAGGAAGTGACGGAGAAGGAAAGACAGAAAGAGCAGGTGCATGCCGATGGGTCATGCAGCCCTC 3505
Query 2390 AAGATGAAAC-------ACAGACCGCAAATCATAAACCAGAAGAGCATCCTGAAGAAAATACAAAGAACAGTGT 2456
|.||.||.|| |||||.| ||||.| ..||||..|..|||||.||| .||.|| |||.|
Sbjct 3506 AGGAAGAGACGGCCATGACAGAGC----ATCAGA---TGGAAGGCCCCCCTGAGGAA---GCAGAG---AGTCT 3566
Query 2457 TGACGAACAGGAAGAAACTGTTATTTCTTACGAATCAACTCCTGAGGTTTCTAGAGGA-AATCAAACAATGGCA 2529
|.|.||..|||||||||||.||..|||.|..||..||.||||||||.||.|||| ||| ||||||||.| ||
Sbjct 3567 TCATGAGGAGGAAGAAACTCTTGCTTCCTGTGAGCCAGCTCCTGAGATTCCTAG-GGAGAATCAAACCA---CA 3636
Query 2530 GTGAAAAGTCTGTCCCCATCTCCTGAGTCCT---CGGCATCGCCAGTTCCATCCACTCAGCCGCAGCTCACAGA 2600
||||.||||||||||||.||||||||.|||| ||||| .|||.|||..||||||..||.|||||||..||
Sbjct 3637 GTGAGAAGTCTGTCCCCGTCTCCTGACTCCTCCACGGCA---GCAGATCCGCCCACTCCTCCACAGCTCAGGGA 3707
Query 2601 AGGATCACATTTCATGTGTGTG 2622
||||||.|||||||||||||||
Sbjct 3708 AGGATCGCATTTCATGTGTGTG 3729
