Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12044
- Subject:
- XM_006506866.2
- Aligned Length:
- 3877
- Identities:
- 2070
- Gaps:
- 1424
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGCCGACCTGAACCTGGAGTGGATCTGCTCGCTGCCGCGCTCCTGGACGTACGGGATCACTAGGGGCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGCGTCTTCTTCATCAACGAGGAGGCCAAGAGCACCACCTGGCTACACCCGGTCACCGGCGAGGCCGTGGTCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGGGCACCGGCGGCAGAGCACAGATTTGCCCACTGGCTGGGAAGAAGCATATACGTTCGAAGGTGCAAGATAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TATATAAACCACAATGAAAGGAAAGTGACCTGCAAGCATCCGGTTACAGGACAGCCATCCCAAGACAACTGTAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTTGTTGTGAATGATCAGACTGTTGCAACCATGACGTCCGAAGACAAGAAGGAACGACCCATAAGTATGATAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGAAGCTTCCAATTACAACATGGCTTCAGATTATGCAGTGCATCCCATGAGCCCTGTGGGCAGGACCTCGCGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCTCCAAAAAGGTTCATAATTTTGGGAAAAGGTCCAATTCAATTAAAAGGAACCCTAATGCACCTGTGGTCCG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCGTGGCTGGCTGTATAAGCAGGACAGCACCGGCATGAAGCTGTGGAAGAAGCGCTGGTTTGTGCTCTCTGACC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTTGCCTTTTCTATTACCGAGATGAGAAGGAGGAGGGTATTTTGGGAAGTATCCTGTTGCCTAGTTTTCAGATA 666
Query 1 ---------------------------------------------------------------ATGCGGACCTA 11
|||||||||||
Sbjct 667 GCCATGCTCACTGCTGAGGACCACATCAATCGCAAATATGCTTTTAAGGCAGCCCACCCAAACATGCGGACCTA 740
Query 12 TTATTTCTGCACTGATACAGGAAAGGAAATGGAGTTGTGGATGAAAGCCATGTTAGATGCTGCCCTAGTACAGA 85
||||||||||||.||||||||||||||.||||||.||||||||||.|||||||||||||||||.||.||.||||
Sbjct 741 TTATTTCTGCACCGATACAGGAAAGGAGATGGAGCTGTGGATGAAGGCCATGTTAGATGCTGCTCTGGTGCAGA 814
Query 86 CAGAACCTGTGAAAA------------------GAGTGGACAAGATTACATCTGAAAATGCACCAACTAAAGAA 141
||||||||||||||| |||||||||||||||||.||||.|.||||.||||.||||||
Sbjct 815 CAGAACCTGTGAAAAGAATTACCTTTAATTTCCGAGTGGACAAGATTACAACTGACAGTGCATCAACCAAAGAA 888
Query 142 ACCAATAACATTCCCAACCATAGAGTGCTAATTAAACCAGAGATCCAAAACAATCAAAAAAACAAGGAAATGAG 215
||||||||||||||||||||.|||||.||.||||.|||.|||.||||||||.||||.||.||.||||||||.||
Sbjct 889 ACCAATAACATTCCCAACCACAGAGTTCTCATTAGACCCGAGGTCCAAAACCATCAGAAGAATAAGGAAATCAG 962
Query 216 CAAAATTGAAGAAAAAAAGGCATTAGAAGCTGAAAAATATGGATTTCAGAAGGATGGTCAAGATAGACCCTTAA 289
|||||||||||||||||.|||.|||||||||||||.|||.||||||||||||||.||.|||||||||||.||||
Sbjct 963 CAAAATTGAAGAAAAAAGGGCCTTAGAAGCTGAAAGATACGGATTTCAGAAGGACGGGCAAGATAGACCATTAA 1036
Query 290 CAAAAATTAATAGTGTAAAGCTGAATTCTCTGCCATCTGAATATGAGAGTGGGTCAGCATGCCCTGCTCAGACT 363
||||||||||.|||||.|||.||||.||.||||.|||.||||||||.||.|||.|||..|||||..||||||.|
Sbjct 1037 CAAAAATTAACAGTGTGAAGTTGAACTCCCTGCTATCAGAATATGAAAGCGGGCCAGACTGCCCACCTCAGAAT 1110
Query 364 GTGCACTACAGACCAATCAACTTGAGCAGTTCAGAGAACAAAATAGTCAATGTTAGCCTGGCAGATCTTAGAGG 437
||.|||||||||||.|||||..|||..|||||.||...||||...||.|||||.|||.||||||||.|..|.||
Sbjct 1111 GTACACTACAGACCCATCAATGTGAATAGTTCTGACGGCAAAGCGGTGAATGTCAGCTTGGCAGATGTCCGGGG 1184
Query 438 TGGAAATCGCCCCAATACAGGGCCCTTATACACAGAGGCCGATCGAGTCATACAGAGAACAAATTCAATGCAGC 511
|||.|.||.|||.|||.||||||||.||..||||||||||||.||||||||.||||||||.|||||||||||.|
Sbjct 1185 TGGGAGTCACCCAAATGCAGGGCCCCTAGCCACAGAGGCCGACCGAGTCATTCAGAGAACGAATTCAATGCAAC 1258
Query 512 AGTTGGAACAGTGGATTAAAATCCAGAAGGGGAGGGGTCATGAAGAAGAAACCAGGGGAGTAATTTCTTACCAA 585
||.|.||.||||||||||||.|||||||.||..||||||.|||||||||..||||.||||||||||||||.|||
Sbjct 1259 AGCTAGAGCAGTGGATTAAAGTCCAGAAAGGACGGGGTCTTGAAGAAGAGCCCAGAGGAGTAATTTCTTATCAA 1332
Query 586 ACATTACCAAGAAATATGCCAAGTCACAGAGCCCAGATTATGGCCCGCTACCCTGAAGGTTATAGAACACTCCC 659
|||||.|||||||||||||||||.||||||||||||||..|||||||||.||||||||||||..|.||||||||
Sbjct 1333 ACATTGCCAAGAAATATGCCAAGCCACAGAGCCCAGATCCTGGCCCGCTGCCCTGAAGGTTACCGGACACTCCC 1406
Query 660 AAGAAACAGCAAGACAAGGCCTGAAAGTATCTGCAGTGTAACCCCTTCCACTCATGACAAGACATTAGGACCCG 733
.||||||||||||||.||.|||||.|||||||||||.||||||.||||...||||||.||||| |||.||.|
Sbjct 1407 GAGAAACAGCAAGACCAGACCTGAGAGTATCTGCAGCGTAACCTCTTCTGGTCATGAGAAGAC---AGGGCCGG 1477
Query 734 GAGCGGAGGAGAAACGGAGGTCCATGAGAGATGACACAATGTGGCAGCTCTACGAATGGCAGCAGCGTCAGTTT 807
||||.||.|||||.|||.|.|||||||||||||||||.|||||||||||.|||||.|||||||||||.||||||
Sbjct 1478 GAGCAGAAGAGAAGCGGCGATCCATGAGAGATGACACCATGTGGCAGCTGTACGAGTGGCAGCAGCGCCAGTTT 1551
Query 808 TATAACAAACAGAGCACCCTCCCTCGACACAGTACT--TTGAGTAGTCCCAAAACCATGGTAAATATTTCTGAC 879
||..||||.|||||||||||||||||.|||.| || .||||.|||||||||.|||||||..|..|.||||||
Sbjct 1552 TACCACAAGCAGAGCACCCTCCCTCGGCACGG--CTGCCTGAGCAGTCCCAAAGCCATGGTGCAGGTGTCTGAC 1623
Query 880 CAGACAATGCACTCTATTCCCACATCACCTTCCCACGGGTCAATAGCTGCTTATCAGGGATACTCCCCTCAACG 953
|||||.||||||||.||.|||||.|||||||||||.||||||..|||||||||.|||||.|.|||||||||.||
Sbjct 1624 CAGACGATGCACTCCATCCCCACGTCACCTTCCCATGGGTCAGCAGCTGCTTACCAGGGCTTCTCCCCTCAGCG 1697
Query 954 AACTTACAGATCGGAAGTGTCTTCACCAATTCAGAGAGGAGATGTGACAATAGACCGCAGACACAGGGCCCATC 1027
.||.|||||.||.||||||.|.||.||.||.|||||||||||||||||.|||||||||||.||||||.|.||||
Sbjct 1698 GACGTACAGGTCAGAAGTGACCTCGCCCATCCAGAGAGGAGATGTGACGATAGACCGCAGGCACAGGCCTCATC 1771
Query 1028 ACCCTAAGCATGTCTATGTGCCTGACAGAAGGTCAGTGCCAGCTGGCCTGACTTTACAGTCTGTTAGTCCCCAG 1101
|||||||||||||||||||..||||||||||||||.|||||||||||.|.|||||||||.||||||||||||||
Sbjct 1772 ACCCTAAGCATGTCTATGTAGCTGACAGAAGGTCAATGCCAGCTGGCTTAACTTTACAGGCTGTTAGTCCCCAG 1845
Query 1102 AGCCTCCAAGGGAAAACG-------------------------------------------------------- 1119
|||||||||||.|.||||
Sbjct 1846 AGCCTCCAAGGCAGAACGCCAGAGGAGCTCACACTGCTGCTAATAAAGCTGAGACGGCAGCAGGCAGAGCTGAG 1919
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 1920 TAGTGTCCGGGAGCACACCTTAGCACAGCTCATGCAGCTGAAACTTGAGGCCCACAGCCCAAAGAATGAGATTC 1993
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 1994 TTTCACATCATCTCCAAAGGAACACCATATATTTGGATCATCAGATGAAAGAAAATGAACCTATTATCACCATG 2067
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 2068 GTTCACACAATGATTGAGAACTCGGCGCTAAGACCACAACTGTACCAACAATTCTTAAGACAGAAGAACAAGAT 2141
Query 1120 -------------CTGTCACAAGATGAAGGTAGAGGCACATTATACAAATACAGACCTGAAGAAGTAGATATTG 1180
|||||||||||||||.||||||||||||||||||||||||||||||||||||.||.|||||
Sbjct 2142 AAGTCTCTATTGTCTGTCACAAGATGAATGTAGAGGCACATTATACAAATACAGACCTGAAGAAGCAGGTATTG 2215
Query 1181 ATGCCAAGTTAAGCCGATTATGTGAACAAGATAAAGTGGTGCATGCTCTGGAAGAGAAACTTCAGCAACTCCAC 1254
|||||||.||||||.||||.||||||||.|||||||||||.|..||.|||||.|||||.||.|||||.||.|||
Sbjct 2216 ATGCCAAATTAAGCAGATTGTGTGAACAGGATAAAGTGGTCCGAGCGCTGGAGGAGAAGCTGCAGCAGCTGCAC 2289
Query 1255 AAGGAGAAATACACGCTTGAGCAAGCTTTGCTATCAGCCAGCCAAGAGATAGAAATGCATGCAGATAACCCAGC 1328
||||||||||||||||||||||||||.|||||.||||||||||||||||||||.|||.||||.|||||||||||
Sbjct 2290 AAGGAGAAATACACGCTTGAGCAAGCCTTGCTGTCAGCCAGCCAAGAGATAGAGATGAATGCTGATAACCCAGC 2363
Query 1329 AGCCATTCAGACAGTGGTGTTACAAAGGGATGATTTACAAAATGGACTGCTTAGTACGTGTCGAGAACTTTCTC 1402
.||||||||.||.||||||||.||.||||||||..|.|||||.||||||||.||.||||||||.|||||.||.|
Sbjct 2364 TGCCATTCAAACTGTGGTGTTGCAGAGGGATGACCTGCAAAACGGACTGCTGAGCACGTGTCGGGAACTCTCCC 2437
Query 1403 GAGCCACTGCCGAATTGGAACGAGCATGGAGAGAATATGATAAGTTAGAATACGATGTAACTGTTACCAGGAAC 1476
|||||||||| |||
Sbjct 2438 GAGCCACTGC-----------------------------------TAG-------------------------- 2450
Query 1477 CAGATGCAAGAGCAGCTGGATCACCTTGGTGAAGTTCAGACGGAATCAGCAGGAATTCAGCGTGCACAGATTCA 1550
.||.||.|||||||||||.||.|||||||||||
Sbjct 2451 -----------------------------------------TGAGTCGGCAGGAATTCAACGGGCACAGATTCA 2483
Query 1551 GAAAGAACTTTGGCGAATTCAGGATGTCATGGAAGGGCTGAGTAAACATAAGCAGCAAAGAGGTACTACAGAAA 1624
.||.||.||.|||.|||||||.|||||||||||.|||.||||.|||||.||.|||||||||||..||.||||||
Sbjct 2484 AAAGGAGCTCTGGAGAATTCAAGATGTCATGGAGGGGTTGAGCAAACACAAACAGCAAAGAGGCTCTTCAGAAA 2557
Query 1625 ---TAGGTATGATAGGATCAAAGCCTTTCTCAACAGTTAAGTACAA---------------------------- 1667
|||||.||..|||||||||||||||||||.|||||||||||||
Sbjct 2558 CAGTAGGTCTGGCAGGATCAAAGCCTTTCTCATCAGTTAAGTACAAGAGCGAGGAAGAGGAAGTAGTCCCACCT 2631
Query 1668 -------------------------------------------------------------------------- 1667
Sbjct 2632 CGGCCTCCACTTCCTCGGTCTTATGACTTTACAGAGCAGCCTCCCATAATCCCCCCTCTGCCCAGTGATAGCAG 2705
Query 1668 -------------------------------------------------------------------------- 1667
Sbjct 2706 CTCCTTGCTCTGTTATAGCAGGGGCCCCGTGCATCTGCCTGAAGACAAGAAGATTCATCAAGTTCAAGGATATC 2779
Query 1668 ----AAATGAG----------GGTCCAGATTATAGACTCTACAAGAGTGAACCAGAGTTAACAACAGTGGCAGA 1727
||||| | |||||||||||||||||||||||||||||.|||||||||||.|||||||||||
Sbjct 2780 CAAGAAATG-GATCTCACTGTGGTCCAGATTATAGACTCTACAAGAGTGAGCCAGAGTTAACCACAGTGGCAGA 2852
Query 1728 AGTTGATGAATCTAATGGAGAAGAAAAATCAGAACCTGTTTCAGAGATAGAAACTTCAGTTGTTAAAGGTTCCC 1801
|||.|||||||||||.|||||||||||.|||||.||.|||||.||||.||||.||.||||.|||||||||||||
Sbjct 2853 AGTCGATGAATCTAACGGAGAAGAAAAGTCAGAGCCAGTTTCTGAGACAGAAGCTCCAGTCGTTAAAGGTTCCC 2926
Query 1802 ACTTTCCTGTTGGAGTAGTCCCTCCAAGAGCAAAATCACCAACACCCGAATCTTCGACAATAGCTTCCTATGTA 1875
|.|||||.||.|| |||.||||..|||.||||.|||||.||||||||.||.||.||.||||||||||||||.
Sbjct 2927 ATTTTCCAGTCGG---AGTTCCTCTGAGAACAAAGTCACCCACACCCGAGTCCTCCACGATAGCTTCCTATGTG 2997
Query 1876 ACCTTGAGGAAAACTAAGAAGATGATGGATCTAAGAACGGAAAGACCAAGAAGTGCAGTGGAACAGCTCTGTTT 1949
|||||||||||.||||||||||||.||||.||||||||||||||||||||||||||.|||||.|||||.|||.|
Sbjct 2998 ACCTTGAGGAAGACTAAGAAGATGGTGGAGCTAAGAACGGAAAGACCAAGAAGTGCCGTGGAGCAGCTGTGTCT 3071
Query 1950 GGCTGAAAGTACTCGACCAAGGATGACTGTGGAAGAGCAAATGGAAAGAATAAGAAGACATCAACAAGCGTGCC 2023
||||||.|||.|||||||.||.|||||||||||||||||..|.||.||.||.||.|||||.||.||.||.||||
Sbjct 3072 GGCTGAGAGTGCTCGACCTAGAATGACTGTGGAAGAGCAGCTAGAGAGGATCAGGAGACACCAGCAGGCCTGCC 3145
Query 2024 TGAGGGAGAAGAAAAAAGGGTTAAATGTTATCGGTGCTTCAGACCAGTCACCCTTACAAAGCCCTTCAAATTTA 2097
|||||||||||||.||.|||.|.|.|||..||||||||||.|| |||.|||.|..|.
Sbjct 3146 TGAGGGAGAAGAAGAAGGGGCTGAGTGTCCTCGGTGCTTCCGA------------------CCCGTCAGACGTG 3201
Query 2098 AGGGATAATCCATTTAGGACTACTCAGACTCGAAGGAGGGATGA------TAAGGAACTGGACACTG-CCATTA 2164
|||||.|.||||.|.|||..|||||||||||.|||||||||||| ||||||.||.|||||.| ||| .|
Sbjct 3202 AGGGACAGTCCACTCAGGCTTACTCAGACTCTAAGGAGGGATGATAACGTTAAGGAGCTAGACACCGTCCA-CA 3274
Query 2165 GAGAAAATGATGTAAAGCCAGACCATGAAACTCCTGCA--ACAGAAATTGT--TCAACTAAAAGAAACCGAACC 2234
|||||||||||||||||||||||.|.||.|||||.||| |||| ||| |||.|||.||||..|.|||||
Sbjct 3275 GAGAAAATGATGTAAAGCCAGACTACGAGACTCCAGCAGCACAG----TGTGCTCACCTAGAAGACGCTGAACC 3344
Query 2235 CCAAAATGTGGACTTCAGCAAAGAGTTAAAAAAAACTGAAAACATTTCATATGAAATGCTTTTTGAACCTGAGC 2308
|||.||||..|||.||.|||.|.||.|||||| .||.|||||||||||....||||||.|
Sbjct 3345 CCAGAATGCAGACATCGGCAGAAAGCTAAAAA---------------GATCTGAAATGCTTTACACACCTGAAC 3403
Query 2309 CAAATGGAGTAAATTCTGTGGAAATGATGGATAAAGAAAGAAACAAAGACAAAATGCCTGAGGATGTTACATTC 2382
||||||||.|...|||||.||||.|||.|||.||.||||||.|.|||||..|..|||.||..||||...|||.|
Sbjct 3404 CAAATGGAATGGCTTCTGAGGAAGTGACGGAGAAGGAAAGACAGAAAGAGCAGGTGCATGCCGATGGGTCATGC 3477
Query 2383 AGCCCTCAAGATGAAAC-------ACAGACCGCAAATCATAAACCAGAAGAGCATCCTGAAGAAAATACAAAGA 2449
||||||||.||.||.|| |||||.| ||||.| ..||||..|..|||||.||| .||.||
Sbjct 3478 AGCCCTCAGGAAGAGACGGCCATGACAGAGC----ATCAGA---TGGAAGGCCCCCCTGAGGAA---GCAGAG- 3540
Query 2450 ACAGTGTTGACGAACAGGAAGAAACTGTTATTTCTTACGAATCAACTCCTGAGGTTTCTAGAGGA-AATCAAAC 2522
|||.||.|.||..|||||||||||.||..|||.|..||..||.||||||||.||.|||| ||| ||||||||
Sbjct 3541 --AGTCTTCATGAGGAGGAAGAAACTCTTGCTTCCTGTGAGCCAGCTCCTGAGATTCCTAG-GGAGAATCAAAC 3611
Query 2523 AATGGCAGTGAAAAGTCTGTCCCCATCTCCTGAGTCCT---CGGCATCGCCAGTTCCATCCACTCAGCCGCAGC 2593
.| ||||||.||||||||||||.||||||||.|||| ||||| .|||.|||..||||||..||.||||
Sbjct 3612 CA---CAGTGAGAAGTCTGTCCCCGTCTCCTGACTCCTCCACGGCA---GCAGATCCGCCCACTCCTCCACAGC 3679
Query 2594 TCACAGAAGGATCACATTTCATGTGTGTG 2622
|||..||||||||.|||||||||||||||
Sbjct 3680 TCAGGGAAGGATCGCATTTCATGTGTGTG 3708
