Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12044
- Subject:
- XM_006506868.2
- Aligned Length:
- 3757
- Identities:
- 2154
- Gaps:
- 1202
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGCCGACCTGAACCTGGAGTGGATCTGCTCGCTGCCGCGCTCCTGGACGTACGGGATCACTAGGGGCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGCGTCTTCTTCATCAACGAGGAGGCCAAGAGCACCACCTGGCTACACCCGGTCACCGGCGAGGCCGTGGTCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGGGCACCGGCGGCAGAGCACAGATTTGCCCACTGGCTGGGAAGAAGCATATACGTTCGAAGGTGCAAGATAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TATATAAACCACAATGAAAGGAAAGTGACCTGCAAGCATCCGGTTACAGGACAGCCATCCCAAGACAACTGTAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTTGTTGTGAATGATCAGACTGTTGCAACCATGACGTCCGAAGACAAGAAGGAACGACCCATAAGTATGATAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGAAGCTTCCAATTACAACATGGCTTCAGATTATGCAGTGCATCCCATGAGCCCTGTGGGCAGGACCTCGCGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCTCCAAAAAGGTTCATAATTTTGGGAAAAGGTCCAATTCAATTAAAAGGAACCCTAATGCACCTGTGGTCCG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCGTGGCTGGCTGTATAAGCAGGACAGCACCGGCATGAAGCTGTGGAAGAAGCGCTGGTTTGTGCTCTCTGACC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTTGCCTTTTCTATTACCGAGATGAGAAGGAGGAGGGTATTTTGGGAAGTATCCTGTTGCCTAGTTTTCAGATA 666
Query 1 ---------------------------------------------------------------ATGCGGACCTA 11
|||||||||||
Sbjct 667 GCCATGCTCACTGCTGAGGACCACATCAATCGCAAATATGCTTTTAAGGCAGCCCACCCAAACATGCGGACCTA 740
Query 12 TTATTTCTGCACTGATACAGGAAAGGAAATGGAGTTGTGGATGAAAGCCATGTTAGATGCTGCCCTAGTACAGA 85
||||||||||||.||||||||||||||.||||||.||||||||||.|||||||||||||||||.||.||.||||
Sbjct 741 TTATTTCTGCACCGATACAGGAAAGGAGATGGAGCTGTGGATGAAGGCCATGTTAGATGCTGCTCTGGTGCAGA 814
Query 86 CAGAACCTGTGAAAA------------------GAGTGGACAAGATTACATCTGAAAATGCACCAACTAAAGAA 141
||||||||||||||| |||||||||||||||||.||||.|.||||.||||.||||||
Sbjct 815 CAGAACCTGTGAAAAGAATTACCTTTAATTTCCGAGTGGACAAGATTACAACTGACAGTGCATCAACCAAAGAA 888
Query 142 ACCAATAACATTCCCAACCATAGAGTGCTAATTAAACCAGAGATCCAAAACAATCAAAAAAACAAGGAAATGAG 215
||||||||||||||||||||.|||||.||.||||.|||.|||.||||||||.||||.||.||.||||||||.||
Sbjct 889 ACCAATAACATTCCCAACCACAGAGTTCTCATTAGACCCGAGGTCCAAAACCATCAGAAGAATAAGGAAATCAG 962
Query 216 CAAAATTGAAGAAAAAAAGGCATTAGAAGCTGAAAAATATGGATTTCAGAAGGATGGTCAAGATAGACCCTTAA 289
|||||||||||||||||.|||.|||||||||||||.|||.||||||||||||||.||.|||||||||||.||||
Sbjct 963 CAAAATTGAAGAAAAAAGGGCCTTAGAAGCTGAAAGATACGGATTTCAGAAGGACGGGCAAGATAGACCATTAA 1036
Query 290 CAAAAATTAATAGTGTAAAGCTGAATTCTCTGCCATCTGAATATGAGAGTGGGTCAGCATGCCCTGCTCAGACT 363
||||||||||.|||||.|||.||||.||.||||.|||.||||||||.||.|||.|||..|||||..||||||.|
Sbjct 1037 CAAAAATTAACAGTGTGAAGTTGAACTCCCTGCTATCAGAATATGAAAGCGGGCCAGACTGCCCACCTCAGAAT 1110
Query 364 GTGCACTACAGACCAATCAACTTGAGCAGTTCAGAGAACAAAATAGTCAATGTTAGCCTGGCAGATCTTAGAGG 437
||.|||||||||||.|||||..|||..|||||.||...||||...||.|||||.|||.||||||||.|..|.||
Sbjct 1111 GTACACTACAGACCCATCAATGTGAATAGTTCTGACGGCAAAGCGGTGAATGTCAGCTTGGCAGATGTCCGGGG 1184
Query 438 TGGAAATCGCCCCAATACAGGGCCCTTATACACAGAGGCCGATCGAGTCATACAGAGAACAAATTCAATGCAGC 511
|||.|.||.|||.|||.||||||||.||..||||||||||||.||||||||.||||||||.|||||||||||.|
Sbjct 1185 TGGGAGTCACCCAAATGCAGGGCCCCTAGCCACAGAGGCCGACCGAGTCATTCAGAGAACGAATTCAATGCAAC 1258
Query 512 AGTTGGAACAGTGGATTAAAATCCAGAAGGGGAGGGGTCATGAAGAAGAAACCAGGGGAGTAATTTCTTACCAA 585
||.|.||.||||||||||||.|||||||.||..||||||.|||||||||..||||.||||||||||||||.|||
Sbjct 1259 AGCTAGAGCAGTGGATTAAAGTCCAGAAAGGACGGGGTCTTGAAGAAGAGCCCAGAGGAGTAATTTCTTATCAA 1332
Query 586 ACATTACCAAGAAATATGCCAAGTCACAGAGCCCAGATTATGGCCCGCTACCCTGAAGGTTATAGAACACTCCC 659
|||||.|||||||||||||||||.||||||||||||||..|||||||||.||||||||||||..|.||||||||
Sbjct 1333 ACATTGCCAAGAAATATGCCAAGCCACAGAGCCCAGATCCTGGCCCGCTGCCCTGAAGGTTACCGGACACTCCC 1406
Query 660 AAGAAACAGCAAGACAAGGCCTGAAAGTATCTGCAGTGTAACCCCTTCCACTCATGACAAGACATTAGGACCCG 733
.||||||||||||||.||.|||||.|||||||||||.||||||.||||...||||||.||||| |||.||.|
Sbjct 1407 GAGAAACAGCAAGACCAGACCTGAGAGTATCTGCAGCGTAACCTCTTCTGGTCATGAGAAGAC---AGGGCCGG 1477
Query 734 GAGCGGAGGAGAAACGGAGGTCCATGAGAGATGACACAATGTGGCAGCTCTACGAATGGCAGCAGCGTCAGTTT 807
||||.||.|||||.|||.|.|||||||||||||||||.|||||||||||.|||||.|||||||||||.||||||
Sbjct 1478 GAGCAGAAGAGAAGCGGCGATCCATGAGAGATGACACCATGTGGCAGCTGTACGAGTGGCAGCAGCGCCAGTTT 1551
Query 808 TATAACAAACAGAGCACCCTCCCTCGACACAGTACT--TTGAGTAGTCCCAAAACCATGGTAAATATTTCTGAC 879
||..||||.|||||||||||||||||.|||.| || .||||.|||||||||.|||||||..|..|.||||||
Sbjct 1552 TACCACAAGCAGAGCACCCTCCCTCGGCACGG--CTGCCTGAGCAGTCCCAAAGCCATGGTGCAGGTGTCTGAC 1623
Query 880 CAGACAATGCACTCTATTCCCACATCACCTTCCCACGGGTCAATAGCTGCTTATCAGGGATACTCCCCTCAACG 953
|||||.||||||||.||.|||||.|||||||||||.||||||..|||||||||.|||||.|.|||||||||.||
Sbjct 1624 CAGACGATGCACTCCATCCCCACGTCACCTTCCCATGGGTCAGCAGCTGCTTACCAGGGCTTCTCCCCTCAGCG 1697
Query 954 AACTTACAGATCGGAAGTGTCTTCACCAATTCAGAGAGGAGATGTGACAATAGACCGCAGACACAGGGCCCATC 1027
.||.|||||.||.||||||.|.||.||.||.|||||||||||||||||.|||||||||||.||||||.|.||||
Sbjct 1698 GACGTACAGGTCAGAAGTGACCTCGCCCATCCAGAGAGGAGATGTGACGATAGACCGCAGGCACAGGCCTCATC 1771
Query 1028 ACCCTAAGCATGTCTATGTGCCTGACAGAAGGTCAGTGCCAGCTGGCCTGACTTTACAGTCTGTTAGTCCCCAG 1101
|||||||||||||||||||..||||||||||||||.|||||||||||.|.|||||||||.||||||||||||||
Sbjct 1772 ACCCTAAGCATGTCTATGTAGCTGACAGAAGGTCAATGCCAGCTGGCTTAACTTTACAGGCTGTTAGTCCCCAG 1845
Query 1102 AGCCTCCAAGGGAAAACG-------------------------------------------------------- 1119
|||||||||||.|.||||
Sbjct 1846 AGCCTCCAAGGCAGAACGAATGAGATTCTTTCACATCATCTCCAAAGGAACACCATATATTTGGATCATCAGAT 1919
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 1920 GAAAGAAAATGAACCTATTATCACCATGGTTCACACAATGATTGAGAACTCGGCGCTAAGACCACAACTGTACC 1993
Query 1120 -----------------------------------------CTGTCACAAGATGAAGGTAGAGGCACATTATAC 1152
|||||||||||||||.|||||||||||||||||
Sbjct 1994 AACAATTCTTAAGACAGAAGAACAAGATAAGTCTCTATTGTCTGTCACAAGATGAATGTAGAGGCACATTATAC 2067
Query 1153 AAATACAGACCTGAAGAAGTAGATATTGATGCCAAGTTAAGCCGATTATGTGAACAAGATAAAGTGGTGCATGC 1226
|||||||||||||||||||.||.||||||||||||.||||||.||||.||||||||.|||||||||||.|..||
Sbjct 2068 AAATACAGACCTGAAGAAGCAGGTATTGATGCCAAATTAAGCAGATTGTGTGAACAGGATAAAGTGGTCCGAGC 2141
Query 1227 TCTGGAAGAGAAACTTCAGCAACTCCACAAGGAGAAATACACGCTTGAGCAAGCTTTGCTATCAGCCAGCCAAG 1300
.|||||.|||||.||.|||||.||.|||||||||||||||||||||||||||||.|||||.|||||||||||||
Sbjct 2142 GCTGGAGGAGAAGCTGCAGCAGCTGCACAAGGAGAAATACACGCTTGAGCAAGCCTTGCTGTCAGCCAGCCAAG 2215
Query 1301 AGATAGAAATGCATGCAGATAACCCAGCAGCCATTCAGACAGTGGTGTTACAAAGGGATGATTTACAAAATGGA 1374
|||||||.|||.||||.|||||||||||.||||||||.||.||||||||.||.||||||||..|.|||||.|||
Sbjct 2216 AGATAGAGATGAATGCTGATAACCCAGCTGCCATTCAAACTGTGGTGTTGCAGAGGGATGACCTGCAAAACGGA 2289
Query 1375 CTGCTTAGTACGTGTCGAGAACTTTCTCGAGCCACTGCCGAATTGGAACGAGCATGGAGAGAATATGATAAGTT 1448
|||||.||.||||||||.|||||.||.|||||||||||.||..||||||||||.||||||||||||||.|||||
Sbjct 2290 CTGCTGAGCACGTGTCGGGAACTCTCCCGAGCCACTGCTGAGCTGGAACGAGCCTGGAGAGAATATGACAAGTT 2363
Query 1449 AGAATACGATGTAACTGTTACCAGGAACCAGATGCAAGAGCAGCTGGATCACCTTGGTGAAGTTCAGACGGAAT 1522
.|||||.|||||.||||||||||||.||||||||||.|..|||||.||.|.||||||.|||||.||||..||.|
Sbjct 2364 GGAATATGATGTGACTGTTACCAGGGACCAGATGCAGGGTCAGCTCGACCGCCTTGGAGAAGTGCAGAGTGAGT 2437
Query 1523 CAGCAGGAATTCAGCGTGCACAGATTCAGAAAGAACTTTGGCGAATTCAGGATGTCATGGAAGGGCTGAGTAAA 1596
|.|||||||||||.||.|||||||||||.||.||.||.|||.|||||||.|||||||||||.|||.||||.|||
Sbjct 2438 CGGCAGGAATTCAACGGGCACAGATTCAAAAGGAGCTCTGGAGAATTCAAGATGTCATGGAGGGGTTGAGCAAA 2511
Query 1597 CATAAGCAGCAAAGAGGTACTACAGAAA---TAGGTATGATAGGATCAAAGCCTTTCTCAACAGTTAAGTACAA 1667
||.||.|||||||||||..||.|||||| |||||.||..|||||||||||||||||||.|||||||||||||
Sbjct 2512 CACAAACAGCAAAGAGGCTCTTCAGAAACAGTAGGTCTGGCAGGATCAAAGCCTTTCTCATCAGTTAAGTACAA 2585
Query 1668 -------------------------------------------------------------------------- 1667
Sbjct 2586 GAGCGAGGAAGAGGAAGTAGTCCCACCTCGGCCTCCACTTCCTCGGTCTTATGACTTTACAGAGCAGCCTCCCA 2659
Query 1668 -------------------------------------------------------------------------- 1667
Sbjct 2660 TAATCCCCCCTCTGCCCAGTGATAGCAGCTCCTTGCTCTGTTATAGCAGGGGCCCCGTGCATCTGCCTGAAGAC 2733
Query 1668 --------------------------------AAATGAG----------GGTCCAGATTATAGACTCTACAAGA 1699
||||| | |||||||||||||||||||||||||
Sbjct 2734 AAGAAGATTCATCAAGTTCAAGGATATCCAAGAAATG-GATCTCACTGTGGTCCAGATTATAGACTCTACAAGA 2806
Query 1700 GTGAACCAGAGTTAACAACAGTGGCAGAAGTTGATGAATCTAATGGAGAAGAAAAATCAGAACCTGTTTCAGAG 1773
||||.|||||||||||.||||||||||||||.|||||||||||.|||||||||||.|||||.||.|||||.|||
Sbjct 2807 GTGAGCCAGAGTTAACCACAGTGGCAGAAGTCGATGAATCTAACGGAGAAGAAAAGTCAGAGCCAGTTTCTGAG 2880
Query 1774 ATAGAAACTTCAGTTGTTAAAGGTTCCCACTTTCCTGTTGGAGTAGTCCCTCCAAGAGCAAAATCACCAACACC 1847
|.||||.||.||||.||||||||||||||.|||||.||.|| |||.||||..|||.||||.|||||.|||||
Sbjct 2881 ACAGAAGCTCCAGTCGTTAAAGGTTCCCATTTTCCAGTCGG---AGTTCCTCTGAGAACAAAGTCACCCACACC 2951
Query 1848 CGAATCTTCGACAATAGCTTCCTATGTAACCTTGAGGAAAACTAAGAAGATGATGGATCTAAGAACGGAAAGAC 1921
|||.||.||.||.||||||||||||||.|||||||||||.||||||||||||.||||.||||||||||||||||
Sbjct 2952 CGAGTCCTCCACGATAGCTTCCTATGTGACCTTGAGGAAGACTAAGAAGATGGTGGAGCTAAGAACGGAAAGAC 3025
Query 1922 CAAGAAGTGCAGTGGAACAGCTCTGTTTGGCTGAAAGTACTCGACCAAGGATGACTGTGGAAGAGCAAATGGAA 1995
||||||||||.|||||.|||||.|||.|||||||.|||.|||||||.||.|||||||||||||||||..|.||.
Sbjct 3026 CAAGAAGTGCCGTGGAGCAGCTGTGTCTGGCTGAGAGTGCTCGACCTAGAATGACTGTGGAAGAGCAGCTAGAG 3099
Query 1996 AGAATAAGAAGACATCAACAAGCGTGCCTGAGGGAGAAGAAAAAAGGGTTAAATGTTATCGGTGCTTCAGACCA 2069
||.||.||.|||||.||.||.||.|||||||||||||||||.||.|||.|.|.|||..||||||||||.||
Sbjct 3100 AGGATCAGGAGACACCAGCAGGCCTGCCTGAGGGAGAAGAAGAAGGGGCTGAGTGTCCTCGGTGCTTCCGA--- 3170
Query 2070 GTCACCCTTACAAAGCCCTTCAAATTTAAGGGATAATCCATTTAGGACTACTCAGACTCGAAGGAGGGATGA-- 2141
|||.|||.|..|.|||||.|.||||.|.|||..|||||||||||.||||||||||||
Sbjct 3171 ---------------CCCGTCAGACGTGAGGGACAGTCCACTCAGGCTTACTCAGACTCTAAGGAGGGATGATA 3229
Query 2142 ----TAAGGAACTGGACACTG-CCATTAGAGAAAATGATGTAAAGCCAGACCATGAAACTCCTGCA--ACAGAA 2208
||||||.||.|||||.| ||| .||||||||||||||||||||||||.|.||.|||||.||| ||||
Sbjct 3230 ACGTTAAGGAGCTAGACACCGTCCA-CAGAGAAAATGATGTAAAGCCAGACTACGAGACTCCAGCAGCACAG-- 3300
Query 2209 ATTGT--TCAACTAAAAGAAACCGAACCCCAAAATGTGGACTTCAGCAAAGAGTTAAAAAAAACTGAAAACATT 2280
||| |||.|||.||||..|.||||||||.||||..|||.||.|||.|.||.||||||
Sbjct 3301 --TGTGCTCACCTAGAAGACGCTGAACCCCAGAATGCAGACATCGGCAGAAAGCTAAAAA-------------- 3358
Query 2281 TCATATGAAATGCTTTTTGAACCTGAGCCAAATGGAGTAAATTCTGTGGAAATGATGGATAAAGAAAGAAACAA 2354
.||.|||||||||||....||||||.|||||||||.|...|||||.||||.|||.|||.||.||||||.|.||
Sbjct 3359 -GATCTGAAATGCTTTACACACCTGAACCAAATGGAATGGCTTCTGAGGAAGTGACGGAGAAGGAAAGACAGAA 3431
Query 2355 AGACAAAATGCCTGAGGATGTTACATTCAGCCCTCAAGATGAAAC-------ACAGACCGCAAATCATAAACCA 2421
|||..|..|||.||..||||...|||.|||||||||.||.||.|| |||||.| ||||.| ..
Sbjct 3432 AGAGCAGGTGCATGCCGATGGGTCATGCAGCCCTCAGGAAGAGACGGCCATGACAGAGC----ATCAGA---TG 3498
Query 2422 GAAGAGCATCCTGAAGAAAATACAAAGAACAGTGTTGACGAACAGGAAGAAACTGTTATTTCTTACGAATCAAC 2495
||||..|..|||||.||| .||.|| |||.||.|.||..|||||||||||.||..|||.|..||..||.|
Sbjct 3499 GAAGGCCCCCCTGAGGAA---GCAGAG---AGTCTTCATGAGGAGGAAGAAACTCTTGCTTCCTGTGAGCCAGC 3566
Query 2496 TCCTGAGGTTTCTAGAGGA-AATCAAACAATGGCAGTGAAAAGTCTGTCCCCATCTCCTGAGTCCT---CGGCA 2565
|||||||.||.|||| ||| ||||||||.| ||||||.||||||||||||.||||||||.|||| |||||
Sbjct 3567 TCCTGAGATTCCTAG-GGAGAATCAAACCA---CAGTGAGAAGTCTGTCCCCGTCTCCTGACTCCTCCACGGCA 3636
Query 2566 TCGCCAGTTCCATCCACTCAGCCGCAGCTCACAGAAGGATCACATTTCATGTGTGTG 2622
.|||.|||..||||||..||.|||||||..||||||||.|||||||||||||||
Sbjct 3637 ---GCAGATCCGCCCACTCCTCCACAGCTCAGGGAAGGATCGCATTTCATGTGTGTG 3690
