Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12044
- Subject:
- XM_006506871.2
- Aligned Length:
- 3640
- Identities:
- 2154
- Gaps:
- 1085
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGCCGACCTGAACCTGGAGTGGATCTGCTCGCTGCCGCGCTCCTGGACGTACGGGATCACTAGGGGCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGCGTCTTCTTCATCAACGAGGAGGCCAAGAGCACCACCTGGCTACACCCGGTCACCGGCGAGGCCGTGGTCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGGGCACCGGCGGCAGAGCACAGATTTGCCCACTGGCTGGGAAGAAGCATATACGTTCGAAGGTGCAAGATAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TATATAAACCACAATGAAAGGAAAGTGACCTGCAAGCATCCGGTTACAGGACAGCCATCCCAAGACAACTGTAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTTGTTGTGAATGATCAGACTGTTGCAACCATGACGTCCGAAGACAAGAAGGAACGACCCATAAGTATGATAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGAAGCTTCCAATTACAACATGGCTTCAGATTATGCAGTGCATCCCATGAGCCCTGTGGGCAGGACCTCGCGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCTCCAAAAAGGTTCATAATTTTGGGAAAAGGTCCAATTCAATTAAAAGGAACCCTAATGCACCTGTGGTCCG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCGTGGCTGGCTGTATAAGCAGGACAGCACCGGCATGAAGCTGTGGAAGAAGCGCTGGTTTGTGCTCTCTGACC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTTGCCTTTTCTATTACCGAGATGAGAAGGAGGAGGGTATTTTGGGAAGTATCCTGTTGCCTAGTTTTCAGATA 666
Query 1 ---------------------------------------------------------------ATGCGGACCTA 11
|||||||||||
Sbjct 667 GCCATGCTCACTGCTGAGGACCACATCAATCGCAAATATGCTTTTAAGGCAGCCCACCCAAACATGCGGACCTA 740
Query 12 TTATTTCTGCACTGATACAGGAAAGGAAATGGAGTTGTGGATGAAAGCCATGTTAGATGCTGCCCTAGTACAGA 85
||||||||||||.||||||||||||||.||||||.||||||||||.|||||||||||||||||.||.||.||||
Sbjct 741 TTATTTCTGCACCGATACAGGAAAGGAGATGGAGCTGTGGATGAAGGCCATGTTAGATGCTGCTCTGGTGCAGA 814
Query 86 CAGAACCTGTGAAAA------------------GAGTGGACAAGATTACATCTGAAAATGCACCAACTAAAGAA 141
||||||||||||||| |||||||||||||||||.||||.|.||||.||||.||||||
Sbjct 815 CAGAACCTGTGAAAAGAATTACCTTTAATTTCCGAGTGGACAAGATTACAACTGACAGTGCATCAACCAAAGAA 888
Query 142 ACCAATAACATTCCCAACCATAGAGTGCTAATTAAACCAGAGATCCAAAACAATCAAAAAAACAAGGAAATGAG 215
||||||||||||||||||||.|||||.||.||||.|||.|||.||||||||.||||.||.||.||||||||.||
Sbjct 889 ACCAATAACATTCCCAACCACAGAGTTCTCATTAGACCCGAGGTCCAAAACCATCAGAAGAATAAGGAAATCAG 962
Query 216 CAAAATTGAAGAAAAAAAGGCATTAGAAGCTGAAAAATATGGATTTCAGAAGGATGGTCAAGATAGACCCTTAA 289
|||||||||||||||||.|||.|||||||||||||.|||.||||||||||||||.||.|||||||||||.||||
Sbjct 963 CAAAATTGAAGAAAAAAGGGCCTTAGAAGCTGAAAGATACGGATTTCAGAAGGACGGGCAAGATAGACCATTAA 1036
Query 290 CAAAAATTAATAGTGTAAAGCTGAATTCTCTGCCATCTGAATATGAGAGTGGGTCAGCATGCCCTGCTCAGACT 363
||||||||||.|||||.|||.||||.||.||||.|||.||||||||.||.|||.|||..|||||..||||||.|
Sbjct 1037 CAAAAATTAACAGTGTGAAGTTGAACTCCCTGCTATCAGAATATGAAAGCGGGCCAGACTGCCCACCTCAGAAT 1110
Query 364 GTGCACTACAGACCAATCAACTTGAGCAGTTCAGAGAACAAAATAGTCAATGTTAGCCTGGCAGATCTTAGAGG 437
||.|||||||||||.|||||..|||..|||||.||...||||...||.|||||.|||.||||||||.|..|.||
Sbjct 1111 GTACACTACAGACCCATCAATGTGAATAGTTCTGACGGCAAAGCGGTGAATGTCAGCTTGGCAGATGTCCGGGG 1184
Query 438 TGGAAATCGCCCCAATACAGGGCCCTTATACACAGAGGCCGATCGAGTCATACAGAGAACAAATTCAATGCAGC 511
|||.|.||.|||.|||.||||||||.||..||||||||||||.||||||||.||||||||.|||||||||||.|
Sbjct 1185 TGGGAGTCACCCAAATGCAGGGCCCCTAGCCACAGAGGCCGACCGAGTCATTCAGAGAACGAATTCAATGCAAC 1258
Query 512 AGTTGGAACAGTGGATTAAAATCCAGAAGGGGAGGGGTCATGAAGAAGAAACCAGGGGAGTAATTTCTTACCAA 585
||.|.||.||||||||||||.|||||||.||..||||||.|||||||||..||||.||||||||||||||.|||
Sbjct 1259 AGCTAGAGCAGTGGATTAAAGTCCAGAAAGGACGGGGTCTTGAAGAAGAGCCCAGAGGAGTAATTTCTTATCAA 1332
Query 586 ACATTACCAAGAAATATGCCAAGTCACAGAGCCCAGATTATGGCCCGCTACCCTGAAGGTTATAGAACACTCCC 659
|||||.|||||||||||||||||.||||||||||||||..|||||||||.||||||||||||..|.||||||||
Sbjct 1333 ACATTGCCAAGAAATATGCCAAGCCACAGAGCCCAGATCCTGGCCCGCTGCCCTGAAGGTTACCGGACACTCCC 1406
Query 660 AAGAAACAGCAAGACAAGGCCTGAAAGTATCTGCAGTGTAACCCCTTCCACTCATGACAAGACATTAGGACCCG 733
.||||||||||||||.||.|||||.|||||||||||.||||||.||||...||||||.||||| |||.||.|
Sbjct 1407 GAGAAACAGCAAGACCAGACCTGAGAGTATCTGCAGCGTAACCTCTTCTGGTCATGAGAAGAC---AGGGCCGG 1477
Query 734 GAGCGGAGGAGAAACGGAGGTCCATGAGAGATGACACAATGTGGCAGCTCTACGAATGGCAGCAGCGTCAGTTT 807
||||.||.|||||.|||.|.|||||||||||||||||.|||||||||||.|||||.|||||||||||.||||||
Sbjct 1478 GAGCAGAAGAGAAGCGGCGATCCATGAGAGATGACACCATGTGGCAGCTGTACGAGTGGCAGCAGCGCCAGTTT 1551
Query 808 TATAACAAACAGAGCACCCTCCCTCGACACAGTACT--TTGAGTAGTCCCAAAACCATGGTAAATATTTCTGAC 879
||..||||.|||||||||||||||||.|||.| || .||||.|||||||||.|||||||..|..|.||||||
Sbjct 1552 TACCACAAGCAGAGCACCCTCCCTCGGCACGG--CTGCCTGAGCAGTCCCAAAGCCATGGTGCAGGTGTCTGAC 1623
Query 880 CAGACAATGCACTCTATTCCCACATCACCTTCCCACGGGTCAATAGCTGCTTATCAGGGATACTCCCCTCAACG 953
|||||.||||||||.||.|||||.|||||||||||.||||||..|||||||||.|||||.|.|||||||||.||
Sbjct 1624 CAGACGATGCACTCCATCCCCACGTCACCTTCCCATGGGTCAGCAGCTGCTTACCAGGGCTTCTCCCCTCAGCG 1697
Query 954 AACTTACAGATCGGAAGTGTCTTCACCAATTCAGAGAGGAGATGTGACAATAGACCGCAGACACAGGGCCCATC 1027
.||.|||||.||.||||||.|.||.||.||.|||||||||||||||||.|||||||||||.||||||.|.||||
Sbjct 1698 GACGTACAGGTCAGAAGTGACCTCGCCCATCCAGAGAGGAGATGTGACGATAGACCGCAGGCACAGGCCTCATC 1771
Query 1028 ACCCTAAGCATGTCTATGTGCCTGACAGAAGGTCAGTGCCAGCTGGCCTGACTTTACAGTCTGTTAGTCCCCAG 1101
|||||||||||||||||||..||||||||||||||.|||||||||||.|.|||||||||.||||||||||||||
Sbjct 1772 ACCCTAAGCATGTCTATGTAGCTGACAGAAGGTCAATGCCAGCTGGCTTAACTTTACAGGCTGTTAGTCCCCAG 1845
Query 1102 AGCCTCCAAGGGAAAAC------------------------------------------------------GCT 1121
|||||||||||.|.||| |||
Sbjct 1846 AGCCTCCAAGGCAGAACGAATGAGATTCTTTCACATCATCTCCAAAGGAACACCATATATTTGGATCATCAGCT 1919
Query 1122 GTCACAAGATGAAGGTAGAGGCACATTATACAAATACAGACCTGAAGAAGTAGATATTGATGCCAAGTTAAGCC 1195
|||||||||||||.||||||||||||||||||||||||||||||||||||.||.||||||||||||.||||||.
Sbjct 1920 GTCACAAGATGAATGTAGAGGCACATTATACAAATACAGACCTGAAGAAGCAGGTATTGATGCCAAATTAAGCA 1993
Query 1196 GATTATGTGAACAAGATAAAGTGGTGCATGCTCTGGAAGAGAAACTTCAGCAACTCCACAAGGAGAAATACACG 1269
||||.||||||||.|||||||||||.|..||.|||||.|||||.||.|||||.||.||||||||||||||||||
Sbjct 1994 GATTGTGTGAACAGGATAAAGTGGTCCGAGCGCTGGAGGAGAAGCTGCAGCAGCTGCACAAGGAGAAATACACG 2067
Query 1270 CTTGAGCAAGCTTTGCTATCAGCCAGCCAAGAGATAGAAATGCATGCAGATAACCCAGCAGCCATTCAGACAGT 1343
|||||||||||.|||||.||||||||||||||||||||.|||.||||.|||||||||||.||||||||.||.||
Sbjct 2068 CTTGAGCAAGCCTTGCTGTCAGCCAGCCAAGAGATAGAGATGAATGCTGATAACCCAGCTGCCATTCAAACTGT 2141
Query 1344 GGTGTTACAAAGGGATGATTTACAAAATGGACTGCTTAGTACGTGTCGAGAACTTTCTCGAGCCACTGCCGAAT 1417
||||||.||.||||||||..|.|||||.||||||||.||.||||||||.|||||.||.|||||||||||.||..
Sbjct 2142 GGTGTTGCAGAGGGATGACCTGCAAAACGGACTGCTGAGCACGTGTCGGGAACTCTCCCGAGCCACTGCTGAGC 2215
Query 1418 TGGAACGAGCATGGAGAGAATATGATAAGTTAGAATACGATGTAACTGTTACCAGGAACCAGATGCAAGAGCAG 1491
||||||||||.||||||||||||||.|||||.|||||.|||||.||||||||||||.||||||||||.|..|||
Sbjct 2216 TGGAACGAGCCTGGAGAGAATATGACAAGTTGGAATATGATGTGACTGTTACCAGGGACCAGATGCAGGGTCAG 2289
Query 1492 CTGGATCACCTTGGTGAAGTTCAGACGGAATCAGCAGGAATTCAGCGTGCACAGATTCAGAAAGAACTTTGGCG 1565
||.||.|.||||||.|||||.||||..||.||.|||||||||||.||.|||||||||||.||.||.||.|||.|
Sbjct 2290 CTCGACCGCCTTGGAGAAGTGCAGAGTGAGTCGGCAGGAATTCAACGGGCACAGATTCAAAAGGAGCTCTGGAG 2363
Query 1566 AATTCAGGATGTCATGGAAGGGCTGAGTAAACATAAGCAGCAAAGAGGTACTACAGAAA---TAGGTATGATAG 1636
||||||.|||||||||||.|||.||||.|||||.||.|||||||||||..||.|||||| |||||.||..||
Sbjct 2364 AATTCAAGATGTCATGGAGGGGTTGAGCAAACACAAACAGCAAAGAGGCTCTTCAGAAACAGTAGGTCTGGCAG 2437
Query 1637 GATCAAAGCCTTTCTCAACAGTTAAGTACAA------------------------------------------- 1667
|||||||||||||||||.|||||||||||||
Sbjct 2438 GATCAAAGCCTTTCTCATCAGTTAAGTACAAGAGCGAGGAAGAGGAAGTAGTCCCACCTCGGCCTCCACTTCCT 2511
Query 1668 -------------------------------------------------------------------------- 1667
Sbjct 2512 CGGTCTTATGACTTTACAGAGCAGCCTCCCATAATCCCCCCTCTGCCCAGTGATAGCAGCTCCTTGCTCTGTTA 2585
Query 1668 ---------------------------------------------------------------AAATGAG---- 1674
||||| |
Sbjct 2586 TAGCAGGGGCCCCGTGCATCTGCCTGAAGACAAGAAGATTCATCAAGTTCAAGGATATCCAAGAAATG-GATCT 2658
Query 1675 ------GGTCCAGATTATAGACTCTACAAGAGTGAACCAGAGTTAACAACAGTGGCAGAAGTTGATGAATCTAA 1742
|||||||||||||||||||||||||||||.|||||||||||.||||||||||||||.|||||||||||
Sbjct 2659 CACTGTGGTCCAGATTATAGACTCTACAAGAGTGAGCCAGAGTTAACCACAGTGGCAGAAGTCGATGAATCTAA 2732
Query 1743 TGGAGAAGAAAAATCAGAACCTGTTTCAGAGATAGAAACTTCAGTTGTTAAAGGTTCCCACTTTCCTGTTGGAG 1816
.|||||||||||.|||||.||.|||||.||||.||||.||.||||.||||||||||||||.|||||.||.||
Sbjct 2733 CGGAGAAGAAAAGTCAGAGCCAGTTTCTGAGACAGAAGCTCCAGTCGTTAAAGGTTCCCATTTTCCAGTCGG-- 2804
Query 1817 TAGTCCCTCCAAGAGCAAAATCACCAACACCCGAATCTTCGACAATAGCTTCCTATGTAACCTTGAGGAAAACT 1890
|||.||||..|||.||||.|||||.||||||||.||.||.||.||||||||||||||.|||||||||||.|||
Sbjct 2805 -AGTTCCTCTGAGAACAAAGTCACCCACACCCGAGTCCTCCACGATAGCTTCCTATGTGACCTTGAGGAAGACT 2877
Query 1891 AAGAAGATGATGGATCTAAGAACGGAAAGACCAAGAAGTGCAGTGGAACAGCTCTGTTTGGCTGAAAGTACTCG 1964
|||||||||.||||.||||||||||||||||||||||||||.|||||.|||||.|||.|||||||.|||.||||
Sbjct 2878 AAGAAGATGGTGGAGCTAAGAACGGAAAGACCAAGAAGTGCCGTGGAGCAGCTGTGTCTGGCTGAGAGTGCTCG 2951
Query 1965 ACCAAGGATGACTGTGGAAGAGCAAATGGAAAGAATAAGAAGACATCAACAAGCGTGCCTGAGGGAGAAGAAAA 2038
|||.||.|||||||||||||||||..|.||.||.||.||.|||||.||.||.||.|||||||||||||||||.|
Sbjct 2952 ACCTAGAATGACTGTGGAAGAGCAGCTAGAGAGGATCAGGAGACACCAGCAGGCCTGCCTGAGGGAGAAGAAGA 3025
Query 2039 AAGGGTTAAATGTTATCGGTGCTTCAGACCAGTCACCCTTACAAAGCCCTTCAAATTTAAGGGATAATCCATTT 2112
|.|||.|.|.|||..||||||||||.|| |||.|||.|..|.|||||.|.||||.|.
Sbjct 3026 AGGGGCTGAGTGTCCTCGGTGCTTCCGA------------------CCCGTCAGACGTGAGGGACAGTCCACTC 3081
Query 2113 AGGACTACTCAGACTCGAAGGAGGGATGA------TAAGGAACTGGACACTG-CCATTAGAGAAAATGATGTAA 2179
|||..|||||||||||.|||||||||||| ||||||.||.|||||.| ||| .||||||||||||||||
Sbjct 3082 AGGCTTACTCAGACTCTAAGGAGGGATGATAACGTTAAGGAGCTAGACACCGTCCA-CAGAGAAAATGATGTAA 3154
Query 2180 AGCCAGACCATGAAACTCCTGCA--ACAGAAATTGT--TCAACTAAAAGAAACCGAACCCCAAAATGTGGACTT 2249
||||||||.|.||.|||||.||| |||| ||| |||.|||.||||..|.||||||||.||||..|||.|
Sbjct 3155 AGCCAGACTACGAGACTCCAGCAGCACAG----TGTGCTCACCTAGAAGACGCTGAACCCCAGAATGCAGACAT 3224
Query 2250 CAGCAAAGAGTTAAAAAAAACTGAAAACATTTCATATGAAATGCTTTTTGAACCTGAGCCAAATGGAGTAAATT 2323
|.|||.|.||.|||||| .||.|||||||||||....||||||.|||||||||.|...||
Sbjct 3225 CGGCAGAAAGCTAAAAA---------------GATCTGAAATGCTTTACACACCTGAACCAAATGGAATGGCTT 3283
Query 2324 CTGTGGAAATGATGGATAAAGAAAGAAACAAAGACAAAATGCCTGAGGATGTTACATTCAGCCCTCAAGATGAA 2397
|||.||||.|||.|||.||.||||||.|.|||||..|..|||.||..||||...|||.|||||||||.||.||.
Sbjct 3284 CTGAGGAAGTGACGGAGAAGGAAAGACAGAAAGAGCAGGTGCATGCCGATGGGTCATGCAGCCCTCAGGAAGAG 3357
Query 2398 AC-------ACAGACCGCAAATCATAAACCAGAAGAGCATCCTGAAGAAAATACAAAGAACAGTGTTGACGAAC 2464
|| |||||.| ||||.| ..||||..|..|||||.||| .||.|| |||.||.|.||..
Sbjct 3358 ACGGCCATGACAGAGC----ATCAGA---TGGAAGGCCCCCCTGAGGAA---GCAGAG---AGTCTTCATGAGG 3418
Query 2465 AGGAAGAAACTGTTATTTCTTACGAATCAACTCCTGAGGTTTCTAGAGGA-AATCAAACAATGGCAGTGAAAAG 2537
|||||||||||.||..|||.|..||..||.||||||||.||.|||| ||| ||||||||.| ||||||.|||
Sbjct 3419 AGGAAGAAACTCTTGCTTCCTGTGAGCCAGCTCCTGAGATTCCTAG-GGAGAATCAAACCA---CAGTGAGAAG 3488
Query 2538 TCTGTCCCCATCTCCTGAGTCCT---CGGCATCGCCAGTTCCATCCACTCAGCCGCAGCTCACAGAAGGATCAC 2608
|||||||||.||||||||.|||| ||||| .|||.|||..||||||..||.|||||||..||||||||.|
Sbjct 3489 TCTGTCCCCGTCTCCTGACTCCTCCACGGCA---GCAGATCCGCCCACTCCTCCACAGCTCAGGGAAGGATCGC 3559
Query 2609 ATTTCATGTGTGTG 2622
||||||||||||||
Sbjct 3560 ATTTCATGTGTGTG 3573
