Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12044
- Subject:
- XM_006506874.2
- Aligned Length:
- 3583
- Identities:
- 2153
- Gaps:
- 1028
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGCCGACCTGAACCTGGAGTGGATCTGCTCGCTGCCGCGCTCCTGGACGTACGGGATCACTAGGGGCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGCGTCTTCTTCATCAACGAGGAGGCCAAGAGCACCACCTGGCTACACCCGGTCACCGGCGAGGCCGTGGTCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGGGCACCGGCGGCAGAGCACAGATTTGCCCACTGGCTGGGAAGAAGCATATACGTTCGAAGGTGCAAGATAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TATATAAACCACAATGAAAGGAAAGTGACCTGCAAGCATCCGGTTACAGGACAGCCATCCCAAGACAACTGTAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTTGTTGTGAATGATCAGACTGTTGCAACCATGACGTCCGAAGACAAGAAGGAACGACCCATAAGTATGATAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGAAGCTTCCAATTACAACATGGCTTCAGATTATGCAGTGCATCCCATGAGCCCTGTGGGCAGGACCTCGCGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCTCCAAAAAGGTTCATAATTTTGGGAAAAGGTCCAATTCAATTAAAAGGAACCCTAATGCACCTGTGGTCCG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCGTGGCTGGCTGTATAAGCAGGACAGCACCGGCATGAAGCTGTGGAAGAAGCGCTGGTTTGTGCTCTCTGACC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTTGCCTTTTCTATTACCGAGATGAGAAGGAGGAGGGTATTTTGGGAAGTATCCTGTTGCCTAGTTTTCAGATA 666
Query 1 ---------------------------------------------------------------ATGCGGACCTA 11
|||||||||||
Sbjct 667 GCCATGCTCACTGCTGAGGACCACATCAATCGCAAATATGCTTTTAAGGCAGCCCACCCAAACATGCGGACCTA 740
Query 12 TTATTTCTGCACTGATACAGGAAAGGAAATGGAGTTGTGGATGAAAGCCATGTTAGATGCTGCCCTAGTACAGA 85
||||||||||||.||||||||||||||.||||||.||||||||||.|||||||||||||||||.||.||.||||
Sbjct 741 TTATTTCTGCACCGATACAGGAAAGGAGATGGAGCTGTGGATGAAGGCCATGTTAGATGCTGCTCTGGTGCAGA 814
Query 86 CAGAACCTGTGAAAA------------------GAGTGGACAAGATTACATCTGAAAATGCACCAACTAAAGAA 141
||||||||||||||| |||||||||||||||||.||||.|.||||.||||.||||||
Sbjct 815 CAGAACCTGTGAAAAGAATTACCTTTAATTTCCGAGTGGACAAGATTACAACTGACAGTGCATCAACCAAAGAA 888
Query 142 ACCAATAACATTCCCAACCATAGAGTGCTAATTAAACCAGAGATCCAAAACAATCAAAAAAACAAGGAAATGAG 215
||||||||||||||||||||.|||||.||.||||.|||.|||.||||||||.||||.||.||.||||||||.||
Sbjct 889 ACCAATAACATTCCCAACCACAGAGTTCTCATTAGACCCGAGGTCCAAAACCATCAGAAGAATAAGGAAATCAG 962
Query 216 CAAAATTGAAGAAAAAAAGGCATTAGAAGCTGAAAAATATGGATTTCAGAAGGATGGTCAAGATAGACCCTTAA 289
|||||||||||||||||.|||.|||||||||||||.|||.||||||||||||||.||.|||||||||||.||||
Sbjct 963 CAAAATTGAAGAAAAAAGGGCCTTAGAAGCTGAAAGATACGGATTTCAGAAGGACGGGCAAGATAGACCATTAA 1036
Query 290 CAAAAATTAATAGTGTAAAGCTGAATTCTCTGCCATCTGAATATGAGAGTGGGTCAGCATGCCCTGCTCAGACT 363
||||||||||.|||||.|||.||||.||.||||.|||.||||||||.||.|||.|||..|||||..||||||.|
Sbjct 1037 CAAAAATTAACAGTGTGAAGTTGAACTCCCTGCTATCAGAATATGAAAGCGGGCCAGACTGCCCACCTCAGAAT 1110
Query 364 GTGCACTACAGACCAATCAACTTGAGCAGTTCAGAGAACAAAATAGTCAATGTTAGCCTGGCAGATCTTAGAGG 437
||.|||||||||||.|||||..|||..|||||.||...||||...||.|||||.|||.||||||||.|..|.||
Sbjct 1111 GTACACTACAGACCCATCAATGTGAATAGTTCTGACGGCAAAGCGGTGAATGTCAGCTTGGCAGATGTCCGGGG 1184
Query 438 TGGAAATCGCCCCAATACAGGGCCCTTATACACAGAGGCCGATCGAGTCATACAGAGAACAAATTCAATGCAGC 511
|||.|.||.|||.|||.||||||||.||..||||||||||||.||||||||.||||||||.|||||||||||.|
Sbjct 1185 TGGGAGTCACCCAAATGCAGGGCCCCTAGCCACAGAGGCCGACCGAGTCATTCAGAGAACGAATTCAATGCAAC 1258
Query 512 AGTTGGAACAGTGGATTAAAATCCAGAAGGGGAGGGGTCATGAAGAAGAAACCAGGGGAGTAATTTCTTACCAA 585
||.|.||.||||||||||||.|||||||.||..||||||.|||||||||..||||.||||||||||||||.|||
Sbjct 1259 AGCTAGAGCAGTGGATTAAAGTCCAGAAAGGACGGGGTCTTGAAGAAGAGCCCAGAGGAGTAATTTCTTATCAA 1332
Query 586 ACATTACCAAGAAATATGCCAAGTCACAGAGCCCAGATTATGGCCCGCTACCCTGAAGGTTATAGAACACTCCC 659
|||||.|||||||||||||||||.||||||||||||||..|||||||||.||||||||||||..|.||||||||
Sbjct 1333 ACATTGCCAAGAAATATGCCAAGCCACAGAGCCCAGATCCTGGCCCGCTGCCCTGAAGGTTACCGGACACTCCC 1406
Query 660 AAGAAACAGCAAGACAAGGCCTGAAAGTATCTGCAGTGTAACCCCTTCCACTCATGACAAGACATTAGGACCCG 733
.||||||||||||||.||.|||||.|||||||||||.||||||.||||...||||||.||||| |||.||.|
Sbjct 1407 GAGAAACAGCAAGACCAGACCTGAGAGTATCTGCAGCGTAACCTCTTCTGGTCATGAGAAGAC---AGGGCCGG 1477
Query 734 GAGCGGAGGAGAAACGGAGGTCCATGAGAGATGACACAATGTGGCAGCTCTACGAATGGCAGCAGCGTCAGTTT 807
||||.||.|||||.|||.|.|||||||||||||||||.|||||||||||.|||||.|||||||||||.||||||
Sbjct 1478 GAGCAGAAGAGAAGCGGCGATCCATGAGAGATGACACCATGTGGCAGCTGTACGAGTGGCAGCAGCGCCAGTTT 1551
Query 808 TATAACAAACAGAGCACCCTCCCTCGACACAGTACT--TTGAGTAGTCCCAAAACCATGGTAAATATTTCTGAC 879
||..||||.|||||||||||||||||.|||.| || .||||.|||||||||.|||||||..|..|.||||||
Sbjct 1552 TACCACAAGCAGAGCACCCTCCCTCGGCACGG--CTGCCTGAGCAGTCCCAAAGCCATGGTGCAGGTGTCTGAC 1623
Query 880 CAGACAATGCACTCTATTCCCACATCACCTTCCCACGGGTCAATAGCTGCTTATCAGGGATACTCCCCTCAACG 953
|||||.||||||||.||.|||||.|||||||||||.||||||..|||||||||.|||||.|.|||||||||.||
Sbjct 1624 CAGACGATGCACTCCATCCCCACGTCACCTTCCCATGGGTCAGCAGCTGCTTACCAGGGCTTCTCCCCTCAGCG 1697
Query 954 AACTTACAGATCGGAAGTGTCTTCACCAATTCAGAGAGGAGATGTGACAATAGACCGCAGACACAGGGCCCATC 1027
.||.|||||.||.||||||.|.||.||.||.|||||||||||||||||.|||||||||||.||||||.|.||||
Sbjct 1698 GACGTACAGGTCAGAAGTGACCTCGCCCATCCAGAGAGGAGATGTGACGATAGACCGCAGGCACAGGCCTCATC 1771
Query 1028 ACCCTAAGCATGTCTATGTGCCTGACAGAAGGTCAGTGCCAGCTGGCCTGACTTTACAGTCTGTTAGTCCCCAG 1101
|||||||||||||||||||..||||||||||||||.|||||||||||.|.|||||||||.||||||||||||||
Sbjct 1772 ACCCTAAGCATGTCTATGTAGCTGACAGAAGGTCAATGCCAGCTGGCTTAACTTTACAGGCTGTTAGTCCCCAG 1845
Query 1102 AGCCTCCAAGGGAAAACGCTGTCACAAGATGAAGGTAGAGGCACATTATACAAATACAGACCTGAAGAAGTAGA 1175
|||||||||||.|.|||||||||||||||||||.||||||||||||||||||||||||||||||||||||.||.
Sbjct 1846 AGCCTCCAAGGCAGAACGCTGTCACAAGATGAATGTAGAGGCACATTATACAAATACAGACCTGAAGAAGCAGG 1919
Query 1176 TATTGATGCCAAGTTAAGCCGATTATGTGAACAAGATAAAGTGGTGCATGCTCTGGAAGAGAAACTTCAGCAAC 1249
||||||||||||.||||||.||||.||||||||.|||||||||||.|..||.|||||.|||||.||.|||||.|
Sbjct 1920 TATTGATGCCAAATTAAGCAGATTGTGTGAACAGGATAAAGTGGTCCGAGCGCTGGAGGAGAAGCTGCAGCAGC 1993
Query 1250 TCCACAAGGAGAAATACACGCTTGAGCAAGCTTTGCTATCAGCCAGCCAAGAGATAGAAATGCATGCAGATAAC 1323
|.|||||||||||||||||||||||||||||.|||||.||||||||||||||||||||.|||.||||.||||||
Sbjct 1994 TGCACAAGGAGAAATACACGCTTGAGCAAGCCTTGCTGTCAGCCAGCCAAGAGATAGAGATGAATGCTGATAAC 2067
Query 1324 CCAGCAGCCATTCAGACAGTGGTGTTACAAAGGGATGATTTACAAAATGGACTGCTTAGTACGTGTCGAGAACT 1397
|||||.||||||||.||.||||||||.||.||||||||..|.|||||.||||||||.||.||||||||.|||||
Sbjct 2068 CCAGCTGCCATTCAAACTGTGGTGTTGCAGAGGGATGACCTGCAAAACGGACTGCTGAGCACGTGTCGGGAACT 2141
Query 1398 TTCTCGAGCCACTGCCGAATTGGAACGAGCATGGAGAGAATATGATAAGTTAGAATACGATGTAACTGTTACCA 1471
.||.|||||||||||.||..||||||||||.||||||||||||||.|||||.|||||.|||||.||||||||||
Sbjct 2142 CTCCCGAGCCACTGCTGAGCTGGAACGAGCCTGGAGAGAATATGACAAGTTGGAATATGATGTGACTGTTACCA 2215
Query 1472 GGAACCAGATGCAAGAGCAGCTGGATCACCTTGGTGAAGTTCAGACGGAATCAGCAGGAATTCAGCGTGCACAG 1545
||.||||||||||.|..|||||.||.|.||||||.|||||.||||..||.||.|||||||||||.||.||||||
Sbjct 2216 GGGACCAGATGCAGGGTCAGCTCGACCGCCTTGGAGAAGTGCAGAGTGAGTCGGCAGGAATTCAACGGGCACAG 2289
Query 1546 ATTCAGAAAGAACTTTGGCGAATTCAGGATGTCATGGAAGGGCTGAGTAAACATAAGCAGCAAAGAGGTACTAC 1619
|||||.||.||.||.|||.|||||||.|||||||||||.|||.||||.|||||.||.|||||||||||..||.|
Sbjct 2290 ATTCAAAAGGAGCTCTGGAGAATTCAAGATGTCATGGAGGGGTTGAGCAAACACAAACAGCAAAGAGGCTCTTC 2363
Query 1620 AGAAATAGGTATGATAGGATCAAAGCCTTTCTCAACAGTTAAGTACAA-------------------------- 1667
|||||.||||.||..|||||||||||||||||||.|||||||||||||
Sbjct 2364 AGAAACAGGTCTGGCAGGATCAAAGCCTTTCTCATCAGTTAAGTACAAGAGCGAGGAAGAGGAAGTAGTCCCAC 2437
Query 1668 -------------------------------------------------------------------------- 1667
Sbjct 2438 CTCGGCCTCCACTTCCTCGGTCTTATGACTTTACAGAGCAGCCTCCCATAATCCCCCCTCTGCCCAGTGATAGC 2511
Query 1668 -------------------------------------------------------------------------- 1667
Sbjct 2512 AGCTCCTTGCTCTGTTATAGCAGGGGCCCCGTGCATCTGCCTGAAGACAAGAAGATTCATCAAGTTCAAGGATA 2585
Query 1668 ------AAATGAG----------GGTCCAGATTATAGACTCTACAAGAGTGAACCAGAGTTAACAACAGTGGCA 1725
||||| | |||||||||||||||||||||||||||||.|||||||||||.|||||||||
Sbjct 2586 TCCAAGAAATG-GATCTCACTGTGGTCCAGATTATAGACTCTACAAGAGTGAGCCAGAGTTAACCACAGTGGCA 2658
Query 1726 GAAGTTGATGAATCTAATGGAGAAGAAAAATCAGAACCTGTTTCAGAGATAGAAACTTCAGTTGTTAAAGGTTC 1799
|||||.|||||||||||.|||||||||||.|||||.||.|||||.||||.||||.||.||||.|||||||||||
Sbjct 2659 GAAGTCGATGAATCTAACGGAGAAGAAAAGTCAGAGCCAGTTTCTGAGACAGAAGCTCCAGTCGTTAAAGGTTC 2732
Query 1800 CCACTTTCCTGTTGGAGTAGTCCCTCCAAGAGCAAAATCACCAACACCCGAATCTTCGACAATAGCTTCCTATG 1873
|||.|||||.||.|| |||.||||..|||.||||.|||||.||||||||.||.||.||.|||||||||||||
Sbjct 2733 CCATTTTCCAGTCGG---AGTTCCTCTGAGAACAAAGTCACCCACACCCGAGTCCTCCACGATAGCTTCCTATG 2803
Query 1874 TAACCTTGAGGAAAACTAAGAAGATGATGGATCTAAGAACGGAAAGACCAAGAAGTGCAGTGGAACAGCTCTGT 1947
|.|||||||||||.||||||||||||.||||.||||||||||||||||||||||||||.|||||.|||||.|||
Sbjct 2804 TGACCTTGAGGAAGACTAAGAAGATGGTGGAGCTAAGAACGGAAAGACCAAGAAGTGCCGTGGAGCAGCTGTGT 2877
Query 1948 TTGGCTGAAAGTACTCGACCAAGGATGACTGTGGAAGAGCAAATGGAAAGAATAAGAAGACATCAACAAGCGTG 2021
.|||||||.|||.|||||||.||.|||||||||||||||||..|.||.||.||.||.|||||.||.||.||.||
Sbjct 2878 CTGGCTGAGAGTGCTCGACCTAGAATGACTGTGGAAGAGCAGCTAGAGAGGATCAGGAGACACCAGCAGGCCTG 2951
Query 2022 CCTGAGGGAGAAGAAAAAAGGGTTAAATGTTATCGGTGCTTCAGACCAGTCACCCTTACAAAGCCCTTCAAATT 2095
|||||||||||||||.||.|||.|.|.|||..||||||||||.|| |||.|||.|..
Sbjct 2952 CCTGAGGGAGAAGAAGAAGGGGCTGAGTGTCCTCGGTGCTTCCGA------------------CCCGTCAGACG 3007
Query 2096 TAAGGGATAATCCATTTAGGACTACTCAGACTCGAAGGAGGGATGA------TAAGGAACTGGACACTG-CCAT 2162
|.|||||.|.||||.|.|||..|||||||||||.|||||||||||| ||||||.||.|||||.| |||
Sbjct 3008 TGAGGGACAGTCCACTCAGGCTTACTCAGACTCTAAGGAGGGATGATAACGTTAAGGAGCTAGACACCGTCCA- 3080
Query 2163 TAGAGAAAATGATGTAAAGCCAGACCATGAAACTCCTGCA--ACAGAAATTGT--TCAACTAAAAGAAACCGAA 2232
.||||||||||||||||||||||||.|.||.|||||.||| |||| ||| |||.|||.||||..|.|||
Sbjct 3081 CAGAGAAAATGATGTAAAGCCAGACTACGAGACTCCAGCAGCACAG----TGTGCTCACCTAGAAGACGCTGAA 3150
Query 2233 CCCCAAAATGTGGACTTCAGCAAAGAGTTAAAAAAAACTGAAAACATTTCATATGAAATGCTTTTTGAACCTGA 2306
|||||.||||..|||.||.|||.|.||.|||||| .||.|||||||||||....||||||
Sbjct 3151 CCCCAGAATGCAGACATCGGCAGAAAGCTAAAAA---------------GATCTGAAATGCTTTACACACCTGA 3209
Query 2307 GCCAAATGGAGTAAATTCTGTGGAAATGATGGATAAAGAAAGAAACAAAGACAAAATGCCTGAGGATGTTACAT 2380
.|||||||||.|...|||||.||||.|||.|||.||.||||||.|.|||||..|..|||.||..||||...|||
Sbjct 3210 ACCAAATGGAATGGCTTCTGAGGAAGTGACGGAGAAGGAAAGACAGAAAGAGCAGGTGCATGCCGATGGGTCAT 3283
Query 2381 TCAGCCCTCAAGATGAAAC-------ACAGACCGCAAATCATAAACCAGAAGAGCATCCTGAAGAAAATACAAA 2447
.|||||||||.||.||.|| |||||.| ||||.| ..||||..|..|||||.||| .||.|
Sbjct 3284 GCAGCCCTCAGGAAGAGACGGCCATGACAGAGC----ATCAGA---TGGAAGGCCCCCCTGAGGAA---GCAGA 3347
Query 2448 GAACAGTGTTGACGAACAGGAAGAAACTGTTATTTCTTACGAATCAACTCCTGAGGTTTCTAGAGGA-AATCAA 2520
| |||.||.|.||..|||||||||||.||..|||.|..||..||.||||||||.||.|||| ||| ||||||
Sbjct 3348 G---AGTCTTCATGAGGAGGAAGAAACTCTTGCTTCCTGTGAGCCAGCTCCTGAGATTCCTAG-GGAGAATCAA 3417
Query 2521 ACAATGGCAGTGAAAAGTCTGTCCCCATCTCCTGAGTCCT---CGGCATCGCCAGTTCCATCCACTCAGCCGCA 2591
||.| ||||||.||||||||||||.||||||||.|||| ||||| .|||.|||..||||||..||.||
Sbjct 3418 ACCA---CAGTGAGAAGTCTGTCCCCGTCTCCTGACTCCTCCACGGCA---GCAGATCCGCCCACTCCTCCACA 3485
Query 2592 GCTCACAGAAGGATCACATTTCATGTGTGTG 2622
|||||..||||||||.|||||||||||||||
Sbjct 3486 GCTCAGGGAAGGATCGCATTTCATGTGTGTG 3516
