Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12044
- Subject:
- XM_006506879.2
- Aligned Length:
- 3447
- Identities:
- 2151
- Gaps:
- 891
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGCCGACCTGAACCTGGAGTGGATCTGCTCGCTGCCGCGCTCCTGGACGTACGGGATCACTAGGGGCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGCGTCTTCTTCATCAACGAGGAGGCCAAGAGCACCACCTGGCTACACCCGGTCACCGGCGAGGCCGTGGTCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGGGCACCGGCGGCAGAGCACAGATTTGCCCACTGGCTGGGAAGAAGCATATACGTTCGAAGGTGCAAGATAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TATATAAACCACAATGAAAGGAAAGTGACCTGCAAGCATCCGGTTACAGGACAGCCATCCCAAGACAACTGTAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTTGTTGTGAATGATCAGACTGTTGCAACCATGACGTCCGAAGACAAGAAGGAACGACCCATAAGTATGATAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGAAGCTTCCAATTACAACATGGCTTCAGATTATGCAGTGCATCCCATGAGCCCTGTGGGCAGGACCTCGCGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCTCCAAAAAGGTTCATAATTTTGGGAAAAGGTCCAATTCAATTAAAAGGAACCCTAATGCACCTGTGGTCCG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCGTGGCTGGCTGTATAAGCAGGACAGCACCGGCATGAAGCTGTGGAAGAAGCGCTGGTTTGTGCTCTCTGACC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTTGCCTTTTCTATTACCGAGATGAGAAGGAGGAGGGTATTTTGGGAAGTATCCTGTTGCCTAGTTTTCAGATA 666
Query 1 ---------------------------------------------------------------ATGCGGACCTA 11
|||||||||||
Sbjct 667 GCCATGCTCACTGCTGAGGACCACATCAATCGCAAATATGCTTTTAAGGCAGCCCACCCAAACATGCGGACCTA 740
Query 12 TTATTTCTGCACTGATACAGGAAAGGAAATGGAGTTGTGGATGAAAGCCATGTTAGATGCTGCCCTAGTACAGA 85
||||||||||||.||||||||||||||.||||||.||||||||||.|||||||||||||||||.||.||.||||
Sbjct 741 TTATTTCTGCACCGATACAGGAAAGGAGATGGAGCTGTGGATGAAGGCCATGTTAGATGCTGCTCTGGTGCAGA 814
Query 86 CAGAACCTGTGAAAA------------------GAGTGGACAAGATTACATCTGAAAATGCACCAACTAAAGAA 141
||||||||||||||| |||||||||||||||||.||||.|.||||.||||.||||||
Sbjct 815 CAGAACCTGTGAAAAGAATTACCTTTAATTTCCGAGTGGACAAGATTACAACTGACAGTGCATCAACCAAAGAA 888
Query 142 ACCAATAACATTCCCAACCATAGAGTGCTAATTAAACCAGAGATCCAAAACAATCAAAAAAACAAGGAAATGAG 215
||||||||||||||||||||.|||||.||.||||.|||.|||.||||||||.||||.||.||.||||||||.||
Sbjct 889 ACCAATAACATTCCCAACCACAGAGTTCTCATTAGACCCGAGGTCCAAAACCATCAGAAGAATAAGGAAATCAG 962
Query 216 CAAAATTGAAGAAAAAAAGGCATTAGAAGCTGAAAAATATGGATTTCAGAAGGATGGTCAAGATAGACCCTTAA 289
|||||||||||||||||.|||.|||||||||||||.|||.||||||||||||||.||.|||||||||||.||||
Sbjct 963 CAAAATTGAAGAAAAAAGGGCCTTAGAAGCTGAAAGATACGGATTTCAGAAGGACGGGCAAGATAGACCATTAA 1036
Query 290 CAAAAATTAATAGTGTAAAGCTGAATTCTCTGCCATCTGAATATGAGAGTGGGTCAGCATGCCCTGCTCAGACT 363
||||||||||.|||||.|||.||||.||.||||.|||.||||||||.||.|||.|||..|||||..||||||.|
Sbjct 1037 CAAAAATTAACAGTGTGAAGTTGAACTCCCTGCTATCAGAATATGAAAGCGGGCCAGACTGCCCACCTCAGAAT 1110
Query 364 GTGCACTACAGACCAATCAACTTGAGCAGTTCAGAGAACAAAATAGTCAATGTTAGCCTGGCAGATCTTAGAGG 437
||.|||||||||||.|||||..|||..|||||.||...||||...||.|||||.|||.||||||||.|..|.||
Sbjct 1111 GTACACTACAGACCCATCAATGTGAATAGTTCTGACGGCAAAGCGGTGAATGTCAGCTTGGCAGATGTCCGGGG 1184
Query 438 TGGAAATCGCCCCAATACAGGGCCCTTATACACAGAGGCCGATCGAGTCATACAGAGAACAAATTCAATGCAGC 511
|||.|.||.|||.|||.||||||||.||..||||||||||||.||||||||.||||||||.|||||||||||.|
Sbjct 1185 TGGGAGTCACCCAAATGCAGGGCCCCTAGCCACAGAGGCCGACCGAGTCATTCAGAGAACGAATTCAATGCAAC 1258
Query 512 AGTTGGAACAGTGGATTAAAATCCAGAAGGGGAGGGGTCATGAAGAAGAAACCAGGGGAGTAATTTCTTACCAA 585
||.|.||.||||||||||||.|||||||.||..||||||.|||||||||..||||.||||||||||||||.|||
Sbjct 1259 AGCTAGAGCAGTGGATTAAAGTCCAGAAAGGACGGGGTCTTGAAGAAGAGCCCAGAGGAGTAATTTCTTATCAA 1332
Query 586 ACATTACCAAGAAATATGCCAAGTCACAGAGCCCAGATTATGGCCCGCTACCCTGAAGGTTATAGAACACTCCC 659
|||||.|||||||||||||||||.||||||||||||||..|||||||||.||||||||||||..|.||||||||
Sbjct 1333 ACATTGCCAAGAAATATGCCAAGCCACAGAGCCCAGATCCTGGCCCGCTGCCCTGAAGGTTACCGGACACTCCC 1406
Query 660 AAGAAACAGCAAGACAAGGCCTGAAAGTATCTGCAGTGTAACCCCTTCCACTCATGACAAGACATTAGGACCCG 733
.||||||||||||||.||.|||||.|||||||||||.||||||.||||...||||||.||||| |||.||.|
Sbjct 1407 GAGAAACAGCAAGACCAGACCTGAGAGTATCTGCAGCGTAACCTCTTCTGGTCATGAGAAGAC---AGGGCCGG 1477
Query 734 GAGCGGAGGAGAAACGGAGGTCCATGAGAGATGACACAATGTGGCAGCTCTACGAATGGCAGCAGCGTCAGTTT 807
||||.||.|||||.|||.|.|||||||||||||||||.|||||||||||.|||||.|||||||||||.||||||
Sbjct 1478 GAGCAGAAGAGAAGCGGCGATCCATGAGAGATGACACCATGTGGCAGCTGTACGAGTGGCAGCAGCGCCAGTTT 1551
Query 808 TATAACAAACAGAGCACCCTCCCTCGACACAGTACT--TTGAGTAGTCCCAAAACCATGGTAAATATTTCTGAC 879
||..||||.|||||||||||||||||.|||.| || .||||.|||||||||.|||||||..|..|.||||||
Sbjct 1552 TACCACAAGCAGAGCACCCTCCCTCGGCACGG--CTGCCTGAGCAGTCCCAAAGCCATGGTGCAGGTGTCTGAC 1623
Query 880 CAGACAATGCACTCTATTCCCACATCACCTTCCCACGGGTCAATAGCTGCTTATCAGGGATACTCCCCTCAACG 953
|||||.||||||||.||.|||||.|||||||||||.||||||..|||||||||.|||||.|.|||||||||.||
Sbjct 1624 CAGACGATGCACTCCATCCCCACGTCACCTTCCCATGGGTCAGCAGCTGCTTACCAGGGCTTCTCCCCTCAGCG 1697
Query 954 AACTTACAGATCGGAAGTGTCTTCACCAATTCAGAGAGGAGATGTGACAATAGACCGCAGACACAGGGCCCATC 1027
.||.|||||.||.||||||.|.||.||.||.|||||||||||||||||.|||||||||||.||||||.|.||||
Sbjct 1698 GACGTACAGGTCAGAAGTGACCTCGCCCATCCAGAGAGGAGATGTGACGATAGACCGCAGGCACAGGCCTCATC 1771
Query 1028 ACCCTAAGCATGTCTATGTGCCTGACAGAAGGTCAGTGCCAGCTGGCCTGACTTTACAGTCTGTTAGTCCCCAG 1101
|||||||||||||||||||..||||||||||||||.|||||||||||.|.|||||||||.||||||||||||||
Sbjct 1772 ACCCTAAGCATGTCTATGTAGCTGACAGAAGGTCAATGCCAGCTGGCTTAACTTTACAGGCTGTTAGTCCCCAG 1845
Query 1102 AGCCTCCAAGGGAAAAC------------------------------------------------------GCT 1121
|||||||||||.|.||| |||
Sbjct 1846 AGCCTCCAAGGCAGAACGAATGAGATTCTTTCACATCATCTCCAAAGGAACACCATATATTTGGATCATCAGCT 1919
Query 1122 GTCACAAGATGAAGGTAGAGGCACATTATACAAATACAGACCTGAAGAAGTAGATATTGATGCCAAGTTAAGCC 1195
|||||||||||||.||||||||||||||||||||||||||||||||||||.||.||||||||||||.||||||.
Sbjct 1920 GTCACAAGATGAATGTAGAGGCACATTATACAAATACAGACCTGAAGAAGCAGGTATTGATGCCAAATTAAGCA 1993
Query 1196 GATTATGTGAACAAGATAAAGTGGTGCATGCTCTGGAAGAGAAACTTCAGCAACTCCACAAGGAGAAATACACG 1269
||||.||||||||.|||||||||||.|..||.|||||.|||||.||.|||||.||.||||||||||||||||||
Sbjct 1994 GATTGTGTGAACAGGATAAAGTGGTCCGAGCGCTGGAGGAGAAGCTGCAGCAGCTGCACAAGGAGAAATACACG 2067
Query 1270 CTTGAGCAAGCTTTGCTATCAGCCAGCCAAGAGATAGAAATGCATGCAGATAACCCAGCAGCCATTCAGACAGT 1343
|||||||||||.|||||.||||||||||||||||||||.|||.||||.|||||||||||.||||||||.||.||
Sbjct 2068 CTTGAGCAAGCCTTGCTGTCAGCCAGCCAAGAGATAGAGATGAATGCTGATAACCCAGCTGCCATTCAAACTGT 2141
Query 1344 GGTGTTACAAAGGGATGATTTACAAAATGGACTGCTTAGTACGTGTCGAGAACTTTCTCGAGCCACTGCCGAAT 1417
||||||.||.||||||||..|.|||||.||||||||.||.||||||||.|||||.||.|||||||||||.||..
Sbjct 2142 GGTGTTGCAGAGGGATGACCTGCAAAACGGACTGCTGAGCACGTGTCGGGAACTCTCCCGAGCCACTGCTGAGC 2215
Query 1418 TGGAACGAGCATGGAGAGAATATGATAAGTTAGAATACGATGTAACTGTTACCAGGAACCAGATGCAAGAGCAG 1491
||||||||||.||||||||||||||.|||||.|||||.|||||.||||||||||||.||||||||||.|..|||
Sbjct 2216 TGGAACGAGCCTGGAGAGAATATGACAAGTTGGAATATGATGTGACTGTTACCAGGGACCAGATGCAGGGTCAG 2289
Query 1492 CTGGATCACCTTGGTGAAGTTCAGACGGAATCAGCAGGAATTCAGCGTGCACAGATTCAGAAAGAACTTTGGCG 1565
||.||.|.||||||.|||||.||||..||.||.|||||||||||.||.|||||||||||.||.||.||.|||.|
Sbjct 2290 CTCGACCGCCTTGGAGAAGTGCAGAGTGAGTCGGCAGGAATTCAACGGGCACAGATTCAAAAGGAGCTCTGGAG 2363
Query 1566 AATTCAGGATGTCATGGAAGGGCTGAGTAAACATAAGCAGCAAAGAGGTACTACAGAAATAGGTATGATAGGAT 1639
||||||.|||||||||||.|||.||||.|||||.||.|||||||||||..||.||||||.||||.||..|||||
Sbjct 2364 AATTCAAGATGTCATGGAGGGGTTGAGCAAACACAAACAGCAAAGAGGCTCTTCAGAAACAGGTCTGGCAGGAT 2437
Query 1640 CAAAGCCTTTCTCAACAGTTAAGTACAAAAATGAGGGTCCAGATTATAGACTCTACAAGAGTGAACCAGAGTTA 1713
||||||||||||||.|||||||||||||.|..||||||||||||||||||||||||||||||||.|||||||||
Sbjct 2438 CAAAGCCTTTCTCATCAGTTAAGTACAAGAGCGAGGGTCCAGATTATAGACTCTACAAGAGTGAGCCAGAGTTA 2511
Query 1714 ACAACAGTGGCAGAAGTTGATGAATCTAATGGAGAAGAAAAATCAGAACCTGTTTCAGAGATAGAAACTTCAGT 1787
||.||||||||||||||.|||||||||||.|||||||||||.|||||.||.|||||.||||.||||.||.||||
Sbjct 2512 ACCACAGTGGCAGAAGTCGATGAATCTAACGGAGAAGAAAAGTCAGAGCCAGTTTCTGAGACAGAAGCTCCAGT 2585
Query 1788 TGTTAAAGGTTCCCACTTTCCTGTTGGAGTAGTCCCTCCAAGAGCAAAATCACCAACACCCGAATCTTCGACAA 1861
.||||||||||||||.|||||.||.|| |||.||||..|||.||||.|||||.||||||||.||.||.||.|
Sbjct 2586 CGTTAAAGGTTCCCATTTTCCAGTCGG---AGTTCCTCTGAGAACAAAGTCACCCACACCCGAGTCCTCCACGA 2656
Query 1862 TAGCTTCCTATGTAACCTTGAGGAAAACTAAGAAGATGATGGATCTAAGAACGGAAAGACCAAGAAGTGCAGTG 1935
|||||||||||||.|||||||||||.||||||||||||.||||.||||||||||||||||||||||||||.|||
Sbjct 2657 TAGCTTCCTATGTGACCTTGAGGAAGACTAAGAAGATGGTGGAGCTAAGAACGGAAAGACCAAGAAGTGCCGTG 2730
Query 1936 GAACAGCTCTGTTTGGCTGAAAGTACTCGACCAAGGATGACTGTGGAAGAGCAAATGGAAAGAATAAGAAGACA 2009
||.|||||.|||.|||||||.|||.|||||||.||.|||||||||||||||||..|.||.||.||.||.|||||
Sbjct 2731 GAGCAGCTGTGTCTGGCTGAGAGTGCTCGACCTAGAATGACTGTGGAAGAGCAGCTAGAGAGGATCAGGAGACA 2804
Query 2010 TCAACAAGCGTGCCTGAGGGAGAAGAAAAAAGGGTTAAATGTTATCGGTGCTTCAGACCAGTCACCCTTACAAA 2083
.||.||.||.|||||||||||||||||.||.|||.|.|.|||..||||||||||.||
Sbjct 2805 CCAGCAGGCCTGCCTGAGGGAGAAGAAGAAGGGGCTGAGTGTCCTCGGTGCTTCCGA----------------- 2861
Query 2084 GCCCTTCAAATTTAAGGGATAATCCATTTAGGACTACTCAGACTCGAAGGAGGGATGA------TAAGGAACTG 2151
|||.|||.|..|.|||||.|.||||.|.|||..|||||||||||.|||||||||||| ||||||.||.
Sbjct 2862 -CCCGTCAGACGTGAGGGACAGTCCACTCAGGCTTACTCAGACTCTAAGGAGGGATGATAACGTTAAGGAGCTA 2934
Query 2152 GACACTG-CCATTAGAGAAAATGATGTAAAGCCAGACCATGAAACTCCTGCA--ACAGAAATTGT--TCAACTA 2220
|||||.| ||| .||||||||||||||||||||||||.|.||.|||||.||| |||| ||| |||.|||
Sbjct 2935 GACACCGTCCA-CAGAGAAAATGATGTAAAGCCAGACTACGAGACTCCAGCAGCACAG----TGTGCTCACCTA 3003
Query 2221 AAAGAAACCGAACCCCAAAATGTGGACTTCAGCAAAGAGTTAAAAAAAACTGAAAACATTTCATATGAAATGCT 2294
.||||..|.||||||||.||||..|||.||.|||.|.||.|||||| .||.|||||||||
Sbjct 3004 GAAGACGCTGAACCCCAGAATGCAGACATCGGCAGAAAGCTAAAAA---------------GATCTGAAATGCT 3062
Query 2295 TTTTGAACCTGAGCCAAATGGAGTAAATTCTGTGGAAATGATGGATAAAGAAAGAAACAAAGACAAAATGCCTG 2368
||....||||||.|||||||||.|...|||||.||||.|||.|||.||.||||||.|.|||||..|..|||.||
Sbjct 3063 TTACACACCTGAACCAAATGGAATGGCTTCTGAGGAAGTGACGGAGAAGGAAAGACAGAAAGAGCAGGTGCATG 3136
Query 2369 AGGATGTTACATTCAGCCCTCAAGATGAAAC-------ACAGACCGCAAATCATAAACCAGAAGAGCATCCTGA 2435
..||||...|||.|||||||||.||.||.|| |||||.| ||||.| ..||||..|..|||||
Sbjct 3137 CCGATGGGTCATGCAGCCCTCAGGAAGAGACGGCCATGACAGAGC----ATCAGA---TGGAAGGCCCCCCTGA 3203
Query 2436 AGAAAATACAAAGAACAGTGTTGACGAACAGGAAGAAACTGTTATTTCTTACGAATCAACTCCTGAGGTTTCTA 2509
.||| .||.|| |||.||.|.||..|||||||||||.||..|||.|..||..||.||||||||.||.|||
Sbjct 3204 GGAA---GCAGAG---AGTCTTCATGAGGAGGAAGAAACTCTTGCTTCCTGTGAGCCAGCTCCTGAGATTCCTA 3271
Query 2510 GAGGA-AATCAAACAATGGCAGTGAAAAGTCTGTCCCCATCTCCTGAGTCCT---CGGCATCGCCAGTTCCATC 2579
| ||| ||||||||.| ||||||.||||||||||||.||||||||.|||| ||||| .|||.|||..|
Sbjct 3272 G-GGAGAATCAAACCA---CAGTGAGAAGTCTGTCCCCGTCTCCTGACTCCTCCACGGCA---GCAGATCCGCC 3338
Query 2580 CACTCAGCCGCAGCTCACAGAAGGATCACATTTCATGTGTGTG 2622
|||||..||.|||||||..||||||||.|||||||||||||||
Sbjct 3339 CACTCCTCCACAGCTCAGGGAAGGATCGCATTTCATGTGTGTG 3381
