Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12044
- Subject:
- XM_006506881.2
- Aligned Length:
- 3378
- Identities:
- 2152
- Gaps:
- 822
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGCCGACCTGAACCTGGAGTGGATCTGCTCGCTGCCGCGCTCCTGGACGTACGGGATCACTAGGGGCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGCGTCTTCTTCATCAACGAGGAGGCCAAGAGCACCACCTGGCTACACCCGGTCACCGGCGAGGCCGTGGTCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGGGCACCGGCGGCAGAGCACAGATTTGCCCACTGGCTGGGAAGAAGCATATACGTTCGAAGGTGCAAGATAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TATATAAACCACAATGAAAGGAAAGTGACCTGCAAGCATCCGGTTACAGGACAGCCATCCCAAGACAACTGTAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTTGTTGTGAATGATCAGACTGTTGCAACCATGACGTCCGAAGACAAGAAGGAACGACCCATAAGTATGATAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGAAGCTTCCAATTACAACATGGCTTCAGATTATGCAGTGCATCCCATGAGCCCTGTGGGCAGGACCTCGCGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCTCCAAAAAGGTTCATAATTTTGGGAAAAGGTCCAATTCAATTAAAAGGAACCCTAATGCACCTGTGGTCCG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCGTGGCTGGCTGTATAAGCAGGACAGCACCGGCATGAAGCTGTGGAAGAAGCGCTGGTTTGTGCTCTCTGACC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTTGCCTTTTCTATTACCGAGATGAGAAGGAGGAGGGTATTTTGGGAAGTATCCTGTTGCCTAGTTTTCAGATA 666
Query 1 ---------------------------------------------------------------ATGCGGACCTA 11
|||||||||||
Sbjct 667 GCCATGCTCACTGCTGAGGACCACATCAATCGCAAATATGCTTTTAAGGCAGCCCACCCAAACATGCGGACCTA 740
Query 12 TTATTTCTGCACTGATACAGGAAAGGAAATGGAGTTGTGGATGAAAGCCATGTTAGATGCTGCCCTAGTACAGA 85
||||||||||||.||||||||||||||.||||||.||||||||||.|||||||||||||||||.||.||.||||
Sbjct 741 TTATTTCTGCACCGATACAGGAAAGGAGATGGAGCTGTGGATGAAGGCCATGTTAGATGCTGCTCTGGTGCAGA 814
Query 86 CAGAACCTGTGAAAAGAGTGGACAAGATTACATCTGAAAATGCACCAACTAAAGAAACCAATAACATTCCCAAC 159
||||||||||||||||||||||||||||||||.||||.|.||||.||||.||||||||||||||||||||||||
Sbjct 815 CAGAACCTGTGAAAAGAGTGGACAAGATTACAACTGACAGTGCATCAACCAAAGAAACCAATAACATTCCCAAC 888
Query 160 CATAGAGTGCTAATTAAACCAGAGATCCAAAACAATCAAAAAAACAAGGAAATGAGCAAAATTGAAGAAAAAAA 233
||.|||||.||.||||.|||.|||.||||||||.||||.||.||.||||||||.|||||||||||||||||||.
Sbjct 889 CACAGAGTTCTCATTAGACCCGAGGTCCAAAACCATCAGAAGAATAAGGAAATCAGCAAAATTGAAGAAAAAAG 962
Query 234 GGCATTAGAAGCTGAAAAATATGGATTTCAGAAGGATGGTCAAGATAGACCCTTAACAAAAATTAATAGTGTAA 307
|||.|||||||||||||.|||.||||||||||||||.||.|||||||||||.||||||||||||||.|||||.|
Sbjct 963 GGCCTTAGAAGCTGAAAGATACGGATTTCAGAAGGACGGGCAAGATAGACCATTAACAAAAATTAACAGTGTGA 1036
Query 308 AGCTGAATTCTCTGCCATCTGAATATGAGAGTGGGTCAGCATGCCCTGCTCAGACTGTGCACTACAGACCAATC 381
||.||||.||.||||.|||.||||||||.||.|||.|||..|||||..||||||.|||.|||||||||||.|||
Sbjct 1037 AGTTGAACTCCCTGCTATCAGAATATGAAAGCGGGCCAGACTGCCCACCTCAGAATGTACACTACAGACCCATC 1110
Query 382 AACTTGAGCAGTTCAGAGAACAAAATAGTCAATGTTAGCCTGGCAGATCTTAGAGGTGGAAATCGCCCCAATAC 455
||..|||..|||||.||...||||...||.|||||.|||.||||||||.|..|.|||||.|.||.|||.|||.|
Sbjct 1111 AATGTGAATAGTTCTGACGGCAAAGCGGTGAATGTCAGCTTGGCAGATGTCCGGGGTGGGAGTCACCCAAATGC 1184
Query 456 AGGGCCCTTATACACAGAGGCCGATCGAGTCATACAGAGAACAAATTCAATGCAGCAGTTGGAACAGTGGATTA 529
|||||||.||..||||||||||||.||||||||.||||||||.|||||||||||.|||.|.||.||||||||||
Sbjct 1185 AGGGCCCCTAGCCACAGAGGCCGACCGAGTCATTCAGAGAACGAATTCAATGCAACAGCTAGAGCAGTGGATTA 1258
Query 530 AAATCCAGAAGGGGAGGGGTCATGAAGAAGAAACCAGGGGAGTAATTTCTTACCAAACATTACCAAGAAATATG 603
||.|||||||.||..||||||.|||||||||..||||.||||||||||||||.||||||||.||||||||||||
Sbjct 1259 AAGTCCAGAAAGGACGGGGTCTTGAAGAAGAGCCCAGAGGAGTAATTTCTTATCAAACATTGCCAAGAAATATG 1332
Query 604 CCAAGTCACAGAGCCCAGATTATGGCCCGCTACCCTGAAGGTTATAGAACACTCCCAAGAAACAGCAAGACAAG 677
|||||.||||||||||||||..|||||||||.||||||||||||..|.||||||||.||||||||||||||.||
Sbjct 1333 CCAAGCCACAGAGCCCAGATCCTGGCCCGCTGCCCTGAAGGTTACCGGACACTCCCGAGAAACAGCAAGACCAG 1406
Query 678 GCCTGAAAGTATCTGCAGTGTAACCCCTTCCACTCATGACAAGACATTAGGACCCGGAGCGGAGGAGAAACGGA 751
.|||||.|||||||||||.||||||.||||...||||||.||||| |||.||.|||||.||.|||||.|||.
Sbjct 1407 ACCTGAGAGTATCTGCAGCGTAACCTCTTCTGGTCATGAGAAGAC---AGGGCCGGGAGCAGAAGAGAAGCGGC 1477
Query 752 GGTCCATGAGAGATGACACAATGTGGCAGCTCTACGAATGGCAGCAGCGTCAGTTTTATAACAAACAGAGCACC 825
|.|||||||||||||||||.|||||||||||.|||||.|||||||||||.||||||||..||||.|||||||||
Sbjct 1478 GATCCATGAGAGATGACACCATGTGGCAGCTGTACGAGTGGCAGCAGCGCCAGTTTTACCACAAGCAGAGCACC 1551
Query 826 CTCCCTCGACACAGTACT--TTGAGTAGTCCCAAAACCATGGTAAATATTTCTGACCAGACAATGCACTCTATT 897
||||||||.|||.| || .||||.|||||||||.|||||||..|..|.|||||||||||.||||||||.||.
Sbjct 1552 CTCCCTCGGCACGG--CTGCCTGAGCAGTCCCAAAGCCATGGTGCAGGTGTCTGACCAGACGATGCACTCCATC 1623
Query 898 CCCACATCACCTTCCCACGGGTCAATAGCTGCTTATCAGGGATACTCCCCTCAACGAACTTACAGATCGGAAGT 971
|||||.|||||||||||.||||||..|||||||||.|||||.|.|||||||||.||.||.|||||.||.|||||
Sbjct 1624 CCCACGTCACCTTCCCATGGGTCAGCAGCTGCTTACCAGGGCTTCTCCCCTCAGCGGACGTACAGGTCAGAAGT 1697
Query 972 GTCTTCACCAATTCAGAGAGGAGATGTGACAATAGACCGCAGACACAGGGCCCATCACCCTAAGCATGTCTATG 1045
|.|.||.||.||.|||||||||||||||||.|||||||||||.||||||.|.||||||||||||||||||||||
Sbjct 1698 GACCTCGCCCATCCAGAGAGGAGATGTGACGATAGACCGCAGGCACAGGCCTCATCACCCTAAGCATGTCTATG 1771
Query 1046 TGCCTGACAGAAGGTCAGTGCCAGCTGGCCTGACTTTACAGTCTGTTAGTCCCCAGAGCCTCCAAGGGAAAACG 1119
|..||||||||||||||.|||||||||||.|.|||||||||.|||||||||||||||||||||||||.|.||||
Sbjct 1772 TAGCTGACAGAAGGTCAATGCCAGCTGGCTTAACTTTACAGGCTGTTAGTCCCCAGAGCCTCCAAGGCAGAACG 1845
Query 1120 CTGTCACAAGATGAAGGTAGAGGCACATTATACAAATACAGACCTGAAGAAGTAGATATTGATGCCAAGTTAAG 1193
|||||||||||||||.||||||||||||||||||||||||||||||||||||.||.||||||||||||.|||||
Sbjct 1846 CTGTCACAAGATGAATGTAGAGGCACATTATACAAATACAGACCTGAAGAAGCAGGTATTGATGCCAAATTAAG 1919
Query 1194 CCGATTATGTGAACAAGATAAAGTGGTGCATGCTCTGGAAGAGAAACTTCAGCAACTCCACAAGGAGAAATACA 1267
|.||||.||||||||.|||||||||||.|..||.|||||.|||||.||.|||||.||.||||||||||||||||
Sbjct 1920 CAGATTGTGTGAACAGGATAAAGTGGTCCGAGCGCTGGAGGAGAAGCTGCAGCAGCTGCACAAGGAGAAATACA 1993
Query 1268 CGCTTGAGCAAGCTTTGCTATCAGCCAGCCAAGAGATAGAAATGCATGCAGATAACCCAGCAGCCATTCAGACA 1341
|||||||||||||.|||||.||||||||||||||||||||.|||.||||.|||||||||||.||||||||.||.
Sbjct 1994 CGCTTGAGCAAGCCTTGCTGTCAGCCAGCCAAGAGATAGAGATGAATGCTGATAACCCAGCTGCCATTCAAACT 2067
Query 1342 GTGGTGTTACAAAGGGATGATTTACAAAATGGACTGCTTAGTACGTGTCGAGAACTTTCTCGAGCCACTGCCGA 1415
||||||||.||.||||||||..|.|||||.||||||||.||.||||||||.|||||.||.|||||||||||.||
Sbjct 2068 GTGGTGTTGCAGAGGGATGACCTGCAAAACGGACTGCTGAGCACGTGTCGGGAACTCTCCCGAGCCACTGCTGA 2141
Query 1416 ATTGGAACGAGCATGGAGAGAATATGATAAGTTAGAATACGATGTAACTGTTACCAGGAACCAGATGCAAGAGC 1489
..||||||||||.||||||||||||||.|||||.|||||.|||||.||||||||||||.||||||||||.|..|
Sbjct 2142 GCTGGAACGAGCCTGGAGAGAATATGACAAGTTGGAATATGATGTGACTGTTACCAGGGACCAGATGCAGGGTC 2215
Query 1490 AGCTGGATCACCTTGGTGAAGTTCAGACGGAATCAGCAGGAATTCAGCGTGCACAGATTCAGAAAGAACTTTGG 1563
||||.||.|.||||||.|||||.||||..||.||.|||||||||||.||.|||||||||||.||.||.||.|||
Sbjct 2216 AGCTCGACCGCCTTGGAGAAGTGCAGAGTGAGTCGGCAGGAATTCAACGGGCACAGATTCAAAAGGAGCTCTGG 2289
Query 1564 CGAATTCAGGATGTCATGGAAGGGCTGAGTAAACATAAGCAGCAAAGAGGTACTACAGAAA---TAGGTATGAT 1634
.|||||||.|||||||||||.|||.||||.|||||.||.|||||||||||..||.|||||| |||||.||..
Sbjct 2290 AGAATTCAAGATGTCATGGAGGGGTTGAGCAAACACAAACAGCAAAGAGGCTCTTCAGAAACAGTAGGTCTGGC 2363
Query 1635 AGGATCAAAGCCTTTCTCAACAGTTAAGTACAAAAATGAGGGTCCAGATTATAGACTCTACAAGAGTGAACCAG 1708
|||||||||||||||||||.|||||||||||||.|..||||||||||||||||||||||||||||||||.||||
Sbjct 2364 AGGATCAAAGCCTTTCTCATCAGTTAAGTACAAGAGCGAGGGTCCAGATTATAGACTCTACAAGAGTGAGCCAG 2437
Query 1709 AGTTAACAACAGTGGCAGAAGTTGATGAATCTAATGGAGAAGAAAAATCAGAACCTGTTTCAGAGATAGAAACT 1782
|||||||.||||||||||||||.|||||||||||.|||||||||||.|||||.||.|||||.||||.||||.||
Sbjct 2438 AGTTAACCACAGTGGCAGAAGTCGATGAATCTAACGGAGAAGAAAAGTCAGAGCCAGTTTCTGAGACAGAAGCT 2511
Query 1783 TCAGTTGTTAAAGGTTCCCACTTTCCTGTTGGAGTAGTCCCTCCAAGAGCAAAATCACCAACACCCGAATCTTC 1856
.||||.||||||||||||||.|||||.||.|| |||.||||..|||.||||.|||||.||||||||.||.||
Sbjct 2512 CCAGTCGTTAAAGGTTCCCATTTTCCAGTCGG---AGTTCCTCTGAGAACAAAGTCACCCACACCCGAGTCCTC 2582
Query 1857 GACAATAGCTTCCTATGTAACCTTGAGGAAAACTAAGAAGATGATGGATCTAAGAACGGAAAGACCAAGAAGTG 1930
.||.||||||||||||||.|||||||||||.||||||||||||.||||.|||||||||||||||||||||||||
Sbjct 2583 CACGATAGCTTCCTATGTGACCTTGAGGAAGACTAAGAAGATGGTGGAGCTAAGAACGGAAAGACCAAGAAGTG 2656
Query 1931 CAGTGGAACAGCTCTGTTTGGCTGAAAGTACTCGACCAAGGATGACTGTGGAAGAGCAAATGGAAAGAATAAGA 2004
|.|||||.|||||.|||.|||||||.|||.|||||||.||.|||||||||||||||||..|.||.||.||.||.
Sbjct 2657 CCGTGGAGCAGCTGTGTCTGGCTGAGAGTGCTCGACCTAGAATGACTGTGGAAGAGCAGCTAGAGAGGATCAGG 2730
Query 2005 AGACATCAACAAGCGTGCCTGAGGGAGAAGAAAAAAGGGTTAAATGTTATCGGTGCTTCAGACCAGTCACCCTT 2078
|||||.||.||.||.|||||||||||||||||.||.|||.|.|.|||..||||||||||.||
Sbjct 2731 AGACACCAGCAGGCCTGCCTGAGGGAGAAGAAGAAGGGGCTGAGTGTCCTCGGTGCTTCCGA------------ 2792
Query 2079 ACAAAGCCCTTCAAATTTAAGGGATAATCCATTTAGGACTACTCAGACTCGAAGGAGGGATGA------TAAGG 2146
|||.|||.|..|.|||||.|.||||.|.|||..|||||||||||.|||||||||||| |||||
Sbjct 2793 ------CCCGTCAGACGTGAGGGACAGTCCACTCAGGCTTACTCAGACTCTAAGGAGGGATGATAACGTTAAGG 2860
Query 2147 AACTGGACACTG-CCATTAGAGAAAATGATGTAAAGCCAGACCATGAAACTCCTGCA--ACAGAAATTGT--TC 2215
|.||.|||||.| ||| .||||||||||||||||||||||||.|.||.|||||.||| |||| ||| ||
Sbjct 2861 AGCTAGACACCGTCCA-CAGAGAAAATGATGTAAAGCCAGACTACGAGACTCCAGCAGCACAG----TGTGCTC 2929
Query 2216 AACTAAAAGAAACCGAACCCCAAAATGTGGACTTCAGCAAAGAGTTAAAAAAAACTGAAAACATTTCATATGAA 2289
|.|||.||||..|.||||||||.||||..|||.||.|||.|.||.|||||| .||.||||
Sbjct 2930 ACCTAGAAGACGCTGAACCCCAGAATGCAGACATCGGCAGAAAGCTAAAAA---------------GATCTGAA 2988
Query 2290 ATGCTTTTTGAACCTGAGCCAAATGGAGTAAATTCTGTGGAAATGATGGATAAAGAAAGAAACAAAGACAAAAT 2363
|||||||....||||||.|||||||||.|...|||||.||||.|||.|||.||.||||||.|.|||||..|..|
Sbjct 2989 ATGCTTTACACACCTGAACCAAATGGAATGGCTTCTGAGGAAGTGACGGAGAAGGAAAGACAGAAAGAGCAGGT 3062
Query 2364 GCCTGAGGATGTTACATTCAGCCCTCAAGATGAAAC-------ACAGACCGCAAATCATAAACCAGAAGAGCAT 2430
||.||..||||...|||.|||||||||.||.||.|| |||||.| ||||.| ..||||..|..
Sbjct 3063 GCATGCCGATGGGTCATGCAGCCCTCAGGAAGAGACGGCCATGACAGAGC----ATCAGA---TGGAAGGCCCC 3129
Query 2431 CCTGAAGAAAATACAAAGAACAGTGTTGACGAACAGGAAGAAACTGTTATTTCTTACGAATCAACTCCTGAGGT 2504
|||||.||| .||.|| |||.||.|.||..|||||||||||.||..|||.|..||..||.||||||||.|
Sbjct 3130 CCTGAGGAA---GCAGAG---AGTCTTCATGAGGAGGAAGAAACTCTTGCTTCCTGTGAGCCAGCTCCTGAGAT 3197
Query 2505 TTCTAGAGGA-AATCAAACAATGGCAGTGAAAAGTCTGTCCCCATCTCCTGAGTCCT---CGGCATCGCCAGTT 2574
|.|||| ||| ||||||||.| ||||||.||||||||||||.||||||||.|||| ||||| .|||.|
Sbjct 3198 TCCTAG-GGAGAATCAAACCA---CAGTGAGAAGTCTGTCCCCGTCTCCTGACTCCTCCACGGCA---GCAGAT 3264
Query 2575 CCATCCACTCAGCCGCAGCTCACAGAAGGATCACATTTCATGTGTGTG 2622
||..||||||..||.|||||||..||||||||.|||||||||||||||
Sbjct 3265 CCGCCCACTCCTCCACAGCTCAGGGAAGGATCGCATTTCATGTGTGTG 3312
