Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12044
- Subject:
- XM_017019501.1
- Aligned Length:
- 3349
- Identities:
- 1147
- Gaps:
- 2192
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGCGGATCTGAACCTGGAGTGGATCTCCCTGCCCCGGTCCTGGACTTACGGGATCACCAGGGGCGGCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGTCTTCTTCATCAACGAGGAGGCCAAGAGCACCACCTGGCTGCACCCCGTCACCGGCGAGGCGGTGGTCACCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GACACCGGCGGCAGAGCACAGATTTGCCTACTGGCTGGGAAGAAGCATATACTTTTGAAGGTGCAAGATACTAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATAAACCATAATGAAAGGAAAGTGACCTGCAAACATCCAGTCACAGGACAACCATCACAGGACAATTGTATTTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGTAGTGAATGAACAGACTGTTGCAACCATGACATCTGAAGAAAAGAAGGAACGGCCAATAAGTATGATAAATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGCTTCTAACTATAACGTGACTTCAGATTATGCAGTGCATCCAATGAGCCCTGTAGGCAGAACTTCACGAGCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCAAAAAAAGTTCATAATTTTGGAAAGAGGTCAAATTCAATTAAAAGGAATCCTAATGCACCGGTTGTCAGACG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGTTGGCTTTATAAACAGGACAGTACTGGCATGAAATTGTGGAAGAAACGCTGGTTTGTGCTTTCTGACCTTT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCCTCTTTTATTATAGAGATGAGAAAGAAGAGGGTATCCTGGGAAGCATACTGTTACCTAGTTTTCAGATAGCT 666
Query 1 ------------------------------------------------------------ATGCGGACCTATTA 14
||||||||||||||
Sbjct 667 TTGCTTACCTCTGAAGATCACATTAATCGCAAATATGCTTTTAAGGCAGCCCATCCAAACATGCGGACCTATTA 740
Query 15 TTTCTGCACTGATACAGGAAAGGAAATGGAGTTGTGGATGAAAGCCATGTTAGATGCTGCCCTAGTACAGACAG 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TTTCTGCACTGATACAGGAAAGGAAATGGAGTTGTGGATGAAAGCCATGTTAGATGCTGCCCTAGTACAGACAG 814
Query 89 AACCTGTGAAAAGAGTGGACAAGATTACATCTGAAAATGCACCAACTAAAGAAACCAATAACATTCCCAACCAT 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AACCTGTGAAAAGAGTGGACAAGATTACATCTGAAAATGCACCAACTAAAGAAACCAATAACATTCCCAACCAT 888
Query 163 AGAGTGCTAATTAAACCAGAGATCCAAAACAATCAAAAAAACAAGGAAATGAGCAAAATTGAAGAAAAAAAGGC 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGAGTGCTAATTAAACCAGAGATCCAAAACAATCAAAAAAACAAGGAAATGAGCAAAATTGAAGAAAAAAAGGC 962
Query 237 ATTAGAAGCTGAAAAATATGGATTTCAGAAGGATGGTCAAGATAGACCCTTAACAAAAATTAATAGTGTAAAGC 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ATTAGAAGCTGAAAAATATGGATTTCAGAAGGATGGTCAAGATAGACCCTTAACAAAAATTAATAGTGTAAAGC 1036
Query 311 TGAATTCTCTGCCATCTGAATATGAGAGTGGGTCAGCATGCCCTGCTCAGACTGTGCACTACAGACCAATCAAC 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TGAATTCTCTGCCATCTGAATATGAGAGTGGGTCAGCATGCCCTGCTCAGACTGTGCACTACAGACCAATCAAC 1110
Query 385 TTGAGCAGTTCAGAGAACAAAATAGTCAATGTTAGCCTGGCAGATCTTAGAGGTGGAAATCGCCCCAATACAGG 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TTGAGCAGTTCAGAGAACAAAATAGTCAATGTTAGCCTGGCAGATCTTAGAGGTGGAAATCGCCCCAATACAGG 1184
Query 459 GCCCTTATACACAGAGGCCGATCGAGTCATACAGAGAACAAATTCAATGCAGCAGTTGGAACAGTGGATTAAAA 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GCCCTTATACACAGAGGCCGATCGAGTCATACAGAGAACAAATTCAATGCAGCAGTTGGAACAGTGGATTAAAA 1258
Query 533 TCCAGAAGGGGAGGGGTCATGAAGAAGAAACCAGGGGAGTAATTTCTTACCAAACATTACCAAGAAATATGCCA 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TCCAGAAGGGGAGGGGTCATGAAGAAGAAACCAGGGGAGTAATTTCTTACCAAACATTACCAAGAAATATGCCA 1332
Query 607 AGTCACAGAGCCCAGATTATGGCCCGCTACCCTGAAGGTTATAGAACACTCCCAAGAAACAGCAAGACAAGGCC 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AGTCACAGAGCCCAGATTATGGCCCGCTACCCTGAAGGTTATAGAACACTCCCAAGAAACAGCAAGACAAGGCC 1406
Query 681 TGAAAGTATCTGCAGTGTAACCCCTTCCACTCATGACAAGACATTAGGACCCGGAGCGGAGGAGAAACGGAGGT 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TGAAAGTATCTGCAGTGTAACCCCTTCCACTCATGACAAGACATTAGGACCCGGAGCGGAGGAGAAACGGAGGT 1480
Query 755 CCATGAGAGATGACACAATGTGGCAGCTCTACGAATGGCAGCAGCGTCAGTTTTATAACAAACAGAGCACCCTC 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CCATGAGAGATGACACAATGTGGCAGCTCTACGAATGGCAGCAGCGTCAGTTTTATAACAAACAGAGCACCCTC 1554
Query 829 CCTCGACACAGTACTTTGAGTAGTCCCAAAACCATGGTAAATATTTCTGACCAGACAATGCACTCTATTCCCAC 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CCTCGACACAGTACTTTGAGTAGTCCCAAAACCATGGTAAATATTTCTGACCAGACAATGCACTCTATTCCCAC 1628
Query 903 ATCACCTTCCCACGGGTCAATAGCTGCTTATCAGGGATACTCCCCTCAACGAACTTACAGATCGGAAGTGTCTT 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 ATCACCTTCCCACGGGTCAATAGCTGCTTATCAGGGATACTCCCCTCAACGAACTTACAGATCGGAAGTGTCTT 1702
Query 977 CACCAATTCAGAGAGGAGATGTGACAATAGACCGCAGACACAGGGCCCATCACCCTAAGCATGTCTATGTGCCT 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CACCAATTCAGAGAGGAGATGTGACAATAGACCGCAGACACAGGGCCCATCACCCTAAGCATGTCTATGTGCCT 1776
Query 1051 GACAGAAGGTCAGTGCCAGCTGGCCTGACTTTACAGTCTGTTAGTCCCCAGAGCCTCCAAGGGAAAACGCTGTC 1124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|.||
Sbjct 1777 GACAGAAGGTCAGTGCCAGCTGGCCTGACTTTACAGTCTGTTAGTCCCCAGAGCCTCCAAGGGAAAACGATATC 1850
Query 1125 ACAAG-ATGAAGGTAGAGGCACATTATACAAATACAGACCTGAAGAAGTAGATATTGATGCCAAGTTAAGCCGA 1197
.|.| ||..|.|||| ||||| ||..|.|| ||| |||
Sbjct 1851 -TATGCATTTATGTAG--------------------GACCT----------ATCATCAT----AGT---GCC-- 1884
Query 1198 TTATGTGAACAAGATAAAGTGGTGCATGCTCTGGAAGAGAAACTTCAGCAACTCCACAAGGAGAAATACACGCT 1271
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 1272 TGAGCAAGCTTTGCTATCAGCCAGCCAAGAGATAGAAATGCATGCAGATAACCCAGCAGCCATTCAGACAGTGG 1345
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 1346 TGTTACAAAGGGATGATTTACAAAATGGACTGCTTAGTACGTGTCGAGAACTTTCTCGAGCCACTGCCGAATTG 1419
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 1420 GAACGAGCATGGAGAGAATATGATAAGTTAGAATACGATGTAACTGTTACCAGGAACCAGATGCAAGAGCAGCT 1493
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 1494 GGATCACCTTGGTGAAGTTCAGACGGAATCAGCAGGAATTCAGCGTGCACAGATTCAGAAAGAACTTTGGCGAA 1567
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 1568 TTCAGGATGTCATGGAAGGGCTGAGTAAACATAAGCAGCAAAGAGGTACTACAGAAATAGGTATGATAGGATCA 1641
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 1642 AAGCCTTTCTCAACAGTTAAGTACAAAAATGAGGGTCCAGATTATAGACTCTACAAGAGTGAACCAGAGTTAAC 1715
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 1716 AACAGTGGCAGAAGTTGATGAATCTAATGGAGAAGAAAAATCAGAACCTGTTTCAGAGATAGAAACTTCAGTTG 1789
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 1790 TTAAAGGTTCCCACTTTCCTGTTGGAGTAGTCCCTCCAAGAGCAAAATCACCAACACCCGAATCTTCGACAATA 1863
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 1864 GCTTCCTATGTAACCTTGAGGAAAACTAAGAAGATGATGGATCTAAGAACGGAAAGACCAAGAAGTGCAGTGGA 1937
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 1938 ACAGCTCTGTTTGGCTGAAAGTACTCGACCAAGGATGACTGTGGAAGAGCAAATGGAAAGAATAAGAAGACATC 2011
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2012 AACAAGCGTGCCTGAGGGAGAAGAAAAAAGGGTTAAATGTTATCGGTGCTTCAGACCAGTCACCCTTACAAAGC 2085
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2086 CCTTCAAATTTAAGGGATAATCCATTTAGGACTACTCAGACTCGAAGGAGGGATGATAAGGAACTGGACACTGC 2159
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2160 CATTAGAGAAAATGATGTAAAGCCAGACCATGAAACTCCTGCAACAGAAATTGTTCAACTAAAAGAAACCGAAC 2233
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2234 CCCAAAATGTGGACTTCAGCAAAGAGTTAAAAAAAACTGAAAACATTTCATATGAAATGCTTTTTGAACCTGAG 2307
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2308 CCAAATGGAGTAAATTCTGTGGAAATGATGGATAAAGAAAGAAACAAAGACAAAATGCCTGAGGATGTTACATT 2381
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2382 CAGCCCTCAAGATGAAACACAGACCGCAAATCATAAACCAGAAGAGCATCCTGAAGAAAATACAAAGAACAGTG 2455
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2456 TTGACGAACAGGAAGAAACTGTTATTTCTTACGAATCAACTCCTGAGGTTTCTAGAGGAAATCAAACAATGGCA 2529
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2530 GTGAAAAGTCTGTCCCCATCTCCTGAGTCCTCGGCATCGCCAGTTCCATCCACTCAGCCGCAGCTCACAGAAGG 2603
Sbjct 1885 -------------------------------------------------------------------------- 1884
Query 2604 ATCACATTTCATGTGTGTG 2622
Sbjct 1885 ------------------- 1884
