Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12044
- Subject:
- XM_017321309.1
- Aligned Length:
- 3684
- Identities:
- 2151
- Gaps:
- 1128
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGCCGACCTGAACCTGGAGTGGATCTGCTCGCTGCCGCGCTCCTGGACGTACGGGATCACTAGGGGCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGCGTCTTCTTCATCAACGAGGAGGCCAAGAGCACCACCTGGCTACACCCGGTCACCGGCGAGGCCGTGGTCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGGGCACCGGCGGCAGAGCACAGATTTGCCCACTGGCTGGGAAGAAGCATATACGTTCGAAGGTGCAAGATAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TATATAAACCACAATGAAAGGAAAGTGACCTGCAAGCATCCGGTTACAGGACAGCCATCCCAAGACAACTGTAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTTGTTGTGAATGATCAGACTGTTGCAACCATGACGTCCGAAGACAAGAAGGAACGACCCATAAGTATGATAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGAAGCTTCCAATTACAACATGGCTTCAGATTATGCAGTGCATCCCATGAGCCCTGTGGGCAGGACCTCGCGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCTCCAAAAAGGTTCATAATTTTGGGAAAAGGTCCAATTCAATTAAAAGGAACCCTAATGCACCTGTGGTCCG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCGTGGCTGGCTGTATAAGCAGGACAGCACCGGCATGAAGCTGTGGAAGAAGCGCTGGTTTGTGCTCTCTGACC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTTGCCTTTTCTATTACCGAGATGAGAAGGAGGAGGGTATTTTGGGAAGTATCCTGTTGCCTAGTTTTCAGATA 666
Query 1 ---------------------------------------------------------------ATGCGGACCTA 11
|||||||||||
Sbjct 667 GCCATGCTCACTGCTGAGGACCACATCAATCGCAAATATGCTTTTAAGGCAGCCCACCCAAACATGCGGACCTA 740
Query 12 TTATTTCTGCACTGATACAGGAAAGGAAATGGAGTTGTGGATGAAAGCCATGTTAGATGCTGCCCTAGTACAGA 85
||||||||||||.||||||||||||||.||||||.||||||||||.|||||||||||||||||.||.||.||||
Sbjct 741 TTATTTCTGCACCGATACAGGAAAGGAGATGGAGCTGTGGATGAAGGCCATGTTAGATGCTGCTCTGGTGCAGA 814
Query 86 CAGAACCTGTGAAAA------------------GAGTGGACAAGATTACATCTGAAAATGCACCAACTAAAGAA 141
||||||||||||||| |||||||||||||||||.||||.|.||||.||||.||||||
Sbjct 815 CAGAACCTGTGAAAAGAATTACCTTTAATTTCCGAGTGGACAAGATTACAACTGACAGTGCATCAACCAAAGAA 888
Query 142 ACCAATAACATTCCCAACCATAGAGTGCTAATTAAACCAGAGATCCAAAACAATCAAAAAAACAAGGAAATGAG 215
||||||||||||||||||||.|||||.||.||||.|||.|||.||||||||.||||.||.||.||||||||.||
Sbjct 889 ACCAATAACATTCCCAACCACAGAGTTCTCATTAGACCCGAGGTCCAAAACCATCAGAAGAATAAGGAAATCAG 962
Query 216 CAAAATTGAAGAAAAAAAGGCATTAGAAGCTGAAAAATATGGATTTCAGAAGGATGGTCAAGATAGACCCTTAA 289
|||||||||||||||||.|||.|||||||||||||.|||.||||||||||||||.||.|||||||||||.||||
Sbjct 963 CAAAATTGAAGAAAAAAGGGCCTTAGAAGCTGAAAGATACGGATTTCAGAAGGACGGGCAAGATAGACCATTAA 1036
Query 290 CAAAAATTAATAGTGTAAAGCTGAATTCTCTGCCATCTGAATATGAGAGTGGGTCAGCATGCCCTGCTCAGACT 363
||||||||||.|||||.|||.||||.||.||||.|||.||||||||.||.|||.|||..|||||..||||||.|
Sbjct 1037 CAAAAATTAACAGTGTGAAGTTGAACTCCCTGCTATCAGAATATGAAAGCGGGCCAGACTGCCCACCTCAGAAT 1110
Query 364 GTGCACTACAGACCAATCAACTTGAGCAGTTCAGAGAACAAAATAGTCAATGTTAGCCTGGCAGATCTTAGAGG 437
||.|||||||||||.|||||..|||..|||||.||...||||...||.|||||.|||.||||||||.|..|.||
Sbjct 1111 GTACACTACAGACCCATCAATGTGAATAGTTCTGACGGCAAAGCGGTGAATGTCAGCTTGGCAGATGTCCGGGG 1184
Query 438 TGGAAATCGCCCCAATACAGGGCCCTTATACACAGAGGCCGATCGAGTCATACAGAGAACAAATTCAATGCAGC 511
|||.|.||.|||.|||.||||||||.||..||||||||||||.||||||||.||||||||.|||||||||||.|
Sbjct 1185 TGGGAGTCACCCAAATGCAGGGCCCCTAGCCACAGAGGCCGACCGAGTCATTCAGAGAACGAATTCAATGCAAC 1258
Query 512 AGTTGGAACAGTGGATTAAAATCCAGAAGGGGAGGGGTCATGAAGAAGAAACCAGGGGAGTAATTTCTTACCAA 585
||.|.||.||||||||||||.|||||||.||..||||||.|||||||||..||||.||||||||||||||.|||
Sbjct 1259 AGCTAGAGCAGTGGATTAAAGTCCAGAAAGGACGGGGTCTTGAAGAAGAGCCCAGAGGAGTAATTTCTTATCAA 1332
Query 586 ACATTACCAAGAAATATGCCAAGTCACAGAGCCCAGATTATGGCCCGCTACCCTGAAGGTTATAGAACACTCCC 659
|||||.|||||||||||||||||.||||||||||||||..|||||||||.||||||||||||..|.||||||||
Sbjct 1333 ACATTGCCAAGAAATATGCCAAGCCACAGAGCCCAGATCCTGGCCCGCTGCCCTGAAGGTTACCGGACACTCCC 1406
Query 660 AAGAAACAGCAAGACAAGGCCTGAAAGTATCTGCAGTGTAACCCCTTCCACTCATGACAAGACATTAGGACCCG 733
.||||||||||||||.||.|||||.|||||||||||.||||||.||||...||||||.||||| |||.||.|
Sbjct 1407 GAGAAACAGCAAGACCAGACCTGAGAGTATCTGCAGCGTAACCTCTTCTGGTCATGAGAAGAC---AGGGCCGG 1477
Query 734 GAGCGGAGGAGAAACGGAGGTCCATGAGAGATGACACAATGTGGCAGCTCTACGAATGGCAGCAGCGTCAGTTT 807
||||.||.|||||.|||.|.|||||||||||||||||.|||||||||||.|||||.|||||||||||.||||||
Sbjct 1478 GAGCAGAAGAGAAGCGGCGATCCATGAGAGATGACACCATGTGGCAGCTGTACGAGTGGCAGCAGCGCCAGTTT 1551
Query 808 TATAACAAACAGAGCACCCTCCCTCGACACAGTACT--TTGAGTAGTCCCAAAACCATGGTAAATATTTCTGAC 879
||..||||.|||||||||||||||||.|||.| || .||||.|||||||||.|||||||..|..|.||||||
Sbjct 1552 TACCACAAGCAGAGCACCCTCCCTCGGCACGG--CTGCCTGAGCAGTCCCAAAGCCATGGTGCAGGTGTCTGAC 1623
Query 880 CAGACAATGCACTCTATTCCCACATCACCTTCCCACGGGTCAATAGCTGCTTATCAGGGATACTCCCCTCAACG 953
|||||.||||||||.||.|||||.|||||||||||.||||||..|||||||||.|||||.|.|||||||||.||
Sbjct 1624 CAGACGATGCACTCCATCCCCACGTCACCTTCCCATGGGTCAGCAGCTGCTTACCAGGGCTTCTCCCCTCAGCG 1697
Query 954 AACTTACAGATCGGAAGTGTCTTCACCAATTCAGAGAGGAGATGTGACAATAGACCGCAGACACAGGGCCCATC 1027
.||.|||||.||.||||||.|.||.||.||.|||||||||||||||||.|||||||||||.||||||.|.||||
Sbjct 1698 GACGTACAGGTCAGAAGTGACCTCGCCCATCCAGAGAGGAGATGTGACGATAGACCGCAGGCACAGGCCTCATC 1771
Query 1028 ACCCTAAGCATGTCTATGTGCCTGACAGAAGGTCAGTGCCAGCTGGCCTGACTTTACAGTCTGTTAGTCCCCAG 1101
|||||||||||||||||||..||||||||||||||.|||||||||||.|.|||||||||.||||||||||||||
Sbjct 1772 ACCCTAAGCATGTCTATGTAGCTGACAGAAGGTCAATGCCAGCTGGCTTAACTTTACAGGCTGTTAGTCCCCAG 1845
Query 1102 AGCCTCCAAGGGAAAACG-------------------------------------------------------- 1119
|||||||||||.|.||||
Sbjct 1846 AGCCTCCAAGGCAGAACGCCAGAGGAGCTCACACTGCTGCTAATAAAGCTGAGACGGCAGCAGGCAGAGCTGAG 1919
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 1920 TAGTGTCCGGGAGCACACCTTAGCACAGCTCATGCAGCTGAAACTTGAGGCCCACAGCCCAAAGAATGAGATTC 1993
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 1994 TTTCACATCATCTCCAAAGGAACACCATATATTTGGATCATCAGATGAAAGAAAATGAACCTATTATCACCATG 2067
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 2068 GTTCACACAATGATTGAGAACTCGGCGCTAAGACCACAACTGTACCAACAATTCTTAAGACAGAAGAACAAGAT 2141
Query 1120 -------------CTGTCACAAGATGAAGGTAGAGGCACATTATACAAATACAGACCTGAAGAAGTAGATATTG 1180
|||||||||||||||.||||||||||||||||||||||||||||||||||||.||.|||||
Sbjct 2142 AAGTCTCTATTGTCTGTCACAAGATGAATGTAGAGGCACATTATACAAATACAGACCTGAAGAAGCAGGTATTG 2215
Query 1181 ATGCCAAGTTAAGCCGATTATGTGAACAAGATAAAGTGGTGCATGCTCTGGAAGAGAAACTTCAGCAACTCCAC 1254
|||||||.||||||.||||.||||||||.|||||||||||.|..||.|||||.|||||.||.|||||.||.|||
Sbjct 2216 ATGCCAAATTAAGCAGATTGTGTGAACAGGATAAAGTGGTCCGAGCGCTGGAGGAGAAGCTGCAGCAGCTGCAC 2289
Query 1255 AAGGAGAAATACACGCTTGAGCAAGCTTTGCTATCAGCCAGCCAAGAGATAGAAATGCATGCAGATAACCCAGC 1328
||||||||||||||||||||||||||.|||||.||||||||||||||||||||.|||.||||.|||||||||||
Sbjct 2290 AAGGAGAAATACACGCTTGAGCAAGCCTTGCTGTCAGCCAGCCAAGAGATAGAGATGAATGCTGATAACCCAGC 2363
Query 1329 AGCCATTCAGACAGTGGTGTTACAAAGGGATGATTTACAAAATGGACTGCTTAGTACGTGTCGAGAACTTTCTC 1402
.||||||||.||.||||||||.||.||||||||..|.|||||.||||||||.||.||||||||.|||||.||.|
Sbjct 2364 TGCCATTCAAACTGTGGTGTTGCAGAGGGATGACCTGCAAAACGGACTGCTGAGCACGTGTCGGGAACTCTCCC 2437
Query 1403 GAGCCACTGCCGAATTGGAACGAGCATGGAGAGAATATGATAAGTTAGAATACGATGTAACTGTTACCAGGAAC 1476
||||||||||.||..||||||||||.||||||||||||||.|||||.|||||.|||||.||||||||||||.||
Sbjct 2438 GAGCCACTGCTGAGCTGGAACGAGCCTGGAGAGAATATGACAAGTTGGAATATGATGTGACTGTTACCAGGGAC 2511
Query 1477 CAGATGCAAGAGCAGCTGGATCACCTTGGTGAAGTTCAGACGGAATCAGCAGGAATTCAGCGTGCACAGATTCA 1550
||||||||.|..|||||.||.|.||||||.|||||.||||..||.||.|||||||||||.||.|||||||||||
Sbjct 2512 CAGATGCAGGGTCAGCTCGACCGCCTTGGAGAAGTGCAGAGTGAGTCGGCAGGAATTCAACGGGCACAGATTCA 2585
Query 1551 GAAAGAACTTTGGCGAATTCAGGATGTCATGGAAGGGCTGAGTAAACATAAGCAGCAAAGAGGTACTACAGAAA 1624
.||.||.||.|||.|||||||.|||||||||||.|||.||||.|||||.||.|||||||||||..||.||||||
Sbjct 2586 AAAGGAGCTCTGGAGAATTCAAGATGTCATGGAGGGGTTGAGCAAACACAAACAGCAAAGAGGCTCTTCAGAAA 2659
Query 1625 TAGGTATGATAGGATCAAAGCCTTTCTCAACAGTTAAGTACAAAAATGAGGGTCCAGATTATAGACTCTACAAG 1698
.||||.||..|||||||||||||||||||.|||||||||||||.|..|||||||||||||||||||||||||||
Sbjct 2660 CAGGTCTGGCAGGATCAAAGCCTTTCTCATCAGTTAAGTACAAGAGCGAGGGTCCAGATTATAGACTCTACAAG 2733
Query 1699 AGTGAACCAGAGTTAACAACAGTGGCAGAAGTTGATGAATCTAATGGAGAAGAAAAATCAGAACCTGTTTCAGA 1772
|||||.|||||||||||.||||||||||||||.|||||||||||.|||||||||||.|||||.||.|||||.||
Sbjct 2734 AGTGAGCCAGAGTTAACCACAGTGGCAGAAGTCGATGAATCTAACGGAGAAGAAAAGTCAGAGCCAGTTTCTGA 2807
Query 1773 GATAGAAACTTCAGTTGTTAAAGGTTCCCACTTTCCTGTTGGAGTAGTCCCTCCAAGAGCAAAATCACCAACAC 1846
||.||||.||.||||.||||||||||||||.|||||.||.|| |||.||||..|||.||||.|||||.||||
Sbjct 2808 GACAGAAGCTCCAGTCGTTAAAGGTTCCCATTTTCCAGTCGG---AGTTCCTCTGAGAACAAAGTCACCCACAC 2878
Query 1847 CCGAATCTTCGACAATAGCTTCCTATGTAACCTTGAGGAAAACTAAGAAGATGATGGATCTAAGAACGGAAAGA 1920
||||.||.||.||.||||||||||||||.|||||||||||.||||||||||||.||||.|||||||||||||||
Sbjct 2879 CCGAGTCCTCCACGATAGCTTCCTATGTGACCTTGAGGAAGACTAAGAAGATGGTGGAGCTAAGAACGGAAAGA 2952
Query 1921 CCAAGAAGTGCAGTGGAACAGCTCTGTTTGGCTGAAAGTACTCGACCAAGGATGACTGTGGAAGAGCAAATGGA 1994
|||||||||||.|||||.|||||.|||.|||||||.|||.|||||||.||.|||||||||||||||||..|.||
Sbjct 2953 CCAAGAAGTGCCGTGGAGCAGCTGTGTCTGGCTGAGAGTGCTCGACCTAGAATGACTGTGGAAGAGCAGCTAGA 3026
Query 1995 AAGAATAAGAAGACATCAACAAGCGTGCCTGAGGGAGAAGAAAAAAGGGTTAAATGTTATCGGTGCTTCAGACC 2068
.||.||.||.|||||.||.||.||.|||||||||||||||||.||.|||.|.|.|||..||||||||||.||
Sbjct 3027 GAGGATCAGGAGACACCAGCAGGCCTGCCTGAGGGAGAAGAAGAAGGGGCTGAGTGTCCTCGGTGCTTCCGA-- 3098
Query 2069 AGTCACCCTTACAAAGCCCTTCAAATTTAAGGGATAATCCATTTAGGACTACTCAGACTCGAAGGAGGGATGA- 2141
|||.|||.|..|.|||||.|.||||.|.|||..|||||||||||.||||||||||||
Sbjct 3099 ----------------CCCGTCAGACGTGAGGGACAGTCCACTCAGGCTTACTCAGACTCTAAGGAGGGATGAT 3156
Query 2142 -----TAAGGAACTGGACACTG-CCATTAGAGAAAATGATGTAAAGCCAGACCATGAAACTCCTGCA--ACAGA 2207
||||||.||.|||||.| ||| .||||||||||||||||||||||||.|.||.|||||.||| ||||
Sbjct 3157 AACGTTAAGGAGCTAGACACCGTCCA-CAGAGAAAATGATGTAAAGCCAGACTACGAGACTCCAGCAGCACAG- 3228
Query 2208 AATTGT--TCAACTAAAAGAAACCGAACCCCAAAATGTGGACTTCAGCAAAGAGTTAAAAAAAACTGAAAACAT 2279
||| |||.|||.||||..|.||||||||.||||..|||.||.|||.|.||.||||||
Sbjct 3229 ---TGTGCTCACCTAGAAGACGCTGAACCCCAGAATGCAGACATCGGCAGAAAGCTAAAAA------------- 3286
Query 2280 TTCATATGAAATGCTTTTTGAACCTGAGCCAAATGGAGTAAATTCTGTGGAAATGATGGATAAAGAAAGAAACA 2353
.||.|||||||||||....||||||.|||||||||.|...|||||.||||.|||.|||.||.||||||.|.|
Sbjct 3287 --GATCTGAAATGCTTTACACACCTGAACCAAATGGAATGGCTTCTGAGGAAGTGACGGAGAAGGAAAGACAGA 3358
Query 2354 AAGACAAAATGCCTGAGGATGTTACATTCAGCCCTCAAGATGAAAC-------ACAGACCGCAAATCATAAACC 2420
||||..|..|||.||..||||...|||.|||||||||.||.||.|| |||||.| ||||.| .
Sbjct 3359 AAGAGCAGGTGCATGCCGATGGGTCATGCAGCCCTCAGGAAGAGACGGCCATGACAGAGC----ATCAGA---T 3425
Query 2421 AGAAGAGCATCCTGAAGAAAATACAAAGAACAGTGTTGACGAACAGGAAGAAACTGTTATTTCTTACGAATCAA 2494
.||||..|..|||||.||| .||.|| |||.||.|.||..|||||||||||.||..|||.|..||..||.
Sbjct 3426 GGAAGGCCCCCCTGAGGAA---GCAGAG---AGTCTTCATGAGGAGGAAGAAACTCTTGCTTCCTGTGAGCCAG 3493
Query 2495 CTCCTGAGGTTTCTAGAGGA-AATCAAACAATGGCAGTGAAAAGTCTGTCCCCATCTCCTGAGTCCT---CGGC 2564
||||||||.||.|||| ||| ||||||||.| ||||||.||||||||||||.||||||||.|||| ||||
Sbjct 3494 CTCCTGAGATTCCTAG-GGAGAATCAAACCA---CAGTGAGAAGTCTGTCCCCGTCTCCTGACTCCTCCACGGC 3563
Query 2565 ATCGCCAGTTCCATCCACTCAGCCGCAGCTCACAGAAGGATCACATTTCATGTGTGTG 2622
| .|||.|||..||||||..||.|||||||..||||||||.|||||||||||||||
Sbjct 3564 A---GCAGATCCGCCCACTCCTCCACAGCTCAGGGAAGGATCGCATTTCATGTGTGTG 3618
