Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12046
- Subject:
- NM_033324.2
- Aligned Length:
- 2320
- Identities:
- 1311
- Gaps:
- 851
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGACATATGAGAGTCCCTCTCCTCTCCCGCGTGAGCCCGCAGGAGAAGCGATGATGGAGAACCGAGCTTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCCTTCCAAGTGCTGCCCCATGAACAGTCTCCACCACCTCCCCTGCAAACGTCCAGTGATGCAGAGGTAATGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACGTTGGCTCTGGTGGTGATGGACAGTCCGAACCTCCTGCCGACGACCCATTCAACTTCTACGGAGCTTCTCTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTCTCCAAAGGATCCTTCTCTAAGGGCCGCCTCCTCATAGACCCGAACTGTAGTGGCCACAGCCCGCGCACTGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCGGCACGCACCTGCGGTCCGGAAGTTCTCCCCTGACCTTAAGTTGCTTAAGGATGTAAAGATTAGCGTGAGCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTACTGAGAGCTGCAGGAGTAAGGACAGGAAGGTGCTGTACACAGGAGTAGAACGCAGCACTCGGCCTGAGTGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGCCAGCTCCTTAGTCCTGTCAGTGGGGACGTGCATGCTTGTCCCTTTGGCGGGAGTGTTGGTAATGGGGTAGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCTAGGGGGTGAGAGTGCAGATAAGAAGGATGAGGAAAATGAGCTGGATCAGGAAAAGAGAGTGGAGTATGCAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGCTCGATGAGTTAGAAGATTTTACTGACAATTTGGAGCTAGATGAAGAAGGAACAGGCGGGTTCACGGCTAAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCAATCGTTCAAAGAGACAGAGTGGATGAAGAGGCCTTGAATTTCTCCTATGAGGATGACTTTGACAATGATGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGACGCTTTACTAGAAGAAGGTCTCTGTGCTCCCAAGAAGAGGCGAATGGAGGAAAAATATGGCGGAGACAGTG 814
Query 1 -----------------------------------ATGATGACCAAGATTAAAACAGTGCTCAAAAGTCGTGGC 39
|||||||||||||||||||||||||||||||||||||||
Sbjct 815 ATCATCCATCTGATGGAGAGACAAGTGTACAGCCAATGATGACCAAGATTAAAACAGTGCTCAAAAGTCGTGGC 888
Query 40 CGCCCACCTACAGAGCCGCTGCCCGACGGGTGGATCATGACATTCCATAACTCTGGAGTCCCGGTGTACCTACA 113
||.||||||||||||||..||||.||.||.|||||||||||.||.|||||.|||||||||||.||.|||||.||
Sbjct 889 CGTCCACCTACAGAGCCATTGCCTGATGGATGGATCATGACTTTTCATAATTCTGGAGTCCCTGTATACCTGCA 962
Query 114 CAGAGAGTCTCGGGTGGTCACCTGGTCCAGGCCATACTTCTTGGGAACGGGAAGCATACGGAAACACGACCCTC 187
||||||||||||.||||||||.||||||||.||.||||||||||||||.|||||||||||||||||.||.||||
Sbjct 963 CAGAGAGTCTCGAGTGGTCACTTGGTCCAGACCCTACTTCTTGGGAACAGGAAGCATACGGAAACATGATCCTC 1036
Query 188 CTCTGAGTAGCATCCCTTGTCTGCATTATAAGAAAATGAAGGACAACGAGGAACGGGAGCAAAGCAGTGACCTC 261
||||.||.||.|||||.||.||.|||||||||||||||||||||||.||||||||.||.||||.|.||||.||.
Sbjct 1037 CTCTAAGCAGTATCCCCTGCCTACATTATAAGAAAATGAAGGACAATGAGGAACGAGAACAAAACTGTGATCTT 1110
Query 262 ACCCCTAGTGGGGATGTGTCCCCCGTCAAGCCCCTGAGCCGATCTGCAGAGCTGGAGTTTCCC-CTGGATGAGC 334
.||||.|||||.||.|||||.||.|||||||||.||.|.||.|||||||||.|||| |||||| |||||.||||
Sbjct 1111 GCCCCCAGTGGAGAGGTGTCACCTGTCAAGCCCTTGGGTCGGTCTGCAGAGTTGGA-TTTCCCTCTGGAAGAGC 1183
Query 335 CTGACTCTATGGGTGCTGACCCGGGGCCCCCGGACGAGAAAGACCCACTAGGGGCTGAGGCAGCCCCTGGGGCC 408
|||||||.|||||||..|||.|.|||.||..|||.|||||.||||||.|.|||||||||||||||.||||.|||
Sbjct 1184 CTGACTCCATGGGTGGAGACTCAGGGTCCATGGATGAGAAGGACCCATTGGGGGCTGAGGCAGCCGCTGGAGCC 1257
Query 409 CTGGGGCAGGTGAAGGCCAAAGTCGAGGTGTGCAAAGATGAATCCGTTGATCTCGAGGAATTTCGAAGCTACCT 482
|||||.||.||||||||.|||||.||||||||||||||||||||.||||||||.|||||||||||.|..|||||
Sbjct 1258 CTGGGACAAGTGAAGGCTAAAGTTGAGGTGTGCAAAGATGAATCAGTTGATCTGGAGGAATTTCGTAATTACCT 1331
Query 483 GGAGAAGCGTTTTGACTTTGAGCAAGTTACTGTGAAAAAATTCAGGACTTGGGCTGAGCGGCGGCAATTCAATC 556
.||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||.||.|||||.|
Sbjct 1332 TGAGAAGCGTTTTGACTTTGAACAAGTAACTGTGAAAAAATTCAGGACTTGGGCTGAGCGGCGTCAGTTCAACC 1405
Query 557 GGGAAATGAAGCGGAAGCAGGCGGAGTCCGAGAGGCCCATCTTGCCAGCCAATCAGAAGCTCATTACTTTATCA 630
|.||.|||||||||||||||||.|||||.||||||||||||.||||||||||.||||||||.||.|||.||||.
Sbjct 1406 GTGAGATGAAGCGGAAGCAGGCCGAGTCAGAGAGGCCCATCCTGCCAGCCAACCAGAAGCTGATCACTCTATCT 1479
Query 631 GTGCAAGATGCACCCACAAAGAAAGAGTTTGTTATTAACCCCAACGGGAAATCCGAGGTCTGCATCCTGCACGA 704
||.|||||||||||||||||||||||||||||.||.||.|||||.|||||.||.|||||.||||||||||||||
Sbjct 1480 GTACAAGATGCACCCACAAAGAAAGAGTTTGTCATCAATCCCAATGGGAAGTCTGAGGTTTGCATCCTGCACGA 1553
Query 705 GTACATGCAGCGTGTCCTCAAGGTCCGCCCTGTCTATAATTTCTTTGAATGTGAGAACCCAAGTGAGCCTTTTG 778
.||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.||||||||||||||||
Sbjct 1554 ATACATGCAGCGTGTCCTCAAGGTCCGCCCTGTTTATAATTTCTTTGAATGTGAGAATCCAAGTGAGCCTTTTG 1627
Query 779 GTGCCTCGGTGACCATTGATGGTGTGACTTACGGATCTGGAACTGCAAGCAGCAAAAAACTTGCGAAGAATAAA 852
|||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1628 GTGCCTCCGTGACCATTGATGGTGTGACTTACGGATCTGGAACTGCAAGCAGCAAAAAACTTGCGAAGAATAAA 1701
Query 853 GCTGCCCGAGCTACACTGGAAATCCTCATCCCTGACTTTGTTAAACAGACCTCTGAAGAGAAGCCCAAAGACAG 926
|||||||||||.||.||||||||.||||||||||||||||||||||||||||||||.||||||||.||||||||
Sbjct 1702 GCTGCCCGAGCCACCCTGGAAATTCTCATCCCTGACTTTGTTAAACAGACCTCTGAGGAGAAGCCTAAAGACAG 1775
Query 927 TGAAGAACTCGAGTATTTTAACCACATCAGCATCGAGGACTCGCGGGTCTACGAGCTGACCAGCAAGGCTGGGC 1000
|||||||||.||||||||||||||||||||.||.|||||.||.||.|||||.||||||||.|||||||||||||
Sbjct 1776 TGAAGAACTGGAGTATTTTAACCACATCAGTATTGAGGATTCACGAGTCTATGAGCTGACAAGCAAGGCTGGGC 1849
Query 1001 TGTTGTCTCCATATCAGATCCTCCACGAGTGCCTTAAAAGAAACCATGGGATGGGTGACACGTCTATCAAGTTT 1074
|||||||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||.||.|||||||||
Sbjct 1850 TGTTGTCTCCATATCAGATCCTCCATGAGTGCCTTAAAAGAAACCATGGAATGGGTGACACATCCATCAAGTTT 1923
Query 1075 GAAGTGGTTCCTGGGAAAAACCAGAAGAGTGAATACGTCATGGCGTGTGGCAAGCACACAGTGCGCGGGTGGTG 1148
|||||||||||||||||||||||||||||||||||.||.|||||.||.|||||.||||||||||||||||||||
Sbjct 1924 GAAGTGGTTCCTGGGAAAAACCAGAAGAGTGAATATGTTATGGCATGCGGCAAACACACAGTGCGCGGGTGGTG 1997
Query 1149 TAAGAACAAGAGAGTTGGAAAGCAGTTAGCCTCACAGAAGATCCTTCAGCTGCTGCACCCACATGTCAAGAACT 1222
||||||.||..|||||||.||.||.|||||.||.|||||.|||||||||||.||||||||||||||||||||||
Sbjct 1998 TAAGAATAAACGAGTTGGGAAACAATTAGCATCTCAGAAAATCCTTCAGCTACTGCACCCACATGTCAAGAACT 2071
Query 1223 GGGGGTCTTTACTGCGCATGTATGGCCGTGAGAGCAGCAAGATGGTCAAGCAGGAGACATCGGACAAGAGTGTG 1296
||||.||.|||||.|||||||||||.||||||||||||||.|||||||||||||||||.||.||||||||||||
Sbjct 2072 GGGGTTCCTTACTACGCATGTATGGTCGTGAGAGCAGCAAAATGGTCAAGCAGGAGACCTCTGACAAGAGTGTG 2145
Query 1297 ATTGAGCTGCAGCAGTATGCCAAGAAGAACAAGCCCAACCTGCACATCCTCAGCAAGCTCCAAGAGGAGATGAA 1370
||.|||||.||||||||||||||||||||||.|||||||||.||||||||.||||||||.|||||.||||||||
Sbjct 2146 ATAGAGCTACAGCAGTATGCCAAGAAGAACAGGCCCAACCTTCACATCCTGAGCAAGCTACAAGAAGAGATGAA 2219
Query 1371 GAGGCTAGCTGAGGAAAGGGAGGAGACTCGAAAGAAGCCCAAGATGTCCATTGTGGCGTCCGCCCAGCCTGGCG 1444
||||||.||||..||..|||||||||||||.|||||.|||||||||||.|||||.||.||.|||||||||||.|
Sbjct 2220 GAGGCTGGCTGCAGAGCGGGAGGAGACTCGGAAGAAACCCAAGATGTCAATTGTAGCATCTGCCCAGCCTGGTG 2293
Query 1445 GTGAGCCCCTGTGCACCGTGGACGTG 1470
||||||||.|||||||.||.||.||.
Sbjct 2294 GTGAGCCCTTGTGCACAGTCGATGTA 2319
