Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12046
- Subject:
- XM_017317176.1
- Aligned Length:
- 2383
- Identities:
- 1311
- Gaps:
- 914
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGACATATGAGAGTCCCTCTCCTCTCCCGCGTGAGCCCGCAGGAGAAGCGATGATGGAGAACCGAGCTTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCCTTCCAAGTGCTGCCCCATGAACAGTCTCCACCACCTCCCCTGCAAACGTCCAGTGATGCAGAGGTAATGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACGTTGGCTCTGGTGGTGATGGACAGTCCGAACCTCCTGCCGACGACCCATTCAACTTCTACGGAGCTTCTCTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTCTCCAAAGGATCCTTCTCTAAGGGCCGCCTCCTCATAGACCCGAACTGTAGTGGCCACAGCCCGCGCACTGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCGGCACGCACCTGCGGTCCGGAAGTTCTCCCCTGACCTTAAGTTGCTTAAGGATGTAAAGATTAGCGTGAGCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTACTGAGAGCTGCAGGAGTAAGGACAGGAAGGTGCTGTACACAGGAGTAGAACGCAGCACTCGGCCTGAGTGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGCCAGCTCCTTAGTCCTGTCAGTGGGGACGTGCATGCTTGTCCCTTTGGCGGGAGTGTTGGTAATGGGGTAGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCTAGGGGGTGAGAGTGCAGATAAGAAGGATGAGGAAAATGAGCTGGATCAGGAAAAGAGAGTGGAGTATGCAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGCTCGATGAGTTAGAAGATTTTACTGACAATTTGGAGCTAGATGAAGAAGGAACAGGCGGGTTCACGGCTAAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCAATCGTTCAAAGAGACAGAGTGGATGAAGAGGCCTTGAATTTCTCCTATGAGGATGACTTTGACAATGATGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGACGCTTTACTAGAAGAAGGTCTCTGTGCTCCCAAGAAGAGGCGAATGGAGGAAAAATATGGCGGAGACAGTG 814
Query 1 -----------------------------------ATGATGACCAAGATTAAAACAGTGCTCAAAAGTCGTGGC 39
|||||||||||||||||||||||||||||||||||||||
Sbjct 815 ATCATCCATCTGATGGAGAGACAAGTGTACAGCCAATGATGACCAAGATTAAAACAGTGCTCAAAAGTCGTGGC 888
Query 40 CGCCCACCTACAGAGCCGCTGCCCGACGGGTGGATCATGACATTCCATAACTCTGGAGTCCCGGTGTACCTACA 113
||.||||||||||||||..||||.||.||.|||||||||||.||.|||||.|||||||||||.||.|||||.||
Sbjct 889 CGTCCACCTACAGAGCCATTGCCTGATGGATGGATCATGACTTTTCATAATTCTGGAGTCCCTGTATACCTGCA 962
Query 114 CAGAGAGTCTCGGGTGGTCACCTGGTCCAGGCCATACTTCTTGGGAACGGGAAGCATACGGAAACACGACCCTC 187
||||||||||||.||||||||.||||||||.||.||||||||||||||.|||||||||||||||||.||.||||
Sbjct 963 CAGAGAGTCTCGAGTGGTCACTTGGTCCAGACCCTACTTCTTGGGAACAGGAAGCATACGGAAACATGATCCTC 1036
Query 188 CTCTGAGTAGCATCCCTTGTCTGCATTATAAGAAAATGAAGGACAACGAGGAACGGGAGCAAAGCAGTGACCTC 261
||||.||.||.|||||.||.||.|||||||||||||||||||||||.||||||||.||.||||.|.||||.||.
Sbjct 1037 CTCTAAGCAGTATCCCCTGCCTACATTATAAGAAAATGAAGGACAATGAGGAACGAGAACAAAACTGTGATCTT 1110
Query 262 ACCCCTAGTGGGGATGTGTCCCCCGTCAAGCCCCTGAGCCGATCTGCAGAGCTGGAGTTTCCC-CTGGATGAGC 334
.||||.|||||.||.|||||.||.|||||||||.||.|.||.|||||||||.|||| |||||| |||||.||||
Sbjct 1111 GCCCCCAGTGGAGAGGTGTCACCTGTCAAGCCCTTGGGTCGGTCTGCAGAGTTGGA-TTTCCCTCTGGAAGAGC 1183
Query 335 CTGACTCTATGGGTGCTGACCCGGGGCCCCCGGACGAGAAAGACCCACTAGGGGCTGAGGCAGCCCCTGGGGCC 408
|||||||.|||||||..|||.|.|||.||..|||.|||||.||||||.|.|||||||||||||||.||||.|||
Sbjct 1184 CTGACTCCATGGGTGGAGACTCAGGGTCCATGGATGAGAAGGACCCATTGGGGGCTGAGGCAGCCGCTGGAGCC 1257
Query 409 CTGGGGCAGGTGAAGGCCAAAGTCGAGGTGTGCAAAGATGAATCCGTTGATCTCGAGGAATTTCGAAGCTACCT 482
|||||.||.||||||||.|||||.||||||||||||||||||||.||||||||.|||||||||||.|..|||||
Sbjct 1258 CTGGGACAAGTGAAGGCTAAAGTTGAGGTGTGCAAAGATGAATCAGTTGATCTGGAGGAATTTCGTAATTACCT 1331
Query 483 GGAGAAGCGTTTTGACTTTGAGCAAGTTACTGTGAAAAAATTCAGGACTTGGGCTGAGCGGCGGCAATTCAATC 556
.||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||.||.|||||.|
Sbjct 1332 TGAGAAGCGTTTTGACTTTGAACAAGTAACTGTGAAAAAATTCAGGACTTGGGCTGAGCGGCGTCAGTTCAACC 1405
Query 557 GGGAAATGAAGCGGAAGCAGGCGGAGTCCGAGAGGCCCATCTTGCCAGCCAATCAGAAGCTCATTACTTTATCA 630
|.||.|||||||||||||||||.|||||.||||||||||||.||||||||||.||||||||.||.|||.||||.
Sbjct 1406 GTGAGATGAAGCGGAAGCAGGCCGAGTCAGAGAGGCCCATCCTGCCAGCCAACCAGAAGCTGATCACTCTATCT 1479
Query 631 GTGCAAGATGCACCCACAAAGAAAGAGTTTGTTATTAACCCCAACGGGAAATCCGAGGTCTGCATCCTGCACGA 704
||.|||||||||||||||||||||||||||||.||.||.|||||.|||||.||.|||||.||||||||||||||
Sbjct 1480 GTACAAGATGCACCCACAAAGAAAGAGTTTGTCATCAATCCCAATGGGAAGTCTGAGGTTTGCATCCTGCACGA 1553
Query 705 GTACATGCAGCGTGTCCTCAAGGTCCGCCCTGTCTATAATTTCTTTGAATGTGAGAACCCAAGTGAGCCTTTTG 778
.||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.||||||||||||||||
Sbjct 1554 ATACATGCAGCGTGTCCTCAAGGTCCGCCCTGTTTATAATTTCTTTGAATGTGAGAATCCAAGTGAGCCTTTTG 1627
Query 779 GTGCCTCGGTGACCATTGATGGTGTGACTTACGGATCTGGAACTGCAAGCAGCAAAAAACTTGCGAAGAATAAA 852
|||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1628 GTGCCTCCGTGACCATTGATGGTGTGACTTACGGATCTGGAACTGCAAGCAGCAAAAAACTTGCGAAGAATAAA 1701
Query 853 GCTGCCCGAGCTACACTGGAAATCCTCATCCCTGACTTTGTTAAACAGACCTCTGAAGAGAAGCCCAAAGACAG 926
|||||||||||.||.||||||||.||||||||||||||||||||||||||||||||.||||||||.||||||||
Sbjct 1702 GCTGCCCGAGCCACCCTGGAAATTCTCATCCCTGACTTTGTTAAACAGACCTCTGAGGAGAAGCCTAAAGACAG 1775
Query 927 TGAAGAACTCGAG------------------------------------------------------------- 939
|||||||||.|||
Sbjct 1776 TGAAGAACTGGAGATTCTCTTCTGCTTTCAAGAAGCTCTGTTTGGCCTTCAGTTGGATGAGTCTACAAACAGAT 1849
Query 940 --TATTTTAACCACATCAGCATCGAGGACTCGCGGGTCTACGAGCTGACCAGCAAGGCTGGGCTGTTGTCTCCA 1011
|||||||||||||||||.||.|||||.||.||.|||||.||||||||.||||||||||||||||||||||||
Sbjct 1850 GCTATTTTAACCACATCAGTATTGAGGATTCACGAGTCTATGAGCTGACAAGCAAGGCTGGGCTGTTGTCTCCA 1923
Query 1012 TATCAGATCCTCCACGAGTGCCTTAAAAGAAACCATGGGATGGGTGACACGTCTATCAAGTTTGAAGTGGTTCC 1085
||||||||||||||.|||||||||||||||||||||||.|||||||||||.||.||||||||||||||||||||
Sbjct 1924 TATCAGATCCTCCATGAGTGCCTTAAAAGAAACCATGGAATGGGTGACACATCCATCAAGTTTGAAGTGGTTCC 1997
Query 1086 TGGGAAAAACCAGAAGAGTGAATACGTCATGGCGTGTGGCAAGCACACAGTGCGCGGGTGGTGTAAGAACAAGA 1159
||||||||||||||||||||||||.||.|||||.||.|||||.||||||||||||||||||||||||||.||..
Sbjct 1998 TGGGAAAAACCAGAAGAGTGAATATGTTATGGCATGCGGCAAACACACAGTGCGCGGGTGGTGTAAGAATAAAC 2071
Query 1160 GAGTTGGAAAGCAGTTAGCCTCACAGAAGATCCTTCAGCTGCTGCACCCACATGTCAAGAACTGGGGGTCTTTA 1233
|||||||.||.||.|||||.||.|||||.|||||||||||.||||||||||||||||||||||||||.||.|||
Sbjct 2072 GAGTTGGGAAACAATTAGCATCTCAGAAAATCCTTCAGCTACTGCACCCACATGTCAAGAACTGGGGTTCCTTA 2145
Query 1234 CTGCGCATGTATGGCCGTGAGAGCAGCAAGATGGTCAAGCAGGAGACATCGGACAAGAGTGTGATTGAGCTGCA 1307
||.|||||||||||.||||||||||||||.|||||||||||||||||.||.||||||||||||||.|||||.||
Sbjct 2146 CTACGCATGTATGGTCGTGAGAGCAGCAAAATGGTCAAGCAGGAGACCTCTGACAAGAGTGTGATAGAGCTACA 2219
Query 1308 GCAGTATGCCAAGAAGAACAAGCCCAACCTGCACATCCTCAGCAAGCTCCAAGAGGAGATGAAGAGGCTAGCTG 1381
||||||||||||||||||||.|||||||||.||||||||.||||||||.|||||.||||||||||||||.||||
Sbjct 2220 GCAGTATGCCAAGAAGAACAGGCCCAACCTTCACATCCTGAGCAAGCTACAAGAAGAGATGAAGAGGCTGGCTG 2293
Query 1382 AGGAAAGGGAGGAGACTCGAAAGAAGCCCAAGATGTCCATTGTGGCGTCCGCCCAGCCTGGCGGTGAGCCCCTG 1455
..||..|||||||||||||.|||||.|||||||||||.|||||.||.||.|||||||||||.|||||||||.||
Sbjct 2294 CAGAGCGGGAGGAGACTCGGAAGAAACCCAAGATGTCAATTGTAGCATCTGCCCAGCCTGGTGGTGAGCCCTTG 2367
Query 1456 TGCACCGTGGACGTG 1470
|||||.||.||.||.
Sbjct 2368 TGCACAGTCGATGTA 2382
