Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12059
- Subject:
- XR_001744819.1
- Aligned Length:
- 2088
- Identities:
- 290
- Gaps:
- 1794
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGCGGGTGCTGCTAGCGGAGGCGCCATATTGGAGGGGACAAAACTCCGGCGACAGCGAGTGACACAAATAAAC 74
Query 1 --------------------------------------ATGTTGTACCTAGAAGACTATCTGGAAATGATTGAG 36
||||||||||||||||||||||||||||||||||||
Sbjct 75 CCCTGGACCCCCTTGTTCCCTCAGCTCTAAGGGCCGCGATGTTGTACCTAGAAGACTATCTGGAAATGATTGAG 148
Query 37 CAGCTTCCTATGGATCTGCGGGACCGCTTCACGGAAATGCGCGAGATGGACCTGCAGGTGCAGAATGCAATGGA 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CAGCTTCCTATGGATCTGCGGGACCGCTTCACGGAAATGCGCGAGATGGACCTGCAGGTGCAGAATGCAATGGA 222
Query 111 TCAACTAGAACAAAGAGTCAGTGAATTCTTTATGAATGCAAAGAAAAATAAACCTGAGTGGAGGGAAGAGCAAA 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TCAACTAGAACAAAGAGTCAGTGAATTCTTTATGAATGCAAAGAAAAATAAACCTGAGTGGAGGGAAGAGCAAA 296
Query 185 TGGCATCCATCAAAAAAGACTACTATAAAGCTTTGGAAGATGCAGATGAGAAGGTTCAGTTGGCAAACCAGATA 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGGCATCCATCAAAAAAGACTACTATAAAGCTTTGGAAGATGCAGATGAGAAGGTTCAGTTGGCAAACCAGATA 370
Query 259 TATGACTTG-------GTAAGTAAA---------------AGT----AAT----GTG--------CATACTGTG 294
||||||||| |.||.||.| ||| ||| .|| ||||||
Sbjct 371 TATGACTTGGATCTTTGGAATTAGACACTCCTTCACAGCCAGTGAACAATCACCATGCTCATTCACATACT--- 441
Query 295 CCA----------------------------------------------------------------------- 297
|||
Sbjct 442 CCAGTGGAAAAAAGGAAATATAATCCAACTTCTCACCATACGACAACAGATCATATTCCTGAAAAGAAATTTAA 515
Query 298 -------------------------------------------------------------------------- 297
Sbjct 516 ATCTGAAGCTCTTCTATCCACCCTTACGTCAGATGCCTCTAAGGAAAATACACTAGGTTGTCGAAATAATAATT 589
Query 298 -------------------------------------------------------------------------- 297
Sbjct 590 CCACAGCCTCTTCTAACAATGCCTACAATGTGAATTCCTCCCAACCTCTGGGATCCTATAACATTGGCTCGTTA 663
Query 298 -------------------------------------------------------------------------- 297
Sbjct 664 TCTTCAGGAACTGGTGCAGGGGCAATTACCATGGCAGCTGCTCAAGCAGTTCAGGCTACAGCTCAGATGAAGGA 737
Query 298 -------------------------------------------------------------------------- 297
Sbjct 738 GGGACGAAGAACATCAAGTTTAAAAGCCAGTTATGAAGCATTTAAGAATAATGACTTTCAGTTGGGAAAAGAAT 811
Query 298 -------------------------------------------------------------------------- 297
Sbjct 812 TTTCAATGGCCAGGGAAACAGTTGGCTATTCATCATCTTCGGCACTTATGACAACATTAACACAGAATGCCAGT 885
Query 298 -------------------------------------------------------------------------- 297
Sbjct 886 TCATCAGCAGCCGACTCACGGAGTGGTCGAAAGAGCAAAAACAACAACAAGTCTTCAAGCCAGCAGTCATCATC 959
Query 298 -------------------------------------------------------------------------- 297
Sbjct 960 TTCCTCCTCCTCTTCTTCCTTATCATCGTGTTCTTCATCATCAACTGTTGTACAAGAAATCTCTCAACAAACAA 1033
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1034 CTGTAGTGCCAGAATCTGATTCAAATAGTCAGGTTGATTGGACTTACGACCCAAATGAACCTCGATACTGCATT 1107
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1108 TGTAATCAGGTATCTTATGGTGAGATGGTGGGATGTGATAACCAAGATTGCCCTATAGAATGGTTCCATTATGG 1181
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1182 CTGCGTTGGATTGACAGAGGCACCAAAAGGCAAATGGTACTGTCCACAGTGCACTGCTGCAATGAAGAGAAGAG 1255
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1256 GCAGCAGACACAAATAAAGGTGGTCCTTTTGTTTGATGAAGAAATAAACTTCAGCTGAAGATTTTATATAGGAC 1329
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1330 TTTAAAAAGAAGAGAAGAGAAAGAAGAAACAATGCATTTCCAGGCAACCACTTAAAGGATTTACATAGACAATC 1403
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1404 CTATAAGATCTTGAACTTGAATTTTATGGGTTGTATTTTAATAATGTAAGTAAATTATTTATGCACTCCTGGTG 1477
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1478 TGCTATGAATATTATTCCAGTTAGCCTTGGATTATTTCAGTGGCCAACATATGCAGACATTTGTACTCCTCAAC 1551
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1552 CATTTTCTCAAAGTAATGGGCATTCTATGATTTAGACTTCAAGGAATTCCAATGATGAAGATTTTAAGGAAAGT 1625
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1626 ATTTTATATTCAACAGGTATATTCTGCTGCATGTACTGTACTCCAGAGCTGTTATGTAACACTGTATATAAATG 1699
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1700 GTTGCAAAAAAAAAAAAAAGTCAGTGCTTCTAAAAAGAATTTAAGATAATGGTTTTTAAAATGCCTTTATAATA 1773
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1774 AGCTTTGTTTCTTTGTGAAACTAATTCAGCAGGCTGAAGGAAATGGTTCATGTGATAATGTGGGCTGGTATCCT 1847
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1848 CTAGAGTACCTGGGTACATAAACAGAAACTCCTGTAGGTAAAAAGTAATTTGTGCCATTAGTCTTTCTATGTTT 1921
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1922 CTGCATCCAGATAGAGTGCAGTTCATGAGGGAGGGGGCGGGGGACTGAAGGGGAAAGGGCGTTAAAGTGATACA 1995
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1996 TTTTTATACCAAATGTGTTTATTTTTTTGTGCAAGTAATCCTTAAAATTGCAATTGTATTAGGTGTTAAAATAA 2069
Query 298 ---------------- 297
Sbjct 2070 AGTTTTTAAAAAATTA 2085
