Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12075
- Subject:
- NM_134437.3
- Aligned Length:
- 2232
- Identities:
- 1499
- Gaps:
- 465
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCCCCGTGGCTGCAGCTCTGCTCCTTCTTCTTCACTGTCAACGCCTGTCTCAACGGCTCGCAGCTGGCAGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCGCGGGCGGCTCCGGCCGCGCGAGGGGCGCGGACACCTGTGGCTGGAGGGGAGTGGGGCCGGCCAGCAGGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACAGCGGACTGCACAACATCACCTTCAGATACGACAACTGTACCACCTACTTGAATCCCGGCGGGAAGCATGCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATTGCTGATGCTCAGAACATCACCATCAGCCAGTACGCTTGCCACGACCAGGTGGCAGTCACCATTCTTTGGTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCAGGGGCCCTTGGCATTGAATTCCTAAAAGGATTCCGAGTCATCCTGGAGGAGCTGAAGTCGGAGGGCAGAC 370
Query 1 --------------------------------------------------------------ATGGAATCTCAA 12
|||||||||||.
Sbjct 371 AGTGCCAACAGCTGATTCTAAAGGACCCCAAACAGCTCAACAGCAGCTTCAGAAGGACTGGAATGGAATCTCAG 444
Query 13 CCTTTCCTGAATATGAAATTTGAAACGGATTATTTCGTAAAGGTTGTCCCTTTTCCTTCCATTAAAAACGAAAG 86
|||||||||||||||||||||||.||||||||.||.||||||.||||||||||.||||||||||||||.|||||
Sbjct 445 CCTTTCCTGAATATGAAATTTGAGACGGATTACTTTGTAAAGATTGTCCCTTTCCCTTCCATTAAAAATGAAAG 518
Query 87 CAATTACCACCCTTTCTTCTTTAGAACCCGAGCCTGTGACCTGTTGTTACAGCCGGACAATCTAGCTTGTAAAC 160
|||||||||.||.||||||||.|||||.||.||||||||||||||||||||.||.|||||..|.||.|||||.|
Sbjct 519 CAATTACCATCCCTTCTTCTTCAGAACACGGGCCTGTGACCTGTTGTTACAACCTGACAACTTGGCCTGTAAGC 592
Query 161 CCTTCTGGAAGCCTCGGAACCTGAACATCAGCCAGCATGGCTCGGACATGCAGGTGTCCTTCGACCACGCACCG 234
|.||||||||||||||.||||||||.||||||||||||||.||.||||||||.||||||||||||||.||.|||
Sbjct 593 CTTTCTGGAAGCCTCGAAACCTGAATATCAGCCAGCATGGTTCTGACATGCACGTGTCCTTCGACCATGCCCCG 666
Query 235 CACAACTTCGGCTTCCGTTTCTTCTATCTTCACTACAAGCTCAAGCACGAAGGACCTTTCAAGCGAAAGACCTG 308
||.|||||||||||||||..||||.||.|||.|||.|||||||||||||||||.||.||||.|||.|.|||.||
Sbjct 667 CAGAACTTCGGCTTCCGTGGCTTCCATGTTCTCTATAAGCTCAAGCACGAAGGCCCCTTCAGGCGGAGGACTTG 740
Query 309 TAAGCAGGAGCAAACTACAGAGATGACCAGCTGCCTCCTTCAAAATGTTTCTCCAGGGGATTATATAATTGAGC 382
.|.||||||.||.|.||||||||..||||||||||||||.|||||.||||||||||||||.|||||.|||||||
Sbjct 741 CAGGCAGGACCAGAATACAGAGACAACCAGCTGCCTCCTCCAAAACGTTTCTCCAGGGGACTATATCATTGAGC 814
Query 383 TGGTGGATGACACTAACACAACAAGAAAAG-TGATGCATTATGCCTTAAAGCCAGTGCACTCCCCGTGGGCCGG 455
||||||||||||..|||||.||.||.|||| ||.| ||.||||...|.|||.|||||||.||.||.|||||.||
Sbjct 815 TGGTGGATGACAGCAACACCACCAGGAAAGCTGCT-CAGTATGTGGTGAAGTCAGTGCAGTCTCCCTGGGCTGG 887
Query 456 GCCCATCAGAGCCGTGGCCATCACAGTGCCACTGGTAGTCATATCGGCATTCGCGACGCTCTTCACTGTGATGT 529
.|||||||||||.|||||||||||.|||||.|||||.||||||||.||.|||||.||.||.|||||||||||||
Sbjct 888 ACCCATCAGAGCTGTGGCCATCACTGTGCCTCTGGTTGTCATATCTGCGTTCGCAACCCTGTTCACTGTGATGT 961
Query 530 GCCGCAAGAAGCAACAAGAAAATATATATTCACATTTAGATGAAGAGAGCTCTGAGTCTTCCACATACACTGCA 603
||.|.|||||||||||||||||||||||||||||||||||||||||.|||.|.|||||.|||||||||.||||.
Sbjct 962 GCAGAAAGAAGCAACAAGAAAATATATATTCACATTTAGATGAAGAAAGCCCGGAGTCGTCCACATACGCTGCG 1035
Query 604 GCACTCCCAAGAGAGAGGCTCCGGCCGCGGCCGAAGGTCTTTCTCTGCTATTCCAGTAAAGATGGCCAGAATCA 677
||.|||||.|||||.|||||||||||.|.|||.||||||||.||||||||.||||.||||||||||||||||||
Sbjct 1036 GCTCTCCCCAGAGACAGGCTCCGGCCTCAGCCCAAGGTCTTCCTCTGCTACTCCAATAAAGATGGCCAGAATCA 1109
Query 678 CATGAATGTCGTCCAGTGTTTCGCCTACTTCCTCCAGGACTTCTGTGGCTGTGAGGTGGCTCTGGACCTGTGGG 751
||||||.||.|||||||||||||||||.|||||.||.||.|||||||||||||||||||||||||||.||||||
Sbjct 1110 CATGAACGTGGTCCAGTGTTTCGCCTATTTCCTGCAAGATTTCTGTGGCTGTGAGGTGGCTCTGGACTTGTGGG 1183
Query 752 AAGACTTCAGCCTCTGTAGAGAAGGGCAGAGAGAATGGGTCATCCAGAAGATCCACGAGTCCCAGTTCATCATT 825
||||.|||||||||||.|||||.||||||||||||||||.|||.||||||||||||||||||||||||||||||
Sbjct 1184 AAGATTTCAGCCTCTGCAGAGAGGGGCAGAGAGAATGGGCCATTCAGAAGATCCACGAGTCCCAGTTCATCATT 1257
Query 826 GTGGTTTGTTCCAAAGGTATGAAGTACTTTGTGGACAAGAAGAACTACAAACACAAAGGAGGTGGCCGAGGCTC 899
||.||.||.||||||||.||||||||||||||.||.||||||||||.||.||||||||||||..||||.|||..
Sbjct 1258 GTCGTGTGCTCCAAAGGCATGAAGTACTTTGTAGATAAGAAGAACTTCAGACACAAAGGAGGCAGCCGCGGCGA 1331
Query 900 GGGGAAAGGAGAGCTCTTCCTGGTGGCGGTGTCAGCCATTGCCGAAAAGCTCCGCCAGGCCAAGCAGAGTTCGT 973
||.|.||||.|||.|||||||||||||.|||.||||||||||.||.||||||||.||||||||||||||.||.|
Sbjct 1332 GGCGCAAGGCGAGTTCTTCCTGGTGGCCGTGGCAGCCATTGCTGAGAAGCTCCGTCAGGCCAAGCAGAGCTCAT 1405
Query 974 CCGCGGCGCTCAGCAAGTTTATCGCCGTCTACTTTGATTATTCCTGCGAGGGAGACGTCCCCGGTATCCTAGAC 1047
|.||.||.||..|||||||.||||||||||||||.|||||||||||.||.||.||.||.|||.|.|.|||.|||
Sbjct 1406 CTGCCGCACTGCGCAAGTTCATCGCCGTCTACTTCGATTATTCCTGTGAAGGGGATGTACCCTGCAGCCTGGAC 1479
Query 1048 CTGAGTACCAAGTACAGACTCATGGACAATCTTCCTCAGCTCTGTTCCCACCTGCACTCCCGAGACCACGGCCT 1121
|||||.||||||||||..|||||||||.|.||||||.||||||||.||||.||||||||..||||.||.|
Sbjct 1480 CTGAGCACCAAGTACAAGCTCATGGACCACCTTCCTGAGCTCTGTGCCCATCTGCACTCAGGAGAGCAGG---- 1549
Query 1122 CCAGGAGCCGGGGCAGCA--CACGCGACAGGGCAGCAGAAGGAACTACTTCCGGAGCAAGTCAGGCCGGTCCCT 1193
|||.||.|||.||||| ||.||.||| ||||||||||||||||||||||||||||.||.|||||.|||||
Sbjct 1550 --AGGTGCTGGGTCAGCACCCAGGCCACA--GCAGCAGAAGGAACTACTTCCGGAGCAAATCGGGCCGCTCCCT 1619
Query 1194 ATACGTCGCCATTTGCAACATGCACCAGTTTATTGACGAGGAGCCCGACTGGTTCGAAAAGCAGTTCGTTCCCT 1267
.||.||.|||||||||||||||||||||||||||||.||||||||.||||||||.||.||||||||..|.||||
Sbjct 1620 GTATGTTGCCATTTGCAACATGCACCAGTTTATTGATGAGGAGCCTGACTGGTTTGAGAAGCAGTTTATACCCT 1693
Query 1268 TCCATCCTCCTCCACTGCGCTACCGGGAGCCAGTCTTGGAGAAATTTGATTCGGGCTTGGTTTTAAATGATGTC 1341
||||.|.|||.||..||||.||||.||||||||||.|||||||||||||.||.|||||||||||||||||||||
Sbjct 1694 TCCAACATCCCCCTGTGCGTTACCAGGAGCCAGTCCTGGAGAAATTTGACTCAGGCTTGGTTTTAAATGATGTC 1767
Query 1342 ATGTGCAAACCAGGGCCTGAGAGTGACTTCTGCCTAAAGGTAGAGGCGGCTGTTCTTGGGGCAACCGGACCAGC 1415
||..|||||||||||||.||||||||||||||.|..||.||.|||||...|||.||||||||..|.||.|||||
Sbjct 1768 ATAAGCAAACCAGGGCCAGAGAGTGACTTCTGTCGGAAAGTCGAGGCTTGTGTACTTGGGGCCGCTGGGCCAGC 1841
Query 1416 CGACTC---------CCAGCACGAGAGTCAGCATGGGGGCCTGGACCAAGACGGGGAGGCCCGGCCTGCCCTTG 1480
|||||| ||.| |||||||||||||..|||||||||||||||...|||||||.|||..||..||
Sbjct 1842 CGACTCTTATTCATACCTG---GAGAGTCAGCATGTAGGCCTGGACCAAGACACTGAGGCCCAGCCCTCCTGTG 1912
Query 1481 ACGGTAGCGCC---GCCCTGCAACCCCTGCTGCACACGGTGAAAGCCGGCAGCCCCTCGGACATGCCGCGGGAC 1551
| |||.||| |||.||||.||||||.|.|||.|.||||||||.|||||.|||||.||.|||||.||||||
Sbjct 1913 A---TAGTGCCCCTGCCTTGCAGCCCCTGTTACACGCAGTGAAAGCTGGCAGTCCCTCAGAGATGCCACGGGAC 1983
Query 1552 TCAGGCATCTATGACTCGTCTGTGCCCTCATCCGAGCTGTCTCTGCCACTGATGGAAGGACTCTCGACGGACCA 1625
||||||||.|||||.||.|||||.||||||||.|||||.||||||||.||||||||.||||||||..||||.||
Sbjct 1984 TCAGGCATATATGATTCTTCTGTACCCTCATCAGAGCTCTCTCTGCCTCTGATGGAGGGACTCTCTCCGGATCA 2057
Query 1626 GACAGAAACGTCTTCCCTGACGGAGAGCGTGTCCTCCTCTTCAGGCCTGGGTGAGGAGGAACCTCCTGCCCTTC 1699
||.||||||.|||||.|||||.|||||.||.||.|||||.||.|||||.|||||||||||.||.|||.||||.|
Sbjct 2058 GATAGAAACATCTTCTCTGACCGAGAGTGTATCTTCCTCCTCTGGCCTAGGTGAGGAGGACCCCCCTACCCTCC 2131
Query 1700 CTTCCAAGCTCCTCTCTTCTGGGTCATGCAAAGCAGATCTTGGTTGCCGCAGCTACACTGATGAACTCCACGCG 1773
|||||||||||||..|.||||||...|.|| .|||.|.||||||||.||||.|||||||.|||||.||.|||
Sbjct 2132 CTTCCAAGCTCCTTGCCTCTGGGGTGTCCA---GAGAACATGGTTGCCACAGCCACACTGACGAACTGCAAGCG 2202
Query 1774 GTCGCCCCTTTG 1785
.|.||.||||||
Sbjct 2203 CTTGCTCCTTTG 2214
