Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12092
- Subject:
- XM_006532536.3
- Aligned Length:
- 2890
- Identities:
- 1036
- Gaps:
- 1721
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAATGAAACAATGGCTACAGATTCTCCTCGGAGACCCAGTCGTTGTACTGGCGGAGTCGTGGTCCGCCCTCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCGTCACGGAGCAGTCCTACATGGAGAGCGTCGTGACTTTTCTGCAGGATGTTGTGCCACAGGTGTCTTATG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGTGGTCAAGAGCCCTGTGTAACAAGGAGGCTTACAGTGGGTCTCCCCTAACAGAAGAAAAGGAGAAGATAGTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGGGTCAGATTTGAGAATGCAGATCTGAACGACACATCACGGAATCTAGAATTTCATGAACTGCATAGCACTGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAATGAGCCTCCTCTGCTGGTTATGATCGGCTACAGTGACGGAATGCAGGTCTGGGGCATCCCTATCAGCGGGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGCCCAGGAGCTCTTCTCTGTACGACATGGTCCAGTCCGAGCAGCTAGAATCTTGCCTGCTCCACAGTTGGGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCCAAAAGTGTGATAACTTTGCTGAGAAAAGACCTCTTCTTGGTGTTTGTAAGAGCATTGGATCTTCAGGCAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GACACCACCGTACTGCTGTGTGGATCTGTATTCACTCCGGACTGGGGAAATGGTCAAGTCCATTCAGTTTAAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CACCCATTTATGATCTTCACTGTAACAAGCGGATCCTCGTCGTAGTCTTGCAGGAGAAAATTGCTGCCTTTGAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGCTGTACTTTCACAAAAAAATTTTTTGTCACAAGTTGTTATCCTTGTCCTGGGCCAAACATGAATCCCATTGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCTTGGGAGCCGCTGGCTTGCTTATGCAGAAAATAAGCTGATTCGCTGTCACCAGTCCCGTGGAGGAGCCTGTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAGACAACATTCAGTCTTACACTGCCACTGTCCTTAGTGCTGCTAAAACACTGAAAAGTGGCCTGACGATGGTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGGAAAGTGGTGACTCAACTGACAGGCACACTGCCCTCAGGGGTGACAGAAGATGACGTTGCCCTACACTGCAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTCAAGACGGAGCCCCTTGGTTCCAGGCATCATCACAGTCATAGACACTGAGACGGTTGGAGAGGGCCAGGTGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTGTAAGTGAGGACTCGGACAGTGATGGCATTGTGGCCCACTTCCCTGCCCATGAGAAGCCAGTATGCTGTATG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCTTTTAATACTAGTGGAATGCTTTTAGTCACAACAGATACTCTTGGCCATGACTTTCATGTCTTCCAAATCCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GACTCATCCTTGGTCATCATCACAGTGTGCTGTCCATCATCTGTACACACTTCACAGGGGAGAGACCGAGGCCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AAGTTCAGGACATCTGTTTCAGCCATGATTGTCGTTGGGTGGTGGTCAGTACCCTCCGGGGTACGTCCCACGTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTCCCCATCAATCCTTATGGTGGCCAGCCTTGTGTCCGCACACACATGTCACCACGAGTAGTCAATCGCATGAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCGTTTCCAGAAAAGTGCTGGGCTGGAAGAGATTGAACAAGAGCTGACATCTAAGCAAGGCGGCCGCTGTAGTC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTGTTCCAGGCCTGTCCAGCAGCCCTTCTGGCTCCCCGCTGCATGGGAAGCTGACCAGCCAAGACTCTTACAAT 1554
Query 1 ------------------------------------------------------ATGGTAGTGATGCCTCTTGC 20
||||||||||.|||||||||
Sbjct 1555 AACTTTACAAACAACAACCCTGGCAATCCCCGGCTTTCTCCCCTCCCCAGCTTGATGGTAGTGACGCCTCTTGC 1628
Query 21 ACAAATCAAGCAGCCAATGACATTGGGGACCATCACCAAACGAACCG--------------------------- 67
.||||||||.||||||||||||.||||.||||||||.||.|||||.|
Sbjct 1629 GCAAATCAAACAGCCAATGACACTGGGAACCATCACGAAGCGAACAGGGCCTTATCTCTTTGGAGCGGGGTGTT 1702
Query 68 ------------------GCAAAGTTAAACCTCCTCCACAAATTTCACCCAGCAAATCGATGGGCGGAGAATTT 123
|||||||||||.|.||||||||||||||.||.||||||||.||||||||.||.|||
Sbjct 1703 TTTCCATAAAGGCTCCATGCAAAGTTAAATCACCTCCACAAATTTCTCCAAGCAAATCAATGGGCGGTGAGTTT 1776
Query 124 TGTGTGGCTGCTATCTTCGGAACATCCAGGTCATGGTTTGCAAATAATGCAGGTCTGAAAAGAGAAAAAGATCA 197
||.||||||||..|.||.||.||.||||||||.|||||||||||.||.||.|||||||||.|.|||||||||||
Sbjct 1777 TGCGTGGCTGCAGTGTTTGGGACTTCCAGGTCGTGGTTTGCAAACAACGCTGGTCTGAAACGGGAAAAAGATCA 1850
Query 198 GTCCAAACAAGTTGTAGTTGAGTCCCTGTACATTATCAGTTGCTATGGCACCTTAGTGGAACACATGATGGAGC 271
|||||||||||||||||||||.||.||.|||||.|||||.|||||.||.|||||||||||.||||||||.||||
Sbjct 1851 GTCCAAACAAGTTGTAGTTGAATCTCTTTACATCATCAGCTGCTACGGGACCTTAGTGGAGCACATGATTGAGC 1924
Query 272 CGCGACCCCTCAGCACTGCACCCAAGATTAGTGACGACACACCACTGGAAATGATGACATCGCCTCGAGCCAGC 345
|.||.||..||||.|||||.||||||||.||||||||||||||||||||.||.|||||.||.||.||.||||||
Sbjct 1925 CCCGGCCGATCAGTACTGCTCCCAAGATAAGTGACGACACACCACTGGAGATAATGACGTCACCCCGTGCCAGC 1998
Query 346 TGGACTCTGGTTAGAACCCCTCAATGGAATGAATTGCAGCCACCGTTTAATGCAAACCACCCTCTGCTCCTCGC 419
|||||.||.||||||||.|||||.|||||||||.|||||||.||.||.|||||.||.|||||||||||||||||
Sbjct 1999 TGGACACTTGTTAGAACGCCTCAGTGGAATGAACTGCAGCCGCCATTCAATGCGAATCACCCTCTGCTCCTCGC 2072
Query 420 TGCAGATGCAGTACAGTATTATCAGTTCCTGCTTGCTGGC-CTGGTTCCCCCTGGAAGTCCTGGGCCCATTACT 492
||||||.|||||.||||||||.|||.|||||||.||.||| || .|||||||||||||||||||.|||||||||
Sbjct 2073 TGCAGAAGCAGTGCAGTATTACCAGCTCCTGCTGGCCGGCTCT-CTTCCCCCTGGAAGTCCTGGCCCCATTACT 2145
Query 493 CGACATGGGTCTTACGACAGTTTAGCTTCTGACCATAGTGGACAGGAAGATGAAGAATGGCTTTCCCAGGTTGA 566
|||||||||||.||.|||||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2146 CGACATGGGTCCTATGACAGCTTAGCCTCTGACCATAGTGGACAGGAAGATGAAGAATGGCTTTCCCAGGTTGA 2219
Query 567 AATTGTAACACACACTGGACCCCATAGACGTCTGTGGATGGGTCCACAGTTCCAGTTCAAAACCATCCATCCCT 640
||||||.||||||||.||||||||.||.||.|||||||||||.|||||.|||||.||||||||||||||..|||
Sbjct 2220 AATTGTGACACACACCGGACCCCACAGGCGCCTGTGGATGGGCCCACAATTCCATTTCAAAACCATCCAAACCT 2293
Query 641 CAGGCCAAACCACAGTTATCTCATCCAGTTCATCTGTGTTGCAGTCTCATGGTCCGAGTGACACGCCACAGCCT 714
|||||||.|||||.||.||.|||.|.|||||.||||||||.||.||.||.||.||.||.|||||.||||||||.
Sbjct 2294 CAGGCCAGACCACGGTCATATCAACTAGTTCTTCTGTGTTACAATCGCACGGACCTAGCGACACACCACAGCCG 2367
Query 715 CTTTTGGATTTTGATACAGATGATCTTGATCTCAACAGTCTCAGGATCCAGCCAGTCCGCTCTGACCCCGTCAG 788
||.|||||.||||||||.||||||||.|||||.|||||.||||||||||||||.||||||||||||||.|||||
Sbjct 2368 CTCTTGGACTTTGATACGGATGATCTAGATCTTAACAGCCTCAGGATCCAGCCTGTCCGCTCTGACCCAGTCAG 2441
Query 789 CATGCCAGGGTCATCCCGTCCAGTCTCTGATCGAAGGGGAGTTTCCACAGTGATTGATGCTGCCTCAGGTACCT 862
|||||||||||||||||||.|.|||||||||||.|||||||||||||||||||..|||||||||||||||||||
Sbjct 2442 CATGCCAGGGTCATCCCGTGCTGTCTCTGATCGGAGGGGAGTTTCCACAGTGACCGATGCTGCCTCAGGTACCT 2515
Query 863 TTGACAGGAGCGTGACCCTGCTGGAGGTGTGCGGGAGCTGGCCTGAGGGCTTCGGGCTGCGGCACATGTCCTCC 936
|||||.|||||||||||||||||||||||||.||||||||||||||||||||||||||||||||.|||||||||
Sbjct 2516 TTGACCGGAGCGTGACCCTGCTGGAGGTGTGTGGGAGCTGGCCTGAGGGCTTCGGGCTGCGGCATATGTCCTCC 2589
Query 937 ATGGAGCACACGGAGGAGGGCCTCCGGGAGCGACTTGCCGACGCCATGGCCGAGTCACCTAGCCGGGACGTCGT 1010
|||||||||.|.|||||||||||||||||.||.|||||.||.|||||||||||||||||.|||||.|||||.||
Sbjct 2590 ATGGAGCACTCAGAGGAGGGCCTCCGGGAACGGCTTGCAGATGCCATGGCCGAGTCACCAAGCCGAGACGTTGT 2663
Query 1011 GGGATCCGGAACA------------------------------------------------------------- 1023
||||||.||||||
Sbjct 2664 GGGATCTGGAACAGACACAGCCCTTGACGTAGCAGTCAAAAACAGCACCCCCGAGAGACCCATGGCTGTGAAGT 2737
Query 1024 -----GAACTTCAGCGAGAGGGAAGCATCGAGACTCTGAGTAACAGCTCAGGCTCCACCAGCGGCAGCATACCA 1092
||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||.|||
Sbjct 2738 GTTTGGAACTTCAGCGAGAGGGAAGCATCGAGACTCTGAGTAACAGCTCCGGCTCCACCAGCGGCAGCATCCCA 2811
Query 1093 AGAAACTTTGATGGCTACCGATCTCCGCTGCCCACCAATGAGAGCCAGCCCCTCAGCCTCTTCCCGACTGGCTT 1166
||||||||.||||||||||||||||||||.||.|||||.|||||||||||.||||||||||||||.||||||||
Sbjct 2812 AGAAACTTCGATGGCTACCGATCTCCGCTCCCTACCAACGAGAGCCAGCCGCTCAGCCTCTTCCCCACTGGCTT 2885
Query 1167 CCCG 1170
|||.
Sbjct 2886 CCCC 2889
