Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12092
- Subject:
- XM_017024783.2
- Aligned Length:
- 3255
- Identities:
- 1102
- Gaps:
- 2142
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAATGAAGCTATGGCTACAGATTCCCCAAGAAGACCCAGTCGTTGTACTGGTGGAGTTGTGGTTCGCCCCCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCTGTCACAGAGCAGTCCTACATGGAAAGTGTTGTGACTTTTCTGCAGGATGTTGTGCCACAGGCTTACAGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAACACCTCTAACAGAAGAAAAGGAGAAAATAGTCTGGGTCAGATTTGAAAATGCAGATTTAAATGATACATCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGAAATCTGGAATTTCATGAAATACATAGTACTGGGAATGAACCGCCTTTGTTGATTATGATTGGCTACAGTGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGAATGCAGGTCTGGAGCATCCCTATCAGTGGTGAAGCACAAGAGCTCTTCTCTGTTCGACATGGCCCAATTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAGCGGCTAGAATCTTGCCTGCTCCACAGTTTGGTGCTCAAAAATGTGATAACTTTGCTGAAAAAAGACCCCTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTTGGTGTTTGTAAGAGCATTGGATCTTCTGGCACAAGCCCACCGTACTGTTGTGTGGATCTGTATTCACTTCG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TACTGGGGAGATGGTCAAGTCCATTCAATTTAAGACACCTATTTATGATCTCCATTGCAATAAACGGATCCTTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCGTAGTCTTGCAGGAGAAAATTGCTGCCTTTGATAGCTGTACTTTCACGAAGAAATTCTTTGTTACAAGCTGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TATCCATGTCCAGGGCCAAACATGAATCCTATTGCTCTTGGGAGCCGCTGGCTTGCTTATGCAGAAAACAAGTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GATTCGATGTCATCAGTCCCGTGGTGGAGCCTGTGGAGACAACATTCAGTCTTATACTGCCACAGTCATTAGTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTGCTAAAACATTGAAAAGTGGCCTGACAATGGTAGGGAAAGTGGTGACTCAGCTGACAGGCACACTGCCTTCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGTGTGACAGAAGATGATGTTGCCATCCACAGTAATTCACGGCGGAGTCCTTTGGTCCCAGGCATCATCACAGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TATTGACACCGAAACCGTTGGAGAGGGCCAGGTGCTTGTGAGTGAGGATTCTGACAGTGATGGCATTGTGGCCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACTTCCCTGCCCATGAGAAGCCAGTGTGCTGCATGGCTTTTAATACAAGTGGAATGCTTCTAGTCACAACAGAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACCCTTGGCCATGACTTTCATGTCTTCCAAATTCTGACTCATCCTTGGTCCTCATCACAATGTGCTGTCCACCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCTGTATACTCTTCACAGGGGAGAAACTGAAGCCAAAGTACAGGACATCTGCTTCAGCCATGACTGTCGCTGGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTGTGGTCAGTACTCTCCGGGGTACTTCCCACGTTTTCCCCATCAACCCTTATGGTGGCCAGCCTTGTGTTCGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACACATATGTCACCACGAGTAGTGAATCGCATGAGCCGTTTCCAGAAAAGTGCTGGACTGGAAGAGATTGAACA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGAACTGACGTCTAAGCAAGGAGGTCGCTGTAGCCCTGTTCCAGGTCTATCAAGCAGCCCTTCTGGGTCACCCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGCATGCTAATCAACAAATCAATACTAAGGAACTGATTGGAAGCTTTTTGAATGTGGGAAGGGCATACCGCCTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ATAGGTATCAGTGGTCTATCAGGGAAACTGAACAGCCAAGACTCCTATAACAATTTTACCAACAACAACCCTGG 1628
Query 1 -------------------------------ATGGTAGTGATGCCTCTTGCACAAATCAAGCAGCCAATGACAT 43
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CAACCCTCGGCTCTCTCCTCTTCCCAGCTTGATGGTAGTGATGCCTCTTGCACAAATCAAGCAGCCAATGACAT 1702
Query 44 TGGGGACCATCACCAAACGAACCG---------------------------------------------GCAAA 72
|||||||||||||||||||||||| |||||
Sbjct 1703 TGGGGACCATCACCAAACGAACCGGGCCTTATCTCTTTGGAGCGGGGTGTTTTTCCATAAAAGCCCCATGCAAA 1776
Query 73 GTTAAACCTCCTCCACAAATTTCACCCAGCAAATCGATGGGCGGAGAATTTTGTGTGGCTGCTATCTTCGGAAC 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GTTAAACCTCCTCCACAAATTTCACCCAGCAAATCGATGGGCGGAGAATTTTGTGTGGCTGCTATCTTCGGAAC 1850
Query 147 ATCCAGGTCATGGTTTGCAAATAATGCAGGTCTGAAAAGAGAAAAAGATCAGTCCAAACAAGTTGTAGTTGAGT 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 ATCCAGGTCATGGTTTGCAAATAATGCAGGTCTGAAAAGAGAAAAAGATCAGTCCAAACAAGTTGTAGTTGAGT 1924
Query 221 CCCTGTACATTATCAGTTGCTATGGCACCTTAGTGGAACACATGATGGAGCCGCGACCCCTCAGCACTGCACCC 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CCCTGTACATTATCAGTTGCTATGGCACCTTAGTGGAACACATGATGGAGCCGCGACCCCTCAGCACTGCACCC 1998
Query 295 AAGATTAGTGACGACACACCACTGGAAATGATGACATCGCCTCGAGCCAGCTGGACTCTGGTTAGAACCCCTCA 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 AAGATTAGTGACGACACACCACTGGAAATGATGACATCGCCTCGAGCCAGCTGGACTCTGGTTAGAACCCCTCA 2072
Query 369 ATGGAATGAATTGCAGCCACCGTTTAATGCAAACCACCCTCTGCTCCTCGCTGCAGATGCAGTACAGTATTATC 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 ATGGAATGAATTGCAGCCACCGTTTAATGCAAACCACCCTCTGCTCCTCGCTGCAGATGCAGTACAGTATTATC 2146
Query 443 AGTTCCTGCTTGCTGGCCTGGTTCCCCCTGGAAGTCCTGGGCCCATTACTCGACATGGGTCTTACGACAGTTTA 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 AGTTCCTGCTTGCTGGCCTGGTTCCCCCTGGAAGTCCTGGGCCCATTACTCGACATGGGTCTTACGACAGTTTA 2220
Query 517 GCTTCTGACCATAGTGGACAGGAAGATGAAGAATGGCTTTCCCAGGTTGAAATTGTAACACACACTGGACCCCA 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GCTTCTGACCATAGTGGACAGGAAGATGAAGAATGGCTTTCCCAGGTTGAAATTGTAACACACACTGGACCCCA 2294
Query 591 TAGACGTCTGTGGATGGGTCCACAGTTCCAGTTCAAAACCATCCATCCCTCAGGCCAAACCACAGTTATCTCAT 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 TAGACGTCTGTGGATGGGTCCACAGTTCCAGTTCAAAACCATCCATCCCTCAGGCCAAACCACAGTTATCTCAT 2368
Query 665 CCAGTTCATCTGTGTTGCAGTCTCATGGTCCGAGTGACACGCCACAGCCTCTTTTGGATTTTGATACAGATGAT 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 CCAGTTCATCTGTGTTGCAGTCTCATGGTCCGAGTGACACGCCACAGCCTCTTTTGGATTTTGATACAGATGAT 2442
Query 739 CTTGATCTCAACAGTCTCAGGATCCAGCCAGTCCGCTCTGACCCCGTCAGCATGCCAGGGTCATCCCGTCCAGT 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 CTTGATCTCAACAGTCTCAGGATCCAGCCAGTCCGCTCTGACCCCGTCAGCATGCCAGGGTCATCCCGTCCAGT 2516
Query 813 CTCTGATCGAAGGGGAGTTTCCACAGTGATTGATGCTGCCTC-------------------------------- 854
||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 CTCTGATCGAAGGGGAGTTTCCACAGTGATTGATGCTGCCTCAGTGGACTCTTCCACCGCCCTTGAGTGGGGAA 2590
Query 855 -------------------------------------------------------------------------- 854
Sbjct 2591 CATCCAGGCCTTCACACTCACGCTCAGCCCATCACCCCTCTGTGCAAGGTGCAAGGTCCTCTGCCCACCTGAAG 2664
Query 855 -------------------------------------------------------------------------- 854
Sbjct 2665 CCTCAAGGCCTGATGGAAACCATCCACAGCCACTCTAGGATGAGTCAACATTGCATGCAGCCAGCCATGGCCAC 2738
Query 855 -------------------------------------------------------------------------- 854
Sbjct 2739 TGGGAGAAGAGTCAGACATGGGCCATGGAGCTGCAGGCTCACCTGCCCCCGGCTGAGTCAGGACCGAGCACAGG 2812
Query 855 -------------------------AGGTACCTTTGACAGGAGCGTGACCCTGCTGGAGGTGTGCGGGAGCTGG 903
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 ACTTGACAGAGGAGGCATCGCAGCAAGGTACCTTTGACAGGAGCGTGACCCTGCTGGAGGTGTGCGGGAGCTGG 2886
Query 904 CCTGAGGGCTTCGGGCTGCGGCACATGTCCTCCATGGAGCACACGGAGGAGGGCCTCCGGGAGCGACTTGCCGA 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 CCTGAGGGCTTCGGGCTGCGGCACATGTCCTCCATGGAGCACACGGAGGAGGGCCTCCGGGAGCGACTTGCCGA 2960
Query 978 CGCCATGGCCGAGTCACCTAGCCGGGACGTCGTGGGATCCGGAACAGA-ACTTCAGC----GAGAGGGAAGCA- 1045
|||||||||||||||||||||||||||||||||||||||||||||||| | |||| || .|.||||
Sbjct 2961 CGCCATGGCCGAGTCACCTAGCCGGGACGTCGTGGGATCCGGAACAGACA---CAGCCCTTGA---CGTAGCAG 3028
Query 1046 ---------TC--------GAGACTC-TG--AGT---------------------------------------- 1059
|| |||||.| || |||
Sbjct 3029 TAAAAACCTTCCCCCCTGAGAGACACGTGGCAGTGAAGTGTTTTGGGAAAAAAAAAGGAAAAAAAAAACAATGC 3102
Query 1060 -AACAGCTCAGGCTCCACCAGCGGC----AGCATACC-------AAGAAA-----CTTT---GATGG------- 1106
|||||| ||||||.| |||| ||| ||.||| |.|| |||||
Sbjct 3103 CAACAGC----------CCAGCGTCCGTGAGCA-ACCCAACAGTAACAAAGCATGCGTTCGGGATGGAGGAAGA 3165
Query 1107 -CTACCGATCTCCGCTGCCCACCAATGAGAG--------CCAGCCCCTCAGCCTCTTCCCGACTGGCTTCCCG 1170
|| ||.|| ||||| |.||.|.||.||
Sbjct 3166 ACT-------TCAGC-----------GAGAGGGAAGCATCGAGACTCTGAG---------------------- 3198
