Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12092
- Subject:
- XM_017314343.1
- Aligned Length:
- 2779
- Identities:
- 1036
- Gaps:
- 1610
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAATGAAACAATGGCTACAGATTCTCCTCGGAGACCCAGTCGTTGTACTGGCGGAGTCGTGGTCCGCCCTCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCGTCACGGAGCAGTCCTACATGGAGAGCGTCGTGACTTTTCTGCAGGATGTTGTGCCACAGGTGTCTTATG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGTGGTCAAGAGCCCTGTGTAACAAGGAGGCTTACAGTGGGTCTCCCCTAACAGAAGAAAAGGAGAAGATAGTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGGGTCAGATTTGAGAATGCAGATCTGAACGACACATCACGGAATCTAGAATTTCATGAACTGCATAGCACTGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAATGAGCCTCCTCTGCTGGTTATGATCGGCTACAGTGACGGAATGCAGGTCTGGGGCATCCCTATCAGCGGGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGCCCAGGAGCTCTTCTCTGTACGACATGGTCCAGTCCGAGCAGCTAGAATCTTGCCTGCTCCACAGTTGGGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCCAAAAGTGTGATAACTTTGCTGAGAAAAGACCTCTTCTTGGTGTTTGTAAGAGCATTGGATCTTCAGGCAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GACACCACCGTACTGCTGTGTGGATCTGTATTCACTCCGGACTGGGGAAATGGTCAAGTCCATTCAGTTTAAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CACCCATTTATGATCTTCACTGTAACAAGCGGATCCTCGTCGTAGTCTTGCAGGAGAAAATTGCTGCCTTTGAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGCTGTACTTTCACAAAAAAATTTTTTGTCACAAGTTGTTATCCTTGTCCTGGGCCAAACATGAATCCCATTGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCTTGGGAGCCGCTGGCTTGCTTATGCAGAAAATAAGCTGATTCGCTGTCACCAGTCCCGTGGAGGAGCCTGTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAGACAACATTCAGTCTTACACTGCCACTGTCCTTAGTGCTGCTAAAACACTGAAAAGTGGCCTGACGATGGTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGGAAAGTGGTGACTCAACTGACAGGCACACTGCCCTCAGGGGTGACAGAAGATGACGTTGCCCTACACTGCAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTCAAGACGGAGCCCCTTGGTTCCAGGCATCATCACAGTCATAGACACTGAGACGGTTGGAGAGGGCCAGGTGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTGTAAGTGAGGACTCGGACAGTGATGGCATTGTGGCCCACTTCCCTGCCCATGAGAAGCCAGTATGCTGTATG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCTTTTAATACTAGTGGAATGCTTTTAGTCACAACAGATACTCTTGGCCATGACTTTCATGTCTTCCAAATCCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GACTCATCCTTGGTCATCATCACAGTGTGCTGTCCATCATCTGTACACACTTCACAGGGGAGAGACCGAGGCCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AAGTTCAGGACATCTGTTTCAGCCATGATTGTCGTTGGGTGGTGGTCAGTACCCTCCGGGGTACGTCCCACGTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTCCCCATCAATCCTTATGGTGGCCAGCCTTGTGTCCGCACACACATGTCACCACGAGTAGTCAATCGCATGAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCGTTTCCAGAAAAGTGCTGGGCTGGAAGAGATTGAACAAGAGCTGACATCTAAGCAAGGCGGCCGCTGTAGTC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTGTTCCAGGCCTGTCCAGCAGCCCTTCTGGCTCCCCGCTGCATGGGAAGCTGACCAGCCAAGACTCTTACAAT 1554
Query 1 ------------------------------------------------------ATGGTAGTGATGCCTCTTGC 20
||||||||||.|||||||||
Sbjct 1555 AACTTTACAAACAACAACCCTGGCAATCCCCGGCTTTCTCCCCTCCCCAGCTTGATGGTAGTGACGCCTCTTGC 1628
Query 21 ACAAATCAAGCAGCCAATGACATTGGGGACCATCACCAAACGAACCGGCAAAGTTAAACCTCCTCCACAAATTT 94
.||||||||.||||||||||||.||||.||||||||.||.|||||.||||||||||||.|.|||||||||||||
Sbjct 1629 GCAAATCAAACAGCCAATGACACTGGGAACCATCACGAAGCGAACAGGCAAAGTTAAATCACCTCCACAAATTT 1702
Query 95 CACCCAGCAAATCGATGGGCGGAGAATTTTGTGTGGCTGCTATCTTCGGAACATCCAGGTCATGGTTTGCAAAT 168
|.||.||||||||.||||||||.||.|||||.||||||||..|.||.||.||.||||||||.|||||||||||.
Sbjct 1703 CTCCAAGCAAATCAATGGGCGGTGAGTTTTGCGTGGCTGCAGTGTTTGGGACTTCCAGGTCGTGGTTTGCAAAC 1776
Query 169 AATGCAGGTCTGAAAAGAGAAAAAGATCAGTCCAAACAAGTTGTAGTTGAGTCCCTGTACATTATCAGTTGCTA 242
||.||.|||||||||.|.||||||||||||||||||||||||||||||||.||.||.|||||.|||||.|||||
Sbjct 1777 AACGCTGGTCTGAAACGGGAAAAAGATCAGTCCAAACAAGTTGTAGTTGAATCTCTTTACATCATCAGCTGCTA 1850
Query 243 TGGCACCTTAGTGGAACACATGATGGAGCCGCGACCCCTCAGCACTGCACCCAAGATTAGTGACGACACACCAC 316
.||.|||||||||||.||||||||.|||||.||.||..||||.|||||.||||||||.||||||||||||||||
Sbjct 1851 CGGGACCTTAGTGGAGCACATGATTGAGCCCCGGCCGATCAGTACTGCTCCCAAGATAAGTGACGACACACCAC 1924
Query 317 TGGAAATGATGACATCGCCTCGAGCCAGCTGGACTCTGGTTAGAACCCCTCAATGGAATGAATTGCAGCCACCG 390
||||.||.|||||.||.||.||.|||||||||||.||.||||||||.|||||.|||||||||.|||||||.||.
Sbjct 1925 TGGAGATAATGACGTCACCCCGTGCCAGCTGGACACTTGTTAGAACGCCTCAGTGGAATGAACTGCAGCCGCCA 1998
Query 391 TTTAATGCAAACCACCCTCTGCTCCTCGCTGCAGATGCAGTACAGTATTATCAGTTCCTGCTTGCTGGC-CTGG 463
||.|||||.||.|||||||||||||||||||||||.|||||.||||||||.|||.|||||||.||.||| || .
Sbjct 1999 TTCAATGCGAATCACCCTCTGCTCCTCGCTGCAGAAGCAGTGCAGTATTACCAGCTCCTGCTGGCCGGCTCT-C 2071
Query 464 TTCCCCCTGGAAGTCCTGGGCCCATTACTCGACATGGGTCTTACGACAGTTTAGCTTCTGACCATAGTGGACAG 537
|||||||||||||||||||.||||||||||||||||||||.||.|||||.|||||.||||||||||||||||||
Sbjct 2072 TTCCCCCTGGAAGTCCTGGCCCCATTACTCGACATGGGTCCTATGACAGCTTAGCCTCTGACCATAGTGGACAG 2145
Query 538 GAAGATGAAGAATGGCTTTCCCAGGTTGAAATTGTAACACACACTGGACCCCATAGACGTCTGTGGATGGGTCC 611
|||||||||||||||||||||||||||||||||||.||||||||.||||||||.||.||.|||||||||||.||
Sbjct 2146 GAAGATGAAGAATGGCTTTCCCAGGTTGAAATTGTGACACACACCGGACCCCACAGGCGCCTGTGGATGGGCCC 2219
Query 612 ACAGTTCCAGTTCAAAACCATCCATCCCTCAGGCCAAACCACAGTTATCTCATCCAGTTCATCTGTGTTGCAGT 685
|||.|||||.||||||||||||||..||||||||||.|||||.||.||.|||.|.|||||.||||||||.||.|
Sbjct 2220 ACAATTCCATTTCAAAACCATCCAAACCTCAGGCCAGACCACGGTCATATCAACTAGTTCTTCTGTGTTACAAT 2293
Query 686 CTCATGGTCCGAGTGACACGCCACAGCCTCTTTTGGATTTTGATACAGATGATCTTGATCTCAACAGTCTCAGG 759
|.||.||.||.||.|||||.||||||||.||.|||||.||||||||.||||||||.|||||.|||||.||||||
Sbjct 2294 CGCACGGACCTAGCGACACACCACAGCCGCTCTTGGACTTTGATACGGATGATCTAGATCTTAACAGCCTCAGG 2367
Query 760 ATCCAGCCAGTCCGCTCTGACCCCGTCAGCATGCCAGGGTCATCCCGTCCAGTCTCTGATCGAAGGGGAGTTTC 833
||||||||.||||||||||||||.||||||||||||||||||||||||.|.|||||||||||.|||||||||||
Sbjct 2368 ATCCAGCCTGTCCGCTCTGACCCAGTCAGCATGCCAGGGTCATCCCGTGCTGTCTCTGATCGGAGGGGAGTTTC 2441
Query 834 CACAGTGATTGATGCTGCCTCAGGTACCTTTGACAGGAGCGTGACCCTGCTGGAGGTGTGCGGGAGCTGGCCTG 907
||||||||..||||||||||||||||||||||||.|||||||||||||||||||||||||.|||||||||||||
Sbjct 2442 CACAGTGACCGATGCTGCCTCAGGTACCTTTGACCGGAGCGTGACCCTGCTGGAGGTGTGTGGGAGCTGGCCTG 2515
Query 908 AGGGCTTCGGGCTGCGGCACATGTCCTCCATGGAGCACACGGAGGAGGGCCTCCGGGAGCGACTTGCCGACGCC 981
|||||||||||||||||||.||||||||||||||||||.|.|||||||||||||||||.||.|||||.||.|||
Sbjct 2516 AGGGCTTCGGGCTGCGGCATATGTCCTCCATGGAGCACTCAGAGGAGGGCCTCCGGGAACGGCTTGCAGATGCC 2589
Query 982 ATGGCCGAGTCACCTAGCCGGGACGTCGTGGGATCCGGAACAGAACTTCAGCGAGAGGGAAGCATCGAGACTCT 1055
||||||||||||||.|||||.|||||.||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 2590 ATGGCCGAGTCACCAAGCCGAGACGTTGTGGGATCTGGAACAGAACTTCAGCGAGAGGGAAGCATCGAGACTCT 2663
Query 1056 GAGTAACAGCTCAGGCTCCACCAGCGGCAGCATACCAAGAAACTTTGATGGCTACCGATCTCCGCTGCCCACCA 1129
||||||||||||.||||||||||||||||||||.|||||||||||.||||||||||||||||||||.||.||||
Sbjct 2664 GAGTAACAGCTCCGGCTCCACCAGCGGCAGCATCCCAAGAAACTTCGATGGCTACCGATCTCCGCTCCCTACCA 2737
Query 1130 ATGAGAGCCAGCCCCTCAGCCTCTTCCCGACTGGCTTCCCG 1170
|.|||||||||||.||||||||||||||.|||||||||||.
Sbjct 2738 ACGAGAGCCAGCCGCTCAGCCTCTTCCCCACTGGCTTCCCC 2778
