Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12096
- Subject:
- NR_160927.1
- Aligned Length:
- 2046
- Identities:
- 426
- Gaps:
- 1588
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGGGTGTTGGTGCTAGCGCGGCTTCCCGGCGCTCGTGGAATCTTCTGGAGCCCTTTTCTCCACTCAGCGAGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGAGAGTGCGGAAGTCTCCGGCTGGTGGGGCATGGCCCAGGAGCACTGCAAGTCCTAGGGTTCCCAAACCTGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGTGGCCGCCTGGGCCCGCGAGGGCGGGAAGGGCTCGAGTACAGTGACCCAGCGGGAGCTGTGTGTGAACGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAAGCTCTTGGAACAGTCTTGCCCCCCCCCCCCCCCCTCTTACGGGCGCCTCTTCTCTTTTTGGGAACGTGGCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGCAAAAAATGCTTGAGCCAGAGTGATGATGCGGGTGTGCTGGTTGGTGAGACAGGACAGCCGGCACCAGCGAA 370
Query 1 -------------------------------------------------------------------ATG--CA 5
||| |.
Sbjct 371 TCAGACTTCCACATTTGGAAGCAGTTGTGATTGGGCGTGGCCCAGAGACCAAGATCACTGATAAGAAATGTTCT 444
Query 6 GGACCCCAA----AATGCAG-GTTTACAAAG----ATG---------AGCAGGTGGTGGTGATAAAGGA-TAAA 60
.|||..||| ||.|||| ||.||..||| ||| ||||||| |||| |.||
Sbjct 445 CGACAGCAAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGT-----------AGGAGTCAA 507
Query 61 TACCCAAAGGCCCGTTACCATTGGCT-GGTCTTACCGTGGACCTCCATT-------TCCA----GTCTGAAGGC 122
| |||| || |.|||||.|| .|||.|| ||| .||| | |||| ||
Sbjct 508 T-CCCA----CC----AGCATTGACTCAGTCGTA------------ATTGGGAAGGACCAAGAGG--TGAA-GC 557
Query 123 TG-----TGGCCAGG-------------GAACACCTTGAACTCCTTAAGCATAT-------------------- 158
|| |||||||| ||| |||||| |||..|||||
Sbjct 558 TGCAGCCTGGCCAGGTTCTCCACATGGTGAA-----TGAACT--TTATCCATATATTGTAGAGTTTGAGGAAGA 624
Query 159 ------GCACACTG---TGG--------GGGAAAAG-----------------GTGATTGTA--------GATT 190
|.||.||| ||| .||||.|| ||||||.|| |||.
Sbjct 625 GGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATG 698
Query 191 TT---------------GCTGGGTC---------------CAGCAAACTC-----------CGCTTCC------ 217
.| ||||||.| .||| ||||| |..|.||
Sbjct 699 CTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGC-AACTCTGGCCAATGCTCTGTGCCCCTAAA 771
Query 218 ----------GAT----------------------TGGGCTAC------CACGCC------ATTCCGAGTATG- 246
||| |||||.|| ||.|.| |||.| ||||
Sbjct 772 GAAGGGAAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTC---TATGC 842
Query 247 ---------------AGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAA 305
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 843 AGGACCCCAAAATGCAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAA 916
Query 306 AAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATGGTACAAGAGGCTG 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 917 AAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATGGTACAAGAGGCTG 990
Query 380 GTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTG 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 991 GTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTG 1064
Query 454 CTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAG----------------------- 504
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1065 CTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGC 1138
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1139 TGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTCTACTCATTTCCT 1212
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1213 AAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTAC 1286
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1287 TTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACCA 1360
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1361 TCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACACTGACCTAATGCAGAGTATG 1434
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1435 GAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAGATTTATCCTCCGCCTCTGTAGGCATGGACAACCTTTAA 1508
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1509 TCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGT 1582
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1583 AATATTCTTTTCCCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAGATTACC 1656
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1657 TAAATGTTCCCTTCTCAGGAATTCTGTCTCATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATGATGGTGTGGG 1730
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1731 GGGTTGGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAAACAGCCACATGTTCGTCATGATTGAGCT 1804
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1805 GTGAAGTCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAATTTGTTTGAGGCATCTCTCTTAAGTAGGTGGAAA 1878
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1879 CTATTGAAGTTCAGCTAACAATCACAGCATAGGTTCTGATGCATGGAAAGGTGGTTGGTGAATGAAAAAGTTGC 1952
Query 505 ------------------------------------------------ 504
Sbjct 1953 GTAGAGCCACTACTTTCTTTTTCCCTGAGAATAAATTTGGATAAAACA 2000
