Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12096
- Subject:
- XR_001746326.2
- Aligned Length:
- 2374
- Identities:
- 504
- Gaps:
- 1870
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AACGTGAATTTGTCCGTCTCCGACTTCTGGAGGTAAGGCGGTCGTCAGCCTATCTCTTCTGCTGGCTGGGCTCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATGCCGCGGAGTGATGATGCGGGTGTGCTGGTTGGTGAGACAGGACAGCCGGCACCAGCGAATCAGACTTCCAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATTTGGAAGCAGTTGTGATTGGGCGTGGCCCAGAGACCAAGATCACTGATAAGAAATGTTCTCGACAGCAAGTA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAATCCCACCAGCATTGACTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTATC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACAGTGATTCTATAGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGCCAATGCTCTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTC 592
Query 1 -----------------ATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGATAAAGGAT 57
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGATAAAGGAT 666
Query 58 AAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAG 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAG 740
Query 132 GGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCA 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCA 814
Query 206 AACTCCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGA-------------------------------- 247
||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AACTCCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCTGGCTGGGTGTGGGGAAGACCTGCCAGAGC 888
Query 248 -------------------------------------------------------------------------- 247
Sbjct 889 CACATTGGACAAGGTGGTTCCCATTGCCAAGTAGATGGACAAGATGGTGCAGAAGAATACAGCTGGAGCATTGG 962
Query 248 -------------------------------------------------------------------------- 247
Sbjct 963 ATTTGCCAAAGGAGCTTAAAAATATTCCCATGACCATGGAATTATTACAGCCCCCAGAAGAATCAGAATATCAG 1036
Query 248 -------------------------------------------------------------------------- 247
Sbjct 1037 TTAATGCTAATGGCAAGCAGCATAAAGATGAAGAAGTTACATCTTTAACAGTCTGTCATGAAATCTGGGAAAAA 1110
Query 248 -------------------------------------------------------------------------- 247
Sbjct 1111 GTTACTATCAACCGAGAAAGACCCTGAAGAAAAGAAAAAAGAACCTGCAGTTACATTGCAGAATAACTCTGAAG 1184
Query 248 --------------------------------------------GCCATGTACATCTTCATGTGATCAGCCAGG 277
||||||||||||||||||||||||||||||
Sbjct 1185 CGAGAGAAGAAAGTAGCTCCGGTGGCAGTGCAAGCAGCAGAGAGGCCATGTACATCTTCATGTGATCAGCCAGG 1258
Query 278 ATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAA 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAA 1332
Query 352 GCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCC 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCC 1406
Query 426 CCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGA 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGA 1480
Query 500 CACAG--------------------------------------------------------------------- 504
|||||
Sbjct 1481 CACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGG 1554
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1555 GTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATTATTGAGT 1628
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1629 GGCCACAATGTAGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGA 1702
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1703 GGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCA 1776
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1777 TGTTCACACTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAGATTTATCCTC 1850
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1851 CGCCTCTGTAGGCATGGACAACCTTTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGATACTGATG 1924
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1925 GGTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTC 1998
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1999 CTTCCATGCCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCTGTCTCATCAGTTCTTCACAGT 2072
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2073 GAGAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAA 2146
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2147 ACAGCCACATGTTCGTCATGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAATTTGTT 2220
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2221 TGAGGCATCTCTCTTAAGTAGGTGGAAACTATTGAAGTTCAGCTAACAATCACAGCATAGGTTCTGATGCATGG 2294
Query 505 -------------------------------------------------------------------------- 504
Sbjct 2295 AAAGGTGGTTGGTGAATGAAAAAGTTGCGTAGAGCCACTACTTTCTTTTTCCCTGAGAATAAATTTGGATAAAA 2368
Query 505 ------ 504
Sbjct 2369 CAGTTG 2374
