Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12102
- Subject:
- XM_017318623.1
- Aligned Length:
- 5279
- Identities:
- 488
- Gaps:
- 4720
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTTTCTGCAACCCCTCTGTATGGGAACGTTCACAGCTGGATGAACAGCGAGAGGGTCCGCATGTGTGGAAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAGTGAAGACAGGAAAATTCCTGTGAATGATGGCGACGCTTCAAAAGCCAGGCTGGAGCTGAGGGAGGAGACTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCTGAGTCACAGCGTGGTGGATACCAGTGGAGCCCATCGGATCGATGGCCTGGCAGCACTGAGCATGGACCGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACAGGCCTCATCCGGGAAGGGCTCCGGGTCCCTGGAAACATCGTTTATTCTGGCTTGTGTGGATTGGGCTCAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAAAGGTCGGGAGGCTACCCCAAGCTCTCTCAGTGGCCTTGGGTTTTCTTCGGAAAGAAATCCAGAGATGCAAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCAAACCGAATACTCCCGAGACAGTGGAGGCTTCTGCTGTCTCTGGAAAACCCCCAAATGGCTTCAGTGCTATA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TACAAAACACCGCCTGGGATACAAAAGAGCGCTGTAGCTACAGCGGAAAGCTTGGGTTTGGATAGGCCTGCCAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGACAAACAGAGCCCTCTCAACATCAATGGTGCTAGTTACCTGCGGCTGCCCTGGGTCAACCCTTACATGGAGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGCCACTCCAGCCATATACCCTTTCCTCGACTCGCCAAATAAGTATTCACTGAATATGTACAAGGCCTTGCTA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTCAGCAGTCCTACGGCTTGGCCCAGCCACTGTATTCTCCTGTCTGCACCAGTGGGGAACGCTTCCTCTACCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCCACCCCCACACTATGTCAACCCTCACATCCCCTCCTCCTTGGCTTCACCCATGAGGCTCTCCACACCTTCAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCTCTGCGGCCATTCCACCTCTCGTCCACTGCTCAGACAAAAGCCTCCCATGGAAGATGGGCGTCAACCCTGGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AACCCAGTAGATTCCCACAGTTACCCCCACATCCAAAACAGTAAACAGCCCCGGGTGACCTCTGCCAAGGCAGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAATAGTGGCCTGCCAGGGGACACAGCTCTCCTGTTGCCTCCTTCACCTCGGCCCTCAGCCCGGGTCCACCTTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAACTCAGCCCGCTGCAGAGACCTACTCCGAGTTCCACAAGCACTATCCCAGGATCTCCACCTCTCCCTCAGTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACCCTGACGAAGCCATACATGACAGCCAATAGCGAGTTCTCTACATCCAGGCTGTCCAATGGCAAGTACCCCAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGCTCTAGATGGGGGCGACTGTGCTCAATCCATGCCTGGGCACACCCGGAAGACAACGGTTCAAGACAGAAAAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATGGGGGCTCACCACCTCTGTTGGAAAAGCAGACCGTTACCAAAGATGTCACAGACAAACCACTTGACCTGTCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCTAAAGTGGTGGATGCGGACGCTTCCAAAGGTGACCACATGAAAAAGATGGCTCCCACAGTCCTGGTTCACAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TCGGGCTGCAAGTGGCTTAGTGCTCTCTGGAAGTGAGATTCCGAAAGAAACACTATCTCCTCCAGGAAATGGAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTTCTATCTATAGATCAGAGATCATCAGCACTGCTCCCTCATCCTGGGTGGTGCCAGGGCCAAGTCCTAATGAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAGAACAATGGCAAAAGTCTGTCACTGAAAAACAAGGCTTTGGACTGGGCAATACCGCAACAGCGGAGTTCCTC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GTGTCCCCGCATGGGTGGCACAGATGCCGTGGTCACTAATGTTTCAGGGTCCGTGTCCAGCTCAGGACGCCCAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCTCTGCATCACCAGCCCCCAACGCCAACGCCAATGCAGATGGCACCAAGACCAGCAGGAGCTCGGTGGATACC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ACGCCATCAGTCATCCAGCATGTGGGCCAGCCCTCATCCACGCCTGCCAAGCACGGTGGCAGCACCAGCAGCAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGGAGCCAAAGCCAACCCAGAACCGAGCTTCAAAGCGAGTGAGAATGGCCTCCCGCCAACCTCAATATTTCTAT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTCCAAATGAAGCATTCAGGTCCCCAGCAATTCCCTACCCTAGGAGTTACCTCCCTTACGCAGCACCAGAAGGC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATCGCTCTAAGTCCCCTCTCTTTACATGGCAAAGGACCTGTGTATCCTCACCCAGTTTTGTTACCCAATGGCAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TCTGTTTCCTGGGCACCTTGCCCCAAAGCCTGGCCTGCCTTACGGGCTGCATACGAGCAGGCCAGAATTTGTGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CCTACCAAGATGCCCTGGGCCTGGGCATGGTCCATCCCATGTTGATCCCACACACGCCCATTGAGATCACAAAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GAGGAGAAGCCGGAGAGACGCTCCCGCTCCCATGAGAGAGCCCGTTATGAGGACCCAACCCTCCGTAGCCGGTT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TTCTGAGATGTTGGAAGCTAGCAGCACCAAACTGCATCCAGAAGTCCCCACTGACAAGAACCTGAAGCCAAACT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CTAGCTGGAATCAAGGGAAGACTGGGGTCAAAAGCGACAAACTGGTCTACGTAGACCTTCTCCGAGAAGAAGCA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GACACTAAAACTGATGCAGGGGCACCCAAAGCAGGCCTTGTAGCCGAGAATGTAGGTCAGGACACCGAGGCCAC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CAAGCCCTCAGCTGACCCTGTGATCCAACAACGCCGTGAATTCATCTCCCTCAGAGAGGAGCTGGGCCGAATCA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CTGACTTCCATGAATCTTTCACTTTCAAACAGGCCTCAAGCCAGCCAGTGTTCAGCTTAGGCAAGGATAGTGGT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GCAGCAGGAACCAACAAAGAGAACCTGGGTGTGCAGGTAGCAACTCCATTCTTGGAGACAGCTCTGGGCAGTGA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GGGCCCTGCTGTGACTTTTGGTAAAACCCAAGAGGATCCCAAACCATTTTGTGTGGGCGGTGCCCCTCCAAACA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TGGATGTCACCCCCGCCTATACCAAAGAAGGAACTGATGAGGCCGAATCCAACGATGGCAAAGTTCTGAAACCC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AAGCCATCCAAGCTGGCAAAGAGAATTGCTAACTCGGCAGGTTATGTGGGCGACCGATTCAAGTGTGTCACCAC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CGAACTGTATGCAGATTCCAGTCAGCTCAGCCGAGAGCAGCGGGCATTGCAGATGGAAGGATTACAAGAGGACA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GTATTTTATGTCTACCCGCTGCTTACTGTGAGCGTGCAATGATGCGCTTCTCAGAGTTGGAGATGAAAGAGAGA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GAAGGTAGCCACCCAGCAACCAAAGACTCCGAGGTGTGCAAATTCAGCCCAGCCGACTGGGAAAGGTTGAAAGG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 AAATCAGGAAAAGAAGCCAAAGTCAGTCACCCTGGAAGAGGCCATTGCCGACCAGAATGACAGTGAGAGATGTG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 AGTATAGCACTGGAAACAAACATGATCTCTTTGAAGCCCCAGAGGACAAAGATCTTCCTGTGGAAAAGTATTTC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TTGGAGAGGCCACCTGTGAGTGAGCCACCCAGTGACCAGGGGGTGGTGGACACGCCACACAGCCCCACCCTCCG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GCTAGACAGGAAACGCAAACTGTCAGGTGACAGCACCCACACTGAGACCGCTGTGGAAGAGCTAGCTGAGGACC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CTCTGAAAGCCAAGCGAAGACGGATCTCCAAAGATGACTGGCCTGAGAGGGAAATGACAAACAGTTCCTCTAAC 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CACTTAGAAGACCCACATTGTAATGAGCTGACCAACCTGAAGGTGTGCATTGAATTAACAGGGCTCCATCCTAA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 AAAGCAACGCCACTTGCTGCACCTTAGAGAACGGTGGGAGCAGCAGGTGTCGGCAGCCGAGAGCAAACCTGGCC 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 GGCAAAGCAGGAAGGAAGTGGCCCAGGCTGTTCAGCCTGAGGTCACCTCCCAGGGGACTAACATCACTGAAGAG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 AAGCCTGGCAGGAAAAAGGCAGAGGCCAAAGGCAACAGAGGCTGGTCTGAAGAGTCGCTCAAATCCTGTGACAA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 TGAGCAAGGCTTGCCTGTGCTCTCAGGCTCTCCGCCCATGAAGAGCCTTTCATCCACCAATGCAAGTGGCAAAA 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 AGCAGACTCAGCCAAGCTGCACGCCAGCCTCAAGGCTGCCTGCCAAACAGCAGAAAATTAAAGAAAGCCAGAAG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 ACAGATGTGCTGTGCACAGGGGAAGACGAGGATTGCCAGGCTGCCTCCCCGCTGCAAAAATACACAGACAACAT 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 CGAGAAGCCATCCGGGAAGAGACTGTGCAAAACCAAGCACTTGATACCTCAGGAGTCCAGGAGGAGCTTGCAGA 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 TCACAGGCGACTACTATGTGGAGAACACTGACACTAAGATGACTGTGCGGAGATTCAGAAAACGACCTGAGCCC 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 AGTTCGGACTACGATTTGTCACCACCAGCCAAGCAGGAGCCAAAGCCCTTTGACCGTCTACAACAATTGCTACC 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 GGCCACCCAGGCCACCCAGCTGCCACGCTCAAATTCTCCTCAAGAGACCACCCAGTCTCGCCCCATGCCGCCAG 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 AAGCTCGGAGACTTATTGTCAATAAGAATGCTGGCGAGACCCTCCTGCAGCGGGCTGCCCGGCTAGGCTATGAG 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 GAAGTGGTCTTATATTGCCTGGAGAACAAGGTCTGTGATGTCAATCATCGAGACAATGCTGGCTACTGTGCTCT 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 GCATGAAGCTTGCGCCAGGGGATGGCTCAACATCGTGCGCCACCTCCTTGAATATGGCGCTGATGTCAACTGCA 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 GTGCCCAGGATGGAACCAGGCCTCTGCATGATGCTGTGGAGAATGACCACTTAGAAATTGTACGATTGCTTCTT 4662
Query 1 ------------------------------------------------------ATGACCCACAGTGAACTTAT 20
||||||||||||||||||||
Sbjct 4663 TCCTATGGTGCTGACCCTACTTTGGCCACATACTCAGGGAGAACCATCATGAAAATGACCCACAGTGAACTTAT 4736
Query 21 GGAAAAGTTCTTAACAGATTATTTAAATGACCTCCAGGGTCGCAATGATGATGACGCCAGTGGCACTTGGGACT 94
|||.|||||.||||||||.||||||||||||||.||||||||||.|||.||||||.||||.|||.|||||||.|
Sbjct 4737 GGAGAAGTTTTTAACAGACTATTTAAATGACCTGCAGGGTCGCAGTGAAGATGACACCAGCGGCGCTTGGGAGT 4810
Query 95 TCTATGGCAGCTCTGTTTGTGAACCAGATGATGAAAGTGGCTATGATGTTTTAGCCAACCCCCCAGGACCAGAA 168
||||||||||||||||.||||||||||||||.||||||||.||.||||||||.||.||.|||||||||||||||
Sbjct 4811 TCTATGGCAGCTCTGTGTGTGAACCAGATGACGAAAGTGGGTACGATGTTTTGGCTAATCCCCCAGGACCAGAA 4884
Query 169 GACCAGGATGATGATGACGATGCCTATAGCGATGTGTTTGAATTTGAATTTTCAGAGACCCCCCTCTTACCGTG 242
||||..|||||.||.||.|||.|||||||||||.|||||||.|||||.|||.|.||.|.|.|||||||.|||||
Sbjct 4885 GACCCAGATGAGGAAGAGGATACCTATAGCGATTTGTTTGAGTTTGAGTTTGCTGAAAGCTCCCTCTTGCCGTG 4958
Query 243 TTATAACATCCAAGTATCTGTGGCTCAGGGGCCACGAAACTGGCTACTGCTTTCGGATGTCCTTAAGAAATTGA 316
|||||||||||||||.|||||.|||||||||||||||||||||||.|||||.||.||.||.||.|||||.||||
Sbjct 4959 TTATAACATCCAAGTGTCTGTCGCTCAGGGGCCACGAAACTGGCTTCTGCTCTCAGACGTGCTCAAGAAGTTGA 5032
Query 317 AAATGTCCTCCCGCATATTTCGCTGCAATTTTCCAAACGTGGAAATTGTCACCATTGCAGAGGCAGAATTTTAT 390
|||||||||||||.|||||.||..||||||||||.||..|||||||||||||||||||||||||.||.|||||.
Sbjct 5033 AAATGTCCTCCCGGATATTCCGTAGCAATTTTCCCAATCTGGAAATTGTCACCATTGCAGAGGCGGAGTTTTAC 5106
Query 391 CGGCAGGTTTCTGCAAGTCTCTTGTTCTCTTGCTCCAAAGACCTGGAAGCCTTCAACCCTGAAAGTAAGGAGCT 464
||.|||||.||..||||||||||||||||.|||.||||||||||||||||||||||.||||||||.||||||||
Sbjct 5107 CGACAGGTCTCAACAAGTCTCTTGTTCTCCTGCCCCAAAGACCTGGAAGCCTTCAATCCTGAAAGCAAGGAGCT 5180
Query 465 GTTAGATCTGGTGGAATTCACGAACGAAATTCAGACTCTGCTGGGCTCCTCTGTAGAGTGGCTCCACCCCAGTG 538
|||.|||||||||||||||||.||.||..|.|||||.|||||||||||||||||.||||||||||||||.||||
Sbjct 5181 GTTGGATCTGGTGGAATTCACCAATGAGCTCCAGACACTGCTGGGCTCCTCTGTGGAGTGGCTCCACCCTAGTG 5254
Query 539 A-TCTGGCCTCA-GACAACTACTGG 561
| .|.||| || ||.|||||||||
Sbjct 5255 ACACGGGC--CATGAAAACTACTGG 5277
