Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12121
- Subject:
- XR_429459.3
- Aligned Length:
- 1711
- Identities:
- 953
- Gaps:
- 750
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATAGCCCTTCCCCTAGGCCGGGAACCCCTCCCCCCCACCAGCCCCAGTTCCTTTATCCCTGGGCCCAACCTCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCCGACCCGCGGTCCAGGCCTCGGTCTCTCTCTTCGGCGGCGAGCCGCGGCCCAGACCCCGGCAGAGGACACT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGTCGGCACGTTCTCACCCCTGTCATCTCAGCCCCCTGCCTAGCTCCACCCCAGGCTTGGGAACCCGGCCCCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACGGCCCATTGTCCGCGGGCCCAGCCCCCGCGCTGAACGCACGCTCGCCCTTGCCCCTAACCAGCGCGTCTACC 296
Query 1 -----------------------ATGCAGCCCTCAGGCTGGGCGGCCGCCAGGGAGGCGGCGGGCCGCGACATG 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCGGCAACGCGCAGTGACCTGGGATGCAGCCCTCAGGCTGGGCGGCCGCCAGGGAGGCGGCGGGCCGCGACATG 370
Query 52 CTGGCCGCCGACCTCCGGTGCAGCCTCTTCGCCTCGGCCCTGCAGAGCTACAAGCGCGACTCGGTGCTGCGGCC 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTGGCCGCCGACCTCCGGTGCAGCCTCTTCGCCTCGGCCCTGCAGAGCTACAAGCGCGACTCGGTGCTGCGGCC 444
Query 126 CTTCCCCGCGTCCTACGCCCGCGGCGACTGTAAGGACTTTGAAGCCCTGCTTGCAGATGCCAGCAAGTTACCTA 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTTCCCCGCGTCCTACGCCCGCGGCGACTGTAAGGACTTTGAAGCCCTGCTTGCAGATGCCAGCAAGTTACCTA 518
Query 200 ACCTGAAAGAACTTCTCCAGTCCTCCGGAGACAACCACAAACGGGCCTGGGACCTGGTGAGCTGGATTTTATCC 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ACCTGAAAGAACTTCTCCAGTCCTCCGGAGACAACCACAAACGGGCCTGGGACCTGGTGAGCTGGATTTTATCC 592
Query 274 TCAAAGGTCCTGACAATCCACAGTGCAGGGAAGGCAGAGTTTGAAAAGATCCAAAAGCTGACTGGGGCTCCTCA 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCAAAGGTCCTGACAATCCACAGTGCAGGGAAGGCAGAGTTTGAAAAGATCCAAAAGCTGACTGGGGCTCCTCA 666
Query 348 CACGCCTGTTCCTGCACCGGACTTCCTGTTTGAAATTGAGTACTTTGACCCAGCCAACGCCAAATTTTATGAGA 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CACGCCTGTTCCTGCACCGGACTTCCTGTTTGAAATTGAGTACTTTGACCCAGCCAACGCCAAATTTTATGAGA 740
Query 422 CCAAAGGAGAACGAGACCTAATCTATGCATTTCATGGTAGCCGCCTAGAAAACTTCCATTCCATTATCCACAAT 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCAAAGGAGAACGAGACCTAATCTATGCATTTCATGGTAGCCGCCTAGAAAACTTCCATTCCATTATCCACAAT 814
Query 496 GGCCTGCACTGCCATCTGAACAAGACATCCTTGTTCGGAGAGGGGACCTACCTCACCAGTGACTTAAGCCTGGC 569
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 815 GGCCTGCACTGCCATCTGAACAAGACATCCTTGTTCGGAGAGGGGACCTACCTCACCAGTGACTTGAGCCTGGC 888
Query 570 CCTCATATACAGCCCCCATGGCCATGGGTGGCAGCACAGCCTCCTCGGCCCCATCCTTAGCTGTGTGGCCGTGT 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CCTCATATACAGCCCCCATGGCCATGGGTGGCAGCACAGCCTCCTCGGCCCCATCCTTAGCTGTGTGGCCGTGT 962
Query 644 GTGAGGTCATTGACCATCCGGACGTCAAGTGCCAAACCAAGAAGAAGGATTCCAAGGAGATAGATCGCAGACGA 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GTGAGGTCATTGACCATCCGGACGTCAAGTGCCAAACCAAGAAGAAGGATTCCAAGGAGATAGATCGCAGACGA 1036
Query 718 GCGAGAATCAAACATAGTGAAGGGGGAGACATCCCTCCCAAGTACTTCGTGGTCACCAATAACCAGCTGCTGCG 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GCGAGAATCAAACATAGTGAAGGGGGAGACATCCCTCCCAAGTACTTCGTGGTCACCAATAACCAGCTGCTGCG 1110
Query 792 AGTGAAGTACCTCCTGGTGTATTCACAGAAGCCACCCAAG---AGGGCTCCGAGCCAGCTCTCCTGGTTTTCCA 862
|||||||||||||||||||||||||||||||||||||||| ||||||.||||||||||||||||||||||||
Sbjct 1111 AGTGAAGTACCTCCTGGTGTATTCACAGAAGCCACCCAAGAGCAGGGCTTCGAGCCAGCTCTCCTGGTTTTCCA 1184
Query 863 GCCATTGGTTTACCGTCATGATATCCCTGTATCTGCTGCTGCTGCTCATAG-----------TGA----GTGTC 921
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct 1185 GCCATTGGTTTACCGTCATGATATCCCTGTATCTGCTGCTGCTGCTCATAGCACTGGGAATCTGAAGAGGTGTC 1258
Query 922 ---------ATCAACTCC------------TCT---------GCTTTCCA--ACA-----CTTTTGGAA----- 953
|..||..|| ||| || ||| ||| ||..|||||
Sbjct 1259 TGTGGCCAGAGTAAAGCCAGAGTGTGGCCATCTAAAGGGTGGGC---CCAGGACAAGGGCCTCATGGAAAGGAA 1329
Query 954 -TCGTGCGAAA--AGA---------------------------------------------------------- 966
| ||| |||| |||
Sbjct 1330 CT-GTG-GAAAGTAGAGAGGACCCACCTGCCATGCTGTGAGGACACCCAGGCCACATAGAGAGAGTGAGGCCAC 1401
Query 967 -------------------------------------------------------------------------- 966
Sbjct 1402 ATGTAGGTTTTACAGCCAGAAGCCCCACTGAAAACCAAACCTGCAACCAGCATCAACTGCCAAACATGTACTGA 1475
Query 967 -------------------------------------------------------------------------- 966
Sbjct 1476 AGAGGCTGAGATGATTCCAGCACTTGTGGATGACTGCAACCACATGAGAGACCCAGAGCAAGAGCTACCTAGCT 1549
Query 967 -------------------------------------------------------------------------- 966
Sbjct 1550 GAGCCCAGTTACTCCCAGAATCATGAGAGAACTATGTAATTGATTGTTATTACTATATAAGCCACTAAGTTTAC 1623
Query 967 -------------------------------------------------------------------------- 966
Sbjct 1624 ATATGATATGTTATGCAGCAGTAGACAGCTGGAACAGGAGCCAATAAACACCGAATGAATAAATGTGGATAGGT 1697
Query 967 --------- 966
Sbjct 1698 CTGGTTGAA 1706
