Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12131
- Subject:
- NM_001349745.2
- Aligned Length:
- 1965
- Identities:
- 1049
- Gaps:
- 915
Alignment
Query 1 ATGAAGGTGTTGGGAAGAAGCTTCTTCTGGGTGCTGTTTCCCGTCCTTCCCTGGGCGGTGCAGGCTGTGGAGCA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAAGGTGTTGGGAAGAAGCTTCTTCTGGGTGCTGTTTCCCGTCCTTCCCTGGGCGGTGCAGGCTGTGGAGCA 74
Query 75 CGAGGAGGTGGCGCAGCGTGTGATCAAACTGCACCGCGGGCGAGGGGTGGCTGCCATGCAGAGCCGGCAGTGGG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CGAGGAGGTGGCGCAGCGTGTGATCAAACTGCACCGCGGGCGAGGGGTGGCTGCCATGCAGAGCCGGCAGTGGG 148
Query 149 TCCGGGACAGCTGCAGGAAGCTCTCAGGGCTTCTCCGCCAGAAGAATGCAGTTCTGAACAAACTGAAAACTGCA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCCGGGACAGCTGCAGGAAGCTCTCAGGGCTTCTCCGCCAGAAGAATGCAGTTCTGAACAAACTGAAAACTGCA 222
Query 223 ATTGGAGCAGTGGAGAAAGACGTGGGCCTGTCGGATGAAGAGAAACTGTTTCAGGTGCACACGTTTGAAATTTT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ATTGGAGCAGTGGAGAAAGACGTGGGCCTGTCGGATGAAGAGAAACTGTTTCAGGTGCACACGTTTGAAATTTT 296
Query 297 CCAGAAAGAGCTGAATGAAAGTGAAAATTCCGTTTTCCAAGCTGTCTACGGACTGCAGAGAGCCCTGCAGGGGG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCAGAAAGAGCTGAATGAAAGTGAAAATTCCGTTTTCCAAGCTGTCTACGGACTGCAGAGAGCCCTGCAGGGGG 370
Query 371 ATTACAAAGATGTCGTGAACATGAAGGAGAGCAGCCGGCAGCGCCTGGAGGCCCTGAGAGAGGCTGCAATAAAG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATTACAAAGATGTCGTGAACATGAAGGAGAGCAGCCGGCAGCGCCTGGAGGCCCTGAGAGAGGCTGCAATAAAG 444
Query 445 GAAGAAACAGAATATATGGAACTTCTGGCAGCAGAAAAACATCAAGTTGAAGCCCTTAAAAATATGCAACATCA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAAGAAACAGAATATATGGAACTTCTGGCAGCAGAAAAACATCAAGTTGAAGCCCTTAAAAATATGCAACATCA 518
Query 519 AAACCAAAGTTTATCCATGCTTGACGAGATTCTTGAAGATGTAAGAAAGGCAGCGGATCGTCTGGAGGAAGAGA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AAACCAAAGTTTATCCATGCTTGACGAGATTCTTGAAGATGTAAGAAAGGCAGCGGATCGTCTGGAGGAAGAGA 592
Query 593 TAGAGGAACATGCTTTTGACGACAATAAATCAGTCAAGGGGGTCAATTTTGAGGCAGTTCTGAGGGTGGAGGAA 666
||||||||||||||||||||||||||||||||
Sbjct 593 TAGAGGAACATGCTTTTGACGACAATAAATCA------------------------------------------ 624
Query 667 GAAGAGGCCAATTCTAAGCAAAATATAACAAAACGAGAAGTGGAGGATGACTTGGGTCTTAGCATGCTGATTGA 740
Sbjct 625 -------------------------------------------------------------------------- 624
Query 741 CTCCCAGAACAACCAGTATATTTTGACCAAGCCCAGAGATTCAACCATCCCACGTGCAGATCACCACTTTATAA 814
Sbjct 625 -------------------------------------------------------------------------- 624
Query 815 AGGACATTGTTACCATAGGAATGCTGTCCTTGCCTTGTGGCTGGCTATGTACAGCCATAGGATTGCCTACAATG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 625 --GACATTGTTACCATAGGAATGCTGTCCTTGCCTTGTGGCTGGCTATGTACAGCCATAGGATTGCCTACAATG 696
Query 889 TTTGGTTATATTATTTGTGGTGTACTTCTGGGACCTTCAGGACTAAATAGTATTAAGTCTATTGTGCAAGTGGA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 697 TTTGGTTATATTATTTGTGGTGTACTTCTGGGACCTTCAGGACTAAATAGTATTAAGTCTATTGTGCAAGTGGA 770
Query 963 GACATTAGGAGAATTTGGGGTGTTTTTTACTCTTTTTCTTGTTGGCTTAGAATTTTCTCCAGAAAAGCTAAGAA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 771 GACATTAGGAGAATTTGGGGTGTTTTTTACTCTTTTTCTTGTTGGCTTAGAATTTTCTCCAGAAAAGCTAAGAA 844
Query 1037 AGGTGTGGAAGATTTCCTTACAAGGGCCGTGTTACATGACACTGTTAATGATTGCATTTGGCTTGCTGTGGGGG 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 845 AGGTGTGGAAGATTTCCTTACAAGGGCCGTGTTACATGACACTGTTAATGATTGCATTTGGCTTGCTGTGGGGG 918
Query 1111 CATCTCTTGCGGATCAAACCCACGCAGAGCGTCTTCATTTCCACGTGTCTGTCCTTGTCAAGCACACCCCTCGT 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 919 CATCTCTTGCGGATCAAACCCACGCAGAGCGTCTTCATTTCCACGTGTCTGTCCTTGTCAAGCACACCCCTCGT 992
Query 1185 GTCCAGGTTCCTCATGGGCAGTGCTCGGGGTGACAAAGAAGGCAACA--GA--ACAGC--------CCTC---- 1242
|||||||||||||||||||||||||||||||||||||||||||.||| || ||||| ||||
Sbjct 993 GTCCAGGTTCCTCATGGGCAGTGCTCGGGGTGACAAAGAAGGCGACATTGACTACAGCACCGTGCTCCTCGGCA 1066
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 1067 TGCTGGTGACGCAGGACGTGCAGCTCGGGCTCTTCATGGCCGTCATGCCGACTCTCATACAGGCGGGCGCCAGT 1140
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 1141 GCATCTTCTAGCATTGTCGTGGAAGTTCTCCGAATCCTGGTTTTGATTGGTCAGATTCTTTTTTCACTAGCGGC 1214
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 1215 GGTTTTTCTTTTATGTCTTGTTATAAAGAAGTATCTCATTGGACCCTATTATCGGAAGCTGCACATGGAAAGCA 1288
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 1289 AGGGGAACAAAGAAATCCTGATCTTGGGAATATCTGCCTTTATCTTCTTAATGTTAACGGTCACGGAGCTGCTG 1362
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 1363 GACGTCTCCATGGAGCTGGGCTGTTTCCTGGCTGGAGCGCTCGTCTCCTCTCAGGGCCCCGTGGTCACCGAGGA 1436
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 1437 GATCGCCACCTCCATCGAACCCATCCGCGACTTCCTGGCCATCGTTTTCTTCGCCTCCATAGTTTCTCCTGGCG 1510
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 1511 GCGCTGGTCCTGTCTCTCATTCTGCCGAGGAGCAGCCAGTACATCAAGTGGATCGTCTCTGCGGGGCTTGCCCA 1584
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 1585 GGTCAGCGAGTTTTCCTTTGTCCTGGGGAGCCGGGCGCGAAGAGCGGGCGTCATCTCTCGGGAGGTGTACCTCC 1658
Query 1243 -------------------------------------------------------------------------- 1242
Sbjct 1659 TTATACTGAGTGTGACCACGCTCAGCCTCTTGCTCGCCCCGGTGCTGTGGAGAGCTGCAATCACGAGGTGTGTG 1732
Query 1243 ----------------------------------------- 1242
Sbjct 1733 CCCAGACCGGAGAGACGGTCCAGCCTCTGATGGCTCGGAGA 1773
