Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12139
- Subject:
- NM_017934.7
- Aligned Length:
- 5463
- Identities:
- 2119
- Gaps:
- 3342
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCTTGTGAGAGGAAAGGCCTCTCGGAGCTGCGATCGGAGCTCTACTTCCTCATCGCCCGGTTCCTGGAAGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGACCCTGTCAGCAGGCGGCTCAGGTGCTGATCCGCGAGGTGGCCGAGAAGGAGCTGCTGCCCCGGCGCACCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACTGGACCGGGAAGGAGCATCCCAGGACCTACCAGAATCTGGTGAAGTATTACAGACACTTAGCACCTGATCAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGCTGCAAATATGTCATCGACTAGGACCTCTTCTTGAACAAGAAATTCCTCAAAGTGTTCCTGGAGTACAAAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTATTAGGAGCTGGAAGACAGTCTTTACTACGCACAAATAAAAGCTGCAAGCATGTTGTGTGGAAAGGATCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCTGGCTGCGTTGCACTGTGGAAGACCACCTGAGTCACCAGTTAACTATGGTAGCCCACCCAGCATTGCGGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACTCTGTTTTCAAGGAAGCTGAATGGGAAATACAGACTTGAGCGACTTGTTCCAACTGCAGTGTATCAGCACAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAAAATGCATAAACGAATTCTTGGACACTTGTCATCTGTGTACTGTGTAACTTTTGATCGAACTGGCAGACGGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TATTTACTGGTTCTGATGACTGTCTTGTGAAAATATGGGCAACAGATGATGGGAGGTTGTTAGCTACCTTAAGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGACATGCTGCTGAAATATCAGACATGGCTGTAAACTATGAGAATACCATGATAGCAGCTGGAAGTTGTGATAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AATGATCCGAGTCTGGTGTCTTCGAACCTGTGCACCTTTGGCTGTTCTTCAGGGCCATAGTGCATCTATTACAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CACTACAGTTCTCACCATTGTGCAGTGGCTCAAAGAGATATCTATCTTCTACTGGGGCAGATGGCACTATTTGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTTTGGCTCTGGGATGCTGGAACCCTTAAAATAAACCCAAGACCTGCAAAATTTACAGAGCGCCCTCGGCCTGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGTTCAAATGATCTGTTCTTCTTTTAGTGCTGGTGGAATGTTTCTGGCGACGGGAAGCACAGATCATATTATTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGGTTTATTTTTTTGGATCAGGTCAGCCAGAGAAAATATCAGAATTGGAGTTTCATACTGACAAAGTTGACAGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATCCAGTTTTCCAACACTAGTAACAGGTTTGTAAGTGGCAGTCGTGATGGGACAGCACGTATTTGGCAATTTAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACGAAGAGAGTGGAAGAGCATTTTGTTGGATATGGCTACTCGTCCAGCAGGCCAAAACCTTCAAGGAATAGAAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATAAAATCACAAAAATGAAGGTTACTATGGTAGCTTGGGATCGACATGACAATACAGTTATAACTGCAGTTAAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AACATGACTCTGAAAGTTTGGAATTCTTACACTGGTCAACTAATTCATGTCCTGATGGGTCATGAAGATGAGGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATTTGTTCTTGAACCACACCCGTTCGATCCTAGAGTTCTCTTTTCTGCTGGTCATGATGGAAACGTGATAGTGT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGGATCTGGCAAGAGGAGTCAAAATACGATCTTATTTCAATATGATTGAAGGCCAAGGACATGGCGCAGTATTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GACTGCAAATGCTCTCCTGATGGTCAGCATTTTGCATGCACAGACTCTCATGGACATCTTTTAATTTTTGGCTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGGGTCCAGTAGCAAATATGACAAGATAGCAGATCAGATGTTCTTTCATAGTGATTATCGGCCACTTATTCGTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATGCCAACAATTTTGTATTAGATGAACAGACTCAGCAAGCACCTCATCTTATGCCTCCCCCTTTTTTGGTTGAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GTTGATGGTAACCCTCATCCATCAAGATATCAAAGATTAGTTCCTGGCCGTGAAAATTGCAGGGAGGAGCAACT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CATCCCTCAGATGGGAGTAACTTCCTCAGGACTGAATCAAGTTTTAAGTCAGCAAGCAAACCAGGAGATCAGCC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CACTGGACAGCATGATTCAAAGACTACAACAGGAGCAAGACCTGAGACGTTCTGGTGAAGCAGTTATCAGTAAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ACCAGCCGTTTAAGTAGAGGCTCCATAAGTTCTACCTCAGAGGTTCATTCACCACCAAACGTAGGACTAAGACG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TAGTGGACAAATTGAAGGTGTACGGCAAATGCACAGCAACGCACCAAGAAGTGAAATAGCCACAGAGCGGGATC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGGTAGCTTGGAGTCGAAGGGTGGTAGTACCCGAGCTATCAGCTGGTGTAGCCAGTAGGCAAGAAGAATGGAGA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ACTGCAAAGGGAGAAGAAGAAATAAAGACTTACAGGTCAGAAGAGAAAAGAAAACACTTAACTGTTCCAAAAGA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GAATAAAATACCCACTGTCTCAAAGAATCATGCTCATGAGCATTTCCTGGATCTTGGAGAATCCAAAAAGCAAC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGACAAATCAACACAATTATCGTACAAGATCTGCATTGGAAGAGACTCCTAGACCCTCAGAAGAGATAGAAAAT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GGCAGTAGTTCTTCAGATGAAGGCGAAGTAGTTGCTGTCAGTGGTGGAACATCCGAAGAAGAAGAGAGAGCATG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GCACAGTGATGGCAGTTCTAGTGACTACTCCAGTGATTACTCTGACTGGACAGCAGATGCAGGAATTAATCTGC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AGCCACCAAAGAAAGTTCCTAAGAATAAAACCAAGAAAGCAGAAAGCAGTTCAGATGAAGAAGAAGAATCTGAA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AAACAGAAGCAAAAACAGATTAAAAAGGAAAAGAAAAAAGTAAATGAAGAAAAAGATGGACCAATATCACCAAA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GAAAAAGAAGCCCAAAGAAAGAAAACAAAAGAGATTGGCTGTGGGAGAACTAACTGAAAATGGTTTGACATTAG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AAGAATGGTTGCCATCAACATGGATTACAGATACCATTCCCCGAAGATGTCCATTTGTGCCACAGATGGGTGAT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GAGGTTTATTATTTCCGACAAGGACATGAAGCCTATGTCGAAATGGCCCGGAAAAATAAAATATATAGTATCAA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TCCCAAAAAACAACCATGGCATAAAATGGAGCTACGGGAACAAGAACTTATGAAAATAGTTGGCATAAAGTATG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AAGTGGGATTACCTACCCTTTGCTGCCTTAAACTTGCTTTTCTAGATCCTGATACTGGTAAACTGACTGGCGGA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TCATTTACCATGAAATACCATGATATGCCTGACGTTATAGATTTCCTAGTCTTGAGACAACAATTTGATGATGC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 AAAATACAGGCGATGGAATATAGGTGACCGCTTCAGGTCTGTCATAGATGATGCCTGGTGGTTTGGAACAATCG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 AAAGCCAGGAACCTCTTCAACTTGAGTACCCTGATAGTCTGTTTCAATGCTACAATGTTTGCTGGGACAATGGA 3330
Query 1 ------------ATGAGTCCTTGGGATATGGAGCTTATACCTAATAATGCTGTATTTCCTGAAGAACTAGGTAC 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 GATACAGAAAAGATGAGTCCTTGGGATATGGAGCTTATACCTAATAATGCTGTATTTCCTGAAGAACTAGGTAC 3404
Query 63 CAGTGTTCCTTTAACTGATGGTGAGTGCAGATCACTAATCTATAAACCTCTTGATGGAGAATGGGGTACCAATC 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 CAGTGTTCCTTTAACTGATGGTGAGTGCAGATCACTAATCTATAAACCTCTTGATGGAGAATGGGGTACCAATC 3478
Query 137 CCAGGGATGAAGAATGTGAAAGAATTGTGGCAGGAATAAACCAGTTGATGACACTAGATATTGCCTCAGCATTT 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 CCAGGGATGAAGAATGTGAAAGAATTGTGGCAGGAATAAACCAGTTGATGACACTAGATATTGCCTCAGCATTT 3552
Query 211 GTGGCCCCCGTGGATCTGCAAGCCTATCCCATGTATTGCACAGTAGTGGCATATCCAACGGATCTAAGTACAAT 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 GTGGCCCCCGTGGATCTGCAAGCCTATCCCATGTATTGCACAGTAGTGGCATATCCAACGGATCTAAGTACAAT 3626
Query 285 TAAACAAAGACTGGAAAACAGGTTTTACAGGCGGGTTTCTTCCCTAATGTGGGAAGTTCGATATATAGAGCATA 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 TAAACAAAGACTGGAAAACAGGTTTTACAGGCGGGTTTCTTCCCTAATGTGGGAAGTTCGATATATAGAGCATA 3700
Query 359 ATACACGAACATTTAATGAGCCTGGAAGCCCTATTGTGAAATCTGCTAAATTCGTGACTGATCTTCTTCTACAT 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701 ATACACGAACATTTAATGAGCCTGGAAGCCCTATTGTGAAATCTGCTAAATTCGTGACTGATCTTCTTCTACAT 3774
Query 433 TTTATAAAGGATCAGACTTGTTATAACATAATTCCACTTTATAATTCAATGAAGAAGAAAGTTTTGTCTGATTC 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3775 TTTATAAAGGATCAGACTTGTTATAACATAATTCCACTTTATAATTCAATGAAGAAGAAAGTTTTGTCTGATTC 3848
Query 507 TGAGGATGAAGAGAAAGATGCTGATGTGCCAGGAACTTCTACTCGAAAAAGGAAGGACCATCAGCCTAGAAGAA 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3849 TGAGGATGAAGAGAAAGATGCTGATGTGCCAGGAACTTCTACTCGAAAAAGGAAGGACCATCAGCCTAGAAGAA 3922
Query 581 GATTACGTAATAGAGCCCAGTCTTACGATATTCAAGCATGGAAGAAACAGTGTGAAGAATTGTTAAATCTCATA 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3923 GATTACGTAATAGAGCCCAGTCTTACGATATTCAAGCATGGAAGAAACAGTGTGAAGAATTGTTAAATCTCATA 3996
Query 655 TTTCAATGTGAAGATTCAGAGCCTTTCCGTCAGCCGGTAGATCTCCTTGAATATCCAGACTACAGAGACATCAT 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3997 TTTCAATGTGAAGATTCAGAGCCTTTCCGTCAGCCGGTAGATCTCCTTGAATATCCAGACTACAGAGACATCAT 4070
Query 729 TGACACTCCAATGGATTTTGCTACCGTTAGAGAAACTTTAGAGGCTGGGAATTATGAGTCACCAATGGAGTTAT 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4071 TGACACTCCAATGGATTTTGCTACCGTTAGAGAAACTTTAGAGGCTGGGAATTATGAGTCACCAATGGAGTTAT 4144
Query 803 GTAAAGATGTCAGACTTATTTTCAGTAATTCCAAAGCATATACACCAAGCAAAAGATCAAGGATTTACAGCATG 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4145 GTAAAGATGTCAGACTTATTTTCAGTAATTCCAAAGCATATACACCAAGCAAAAGATCAAGGATTTACAGCATG 4218
Query 877 AGTTTGCGCTTGTCTGCATTCTTTGAAGAACACATTAGTTCAGTTTTATCAGATTATAAATCTGCTCTTCGTTT 950
|||||||||.|||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4219 AGTTTGCGCCTGTCTGCTTTCTTTGAAGAACACATTAGTTCAGTTTTATCAGATTATAAATCTGCTCTTCGTTT 4292
Query 951 TCATAAAAGAAATACCATAACCAAAAGGAGGAAGAAAAGAAACAGAAGCAGCTCTGTTTCCAGTAGTGCTGCAT 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4293 TCATAAAAGAAATACCATAACCAAAAGGAGGAAGAAAAGAAACAGAAGCAGCTCTGTTTCCAGTAGTGCTGCAT 4366
Query 1025 CAAGCCCTGAAAGGAAAAAAAGGATCTTAAAACCCCAGCTAAAATCAGAAAGCTCTACCTCTGCATTCTCTACA 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4367 CAAGCCCTGAAAGGAAAAAAAGGATCTTAAAACCCCAGCTAAAATCAGAAAGCTCTACCTCTGCATTCTCTACA 4440
Query 1099 CCTACACGATCAATACCGCCAAGACACAATGCTGCTCAGATAAACGGTAAAACAGAATCTAGTTCTGTGGTTCG 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4441 CCTACACGATCAATACCGCCAAGACACAATGCTGCTCAGATAAACGGTAAAACAGAATCTAGTTCTGTGGTTCG 4514
Query 1173 AACCAGAAGCAACCGAGTGGTTGTAGATCCAGTTGTCACTGAGCAACCATCTACTTCTTCAGCTGCAAAGACTT 1246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4515 AACCAGAAGCAACCGAGTGGTTGTAGATCCAGTTGTCACTGAGCAACCATCTACTTCTTCAGCTGCAAAGACTT 4588
Query 1247 TTATTACAAAAGCTAATGCATCTGCAATACCAGGGAAAACAATACTAGAGAATTCTGTGAAACATTCCAAAGCT 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4589 TTATTACAAAAGCTAATGCATCTGCAATACCAGGGAAAACAATACTAGAGAATTCTGTGAAACATTCCAAAGCT 4662
Query 1321 TTGAATACTCTTTCCAGTCCTGGTCAATCCAGTTTTAGTCATGGCACTAGGAATAATTCTGCAAAAGAAAACAT 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4663 TTGAATACTCTTTCCAGTCCTGGTCAATCCAGTTTTAGTCATGGCACTAGGAATAATTCTGCAAAAGAAAACAT 4736
Query 1395 GGAAAAGGAAAAGCCAGTCAAACGTAAAATGAAGTCATCTGTACTCCCAAAGGCGTCCACTCTTTCAAAGTCAT 1468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4737 GGAAAAGGAAAAGCCAGTCAAACGTAAAATGAAGTCATCTGTACTCCCAAAGGCGTCCACTCTTTCAAAGTCAT 4810
Query 1469 CAGCTGTCATTGAGCAAGGAGATTGTAAGAACAACGCTCTTGTACCAGGAACCATTCAAGTAAATGGCCATGGA 1542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4811 CAGCTGTCATTGAGCAAGGAGATTGTAAGAACAACGCTCTTGTACCAGGAACCATTCAAGTAAATGGCCATGGA 4884
Query 1543 GGACAGCCATCAAAACTTGTGAAGAGGGGACCTGGAAGGAAACCTAAAGTAGAAGTTAATACCAATAGTGGTGA 1616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4885 GGACAGCCATCAAAACTTGTGAAGAGGGGACCTGGAAGGAAACCTAAAGTAGAAGTTAATACCAATAGTGGTGA 4958
Query 1617 AATTATACACAAGAAAAGGGGTAGAAAGCCCAAAAAGCTACAGTATGCAAAGCCAGAAGATTTAGAGCAAAATA 1690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4959 AATTATACACAAGAAAAGGGGTAGAAAGCCCAAAAAGCTACAGTATGCAAAGCCAGAAGATTTAGAGCAAAATA 5032
Query 1691 ATGTGCATCCCATCAGAGATGAAGTACTTCCTTCTTCAACATGCAATTTTCTTTCTGAAACTAATAATGTAAAG 1764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5033 ATGTGCATCCCATCAGAGATGAAGTACTTCCTTCTTCAACATGCAATTTTCTTTCTGAAACTAATAATGTAAAG 5106
Query 1765 GAAGATTTGTTACAGAAAAAGAATCGTGGAGGTAGGAAGCCCAAAAGGAAGATGAAGACACAAAAATTAGATGC 1838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5107 GAAGATTTGTTACAGAAAAAGAATCGTGGAGGTAGGAAGCCCAAAAGGAAGATGAAGACACAAAAATTAGATGC 5180
Query 1839 AGATCTCCTAGTCCCTGCAAGTGTCAAAGTGTTAAGGAGAAGTAACCGAAAAAAGATAGATGATCCTATAGATG 1912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5181 AGATCTCCTAGTCCCTGCAAGTGTCAAAGTGTTAAGGAGAAGTAACCGAAAAAAGATAGATGATCCTATAGATG 5254
Query 1913 AGGAAGAAGAGTTTGAAGAACTCAAAGGCTCTGAACCCCACATGAGAACTAGAAATCAAGGTCGAAGGACAGCT 1986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5255 AGGAAGAAGAGTTTGAAGAACTCAAAGGCTCTGAACCCCACATGAGAACTAGAAATCAAGGTCGAAGGACAGCT 5328
Query 1987 TTCTATAATGAGGATGACTCTGAAGAGGAGCAAAGGCAGCTGTTGTTCGAAGACACCTCTTTAACTTTTGGAAC 2060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5329 TTCTATAATGAGGATGACTCTGAAGAGGAGCAAAGGCAGCTGTTGTTCGAAGACACCTCTTTAACTTTTGGAAC 5402
Query 2061 TTCTAGTAGAGGACGAGTCCGAAAGTTGACTGAAAAAGCAAAAGCTAATTTAATTGGTTGG 2121
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5403 TTCTAGTAGAGGACGAGTCCGAAAGTTGACTGAAAAAGCAAAAGCTAATTTAATTGGTTGG 5463
