Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12139
- Subject:
- XM_017010989.2
- Aligned Length:
- 3798
- Identities:
- 2119
- Gaps:
- 1677
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTTCTTTCATAGTGATTATCGGCCACTTATTCGTGATGCCAACAATTTTGTATTAGATGAACAGACTCAGCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCACCTCATCTTATGCCTCCCCCTTTTTTGGTTGATGTTGATGGTAACCCTCATCCATCAAGATATCAAAGAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TAGTTCCTGGCCGTGAAAATTGCAGGGAGGAGCAACTCATCCCTCAGATGGGAGTAACTTCCTCAGGACTGAAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAAGTTTTAAGTCAGCAAGCAAACCAGGAGATCAGCCCACTGGACAGCATGATTCAAAGACTACAACAGGAGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGACCTGAGACGTTCTGGTGAAGCAGTTATCAGTAATACCAGCCGTTTAAGTAGAGGCTCCATAAGTTCTACCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGAGGTTCATTCACCACCAAACGTAGGACTAAGACGTAGTGGACAAATTGAAGGTGTACGGCAAATGCACAGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACGCACCAAGAAGTGAAATAGCCACAGAGCGGGATCTGGTAGCTTGGAGTCGAAGGGTGGTAGTACCCGAGCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATCAGCTGGTGTAGCCAGTAGGCAAGAAGAATGGAGAACTGCAAAGGGAGAAGAAGAAATAAAGACTTACAGGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGAAGAGAAAAGAAAACACTTAACTGTTCCAAAAGAGAATAAAATACCCACTGTCTCAAAGAATCATGCTCAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAGCATTTCCTGGATCTTGGAGAATCCAAAAAGCAACAGACAAATCAACACAATTATCGTACAAGATCTGCATT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGAAGAGACTCCTAGACCCTCAGAAGAGATAGAAAATGGCAGTAGTTCTTCAGATGAAGGCGAAGTAGTTGCTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCAGTGGTGGAACATCCGAAGAAGAAGAGAGAGCATGGCACAGTGATGGCAGTTCTAGTGACTACTCCAGTGAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TACTCTGACTGGACAGCAGATGCAGGAATTAATCTGCAGCCACCAAAGAAAGTTCCTAAGAATAAAACCAAGAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGCAGAAAGCAGTTCAGATGAAGAAGAAGAATCTGAAAAACAGAAGCAAAAACAGATTAAAAAGGAAAAGAAAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAGTAAATGAAGAAAAAGATGGACCAATATCACCAAAGAAAAAGAAGCCCAAAGAAAGAAAACAAAAGAGATTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCTGTGGGAGAACTAACTGAAAATGGTTTGACATTAGAAGAATGGTTGCCATCAACATGGATTACAGATACCAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCCCCGAAGATGTCCATTTGTGCCACAGATGGGTGATGAGGTTTATTATTTCCGACAAGGACATGAAGCCTATG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCGAAATGGCCCGGAAAAATAAAATATATAGTATCAATCCCAAAAAACAACCATGGCATAAAATGGAGCTACGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAACAAGAACTTATGAAAATAGTTGGCATAAAGTATGAAGTGGGATTACCTACCCTTTGCTGCCTTAAACTTGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTTTCTAGATCCTGATACTGGTAAACTGACTGGCGGATCATTTACCATGAAATACCATGATATGCCTGACGTTA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TAGATTTCCTAGTCTTGAGACAACAATTTGATGATGCAAAATACAGGCGATGGAATATAGGTGACCGCTTCAGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TCTGTCATAGATGATGCCTGGTGGTTTGGAACAATCGAAAGCCAGGAACCTCTTCAACTTGAGTACCCTGATAG 1628
Query 1 -------------------------------------------------ATGAGTCCTTGGGATATGGAGCTTA 25
|||||||||||||||||||||||||
Sbjct 1629 TCTGTTTCAATGCTACAATGTTTGCTGGGACAATGGAGATACAGAAAAGATGAGTCCTTGGGATATGGAGCTTA 1702
Query 26 TACCTAATAATGCTGTATTTCCTGAAGAACTAGGTACCAGTGTTCCTTTAACTGATGGTGAGTGCAGATCACTA 99
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TACCTAATAATGCTGTATTTCCTGAAGAACTAGGTACCAGTGTTCCTTTAACTGATGGTGAGTGCAGATCACTA 1776
Query 100 ATCTATAAACCTCTTGATGGAGAATGGGGTACCAATCCCAGGGATGAAGAATGTGAAAGAATTGTGGCAGGAAT 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 ATCTATAAACCTCTTGATGGAGAATGGGGTACCAATCCCAGGGATGAAGAATGTGAAAGAATTGTGGCAGGAAT 1850
Query 174 AAACCAGTTGATGACACTAGATATTGCCTCAGCATTTGTGGCCCCCGTGGATCTGCAAGCCTATCCCATGTATT 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 AAACCAGTTGATGACACTAGATATTGCCTCAGCATTTGTGGCCCCCGTGGATCTGCAAGCCTATCCCATGTATT 1924
Query 248 GCACAGTAGTGGCATATCCAACGGATCTAAGTACAATTAAACAAAGACTGGAAAACAGGTTTTACAGGCGGGTT 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 GCACAGTAGTGGCATATCCAACGGATCTAAGTACAATTAAACAAAGACTGGAAAACAGGTTTTACAGGCGGGTT 1998
Query 322 TCTTCCCTAATGTGGGAAGTTCGATATATAGAGCATAATACACGAACATTTAATGAGCCTGGAAGCCCTATTGT 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 TCTTCCCTAATGTGGGAAGTTCGATATATAGAGCATAATACACGAACATTTAATGAGCCTGGAAGCCCTATTGT 2072
Query 396 GAAATCTGCTAAATTCGTGACTGATCTTCTTCTACATTTTATAAAGGATCAGACTTGTTATAACATAATTCCAC 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GAAATCTGCTAAATTCGTGACTGATCTTCTTCTACATTTTATAAAGGATCAGACTTGTTATAACATAATTCCAC 2146
Query 470 TTTATAATTCAATGAAGAAGAAAGTTTTGTCTGATTCTGAGGATGAAGAGAAAGATGCTGATGTGCCAGGAACT 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 TTTATAATTCAATGAAGAAGAAAGTTTTGTCTGATTCTGAGGATGAAGAGAAAGATGCTGATGTGCCAGGAACT 2220
Query 544 TCTACTCGAAAAAGGAAGGACCATCAGCCTAGAAGAAGATTACGTAATAGAGCCCAGTCTTACGATATTCAAGC 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 TCTACTCGAAAAAGGAAGGACCATCAGCCTAGAAGAAGATTACGTAATAGAGCCCAGTCTTACGATATTCAAGC 2294
Query 618 ATGGAAGAAACAGTGTGAAGAATTGTTAAATCTCATATTTCAATGTGAAGATTCAGAGCCTTTCCGTCAGCCGG 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 ATGGAAGAAACAGTGTGAAGAATTGTTAAATCTCATATTTCAATGTGAAGATTCAGAGCCTTTCCGTCAGCCGG 2368
Query 692 TAGATCTCCTTGAATATCCAGACTACAGAGACATCATTGACACTCCAATGGATTTTGCTACCGTTAGAGAAACT 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TAGATCTCCTTGAATATCCAGACTACAGAGACATCATTGACACTCCAATGGATTTTGCTACCGTTAGAGAAACT 2442
Query 766 TTAGAGGCTGGGAATTATGAGTCACCAATGGAGTTATGTAAAGATGTCAGACTTATTTTCAGTAATTCCAAAGC 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 TTAGAGGCTGGGAATTATGAGTCACCAATGGAGTTATGTAAAGATGTCAGACTTATTTTCAGTAATTCCAAAGC 2516
Query 840 ATATACACCAAGCAAAAGATCAAGGATTTACAGCATGAGTTTGCGCTTGTCTGCATTCTTTGAAGAACACATTA 913
||||||||||||||||||||||||||||||||||||||||||||||.|||||||.|||||||||||||||||||
Sbjct 2517 ATATACACCAAGCAAAAGATCAAGGATTTACAGCATGAGTTTGCGCCTGTCTGCTTTCTTTGAAGAACACATTA 2590
Query 914 GTTCAGTTTTATCAGATTATAAATCTGCTCTTCGTTTTCATAAAAGAAATACCATAACCAAAAGGAGGAAGAAA 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 GTTCAGTTTTATCAGATTATAAATCTGCTCTTCGTTTTCATAAAAGAAATACCATAACCAAAAGGAGGAAGAAA 2664
Query 988 AGAAACAGAAGCAGCTCTGTTTCCAGTAGTGCTGCATCAAGCCCTGAAAGGAAAAAAAGGATCTTAAAACCCCA 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 AGAAACAGAAGCAGCTCTGTTTCCAGTAGTGCTGCATCAAGCCCTGAAAGGAAAAAAAGGATCTTAAAACCCCA 2738
Query 1062 GCTAAAATCAGAAAGCTCTACCTCTGCATTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCTC 1135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 GCTAAAATCAGAAAGCTCTACCTCTGCATTCTCTACACCTACACGATCAATACCGCCAAGACACAATGCTGCTC 2812
Query 1136 AGATAAACGGTAAAACAGAATCTAGTTCTGTGGTTCGAACCAGAAGCAACCGAGTGGTTGTAGATCCAGTTGTC 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 AGATAAACGGTAAAACAGAATCTAGTTCTGTGGTTCGAACCAGAAGCAACCGAGTGGTTGTAGATCCAGTTGTC 2886
Query 1210 ACTGAGCAACCATCTACTTCTTCAGCTGCAAAGACTTTTATTACAAAAGCTAATGCATCTGCAATACCAGGGAA 1283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 ACTGAGCAACCATCTACTTCTTCAGCTGCAAAGACTTTTATTACAAAAGCTAATGCATCTGCAATACCAGGGAA 2960
Query 1284 AACAATACTAGAGAATTCTGTGAAACATTCCAAAGCTTTGAATACTCTTTCCAGTCCTGGTCAATCCAGTTTTA 1357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 AACAATACTAGAGAATTCTGTGAAACATTCCAAAGCTTTGAATACTCTTTCCAGTCCTGGTCAATCCAGTTTTA 3034
Query 1358 GTCATGGCACTAGGAATAATTCTGCAAAAGAAAACATGGAAAAGGAAAAGCCAGTCAAACGTAAAATGAAGTCA 1431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 GTCATGGCACTAGGAATAATTCTGCAAAAGAAAACATGGAAAAGGAAAAGCCAGTCAAACGTAAAATGAAGTCA 3108
Query 1432 TCTGTACTCCCAAAGGCGTCCACTCTTTCAAAGTCATCAGCTGTCATTGAGCAAGGAGATTGTAAGAACAACGC 1505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 TCTGTACTCCCAAAGGCGTCCACTCTTTCAAAGTCATCAGCTGTCATTGAGCAAGGAGATTGTAAGAACAACGC 3182
Query 1506 TCTTGTACCAGGAACCATTCAAGTAAATGGCCATGGAGGACAGCCATCAAAACTTGTGAAGAGGGGACCTGGAA 1579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 TCTTGTACCAGGAACCATTCAAGTAAATGGCCATGGAGGACAGCCATCAAAACTTGTGAAGAGGGGACCTGGAA 3256
Query 1580 GGAAACCTAAAGTAGAAGTTAATACCAATAGTGGTGAAATTATACACAAGAAAAGGGGTAGAAAGCCCAAAAAG 1653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 GGAAACCTAAAGTAGAAGTTAATACCAATAGTGGTGAAATTATACACAAGAAAAGGGGTAGAAAGCCCAAAAAG 3330
Query 1654 CTACAGTATGCAAAGCCAGAAGATTTAGAGCAAAATAATGTGCATCCCATCAGAGATGAAGTACTTCCTTCTTC 1727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 CTACAGTATGCAAAGCCAGAAGATTTAGAGCAAAATAATGTGCATCCCATCAGAGATGAAGTACTTCCTTCTTC 3404
Query 1728 AACATGCAATTTTCTTTCTGAAACTAATAATGTAAAGGAAGATTTGTTACAGAAAAAGAATCGTGGAGGTAGGA 1801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 AACATGCAATTTTCTTTCTGAAACTAATAATGTAAAGGAAGATTTGTTACAGAAAAAGAATCGTGGAGGTAGGA 3478
Query 1802 AGCCCAAAAGGAAGATGAAGACACAAAAATTAGATGCAGATCTCCTAGTCCCTGCAAGTGTCAAAGTGTTAAGG 1875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 AGCCCAAAAGGAAGATGAAGACACAAAAATTAGATGCAGATCTCCTAGTCCCTGCAAGTGTCAAAGTGTTAAGG 3552
Query 1876 AGAAGTAACCGAAAAAAGATAGATGATCCTATAGATGAGGAAGAAGAGTTTGAAGAACTCAAAGGCTCTGAACC 1949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 AGAAGTAACCGAAAAAAGATAGATGATCCTATAGATGAGGAAGAAGAGTTTGAAGAACTCAAAGGCTCTGAACC 3626
Query 1950 CCACATGAGAACTAGAAATCAAGGTCGAAGGACAGCTTTCTATAATGAGGATGACTCTGAAGAGGAGCAAAGGC 2023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 CCACATGAGAACTAGAAATCAAGGTCGAAGGACAGCTTTCTATAATGAGGATGACTCTGAAGAGGAGCAAAGGC 3700
Query 2024 AGCTGTTGTTCGAAGACACCTCTTTAACTTTTGGAACTTCTAGTAGAGGACGAGTCCGAAAGTTGACTGAAAAA 2097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701 AGCTGTTGTTCGAAGACACCTCTTTAACTTTTGGAACTTCTAGTAGAGGACGAGTCCGAAAGTTGACTGAAAAA 3774
Query 2098 GCAAAAGCTAATTTAATTGGTTGG 2121
||||||||||||||||||||||||
Sbjct 3775 GCAAAAGCTAATTTAATTGGTTGG 3798
