Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12140
- Subject:
- NM_133758.3
- Aligned Length:
- 4068
- Identities:
- 425
- Gaps:
- 3597
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGTGCCCGGCGAGGAGAACCAACTGGTCCCGAAGGAGATAGAAAATGCTGCTGAAGAACCTAGAGTCTTATG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TATAATACAAGACACTACTAACTCGAAGACAGTGAGTGAACGGATCACATTAAATTTACCAGCATCTACCCCAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCCGAAAGCTCTTTGAAGATGTGGCCAACAAAGTAGGCTACATAAATGGAACCTTTGATTTGACCAGGGAAAAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGAGTCACTACTGCTGACATGGCACCACTGGATCACACCAGTGACAAGTCTCTTCTTGATGCTAATTTTGAGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGGAAAGAAGAACTTTCTGCATTTGACAGATAAAGATGGTGAACCGCCTCAGATGTTGTTGGAGGACTCCAATA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACGTGGATGACAGCGTGCATGACAGGTTCATAGGTCCACTGCCAAGAGAAGGTTCTGTGGCCTCTACCAATGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TATGTCAGCCAGAACTACTCCTATTCATCAATTTTGAACAAGTCAGAAACTGGTTATGTGGGATTAGTAAACCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGCGATGACGTGCTATTTGAATAGCCTTTTGCAAACACTTTTTATGACTCCTGAATTTAGGAATGCATTATATA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGTGGGAATTTGAAGACTCTGAAGAAGATCCTGTAACGAGTATCCCATACCAGCTTCAAAGGCTTTTTGTTTTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTACAAACCAGCAAAAAGAGAGCAATTGAGACCACAGATGTTACAAGGAGCTTTGGATGGGATAGCAGTGAGGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTGGCAACAGCATGATGTACAAGAACTGTGCCGTGTTATGTTTGATGCTTTGGAACAGAAATGGAAGCAAACAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AACAGGCTGATCTTATAAATGAGCTGTACCAAGGCAAGCTGAAAGATTATGTGAGGTGTCTGGAATGCGGTTAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GAAGGCTGGAGAATTGACACGTATCTTGATATTCCACTGGTCATCCGACCTTATGGGTCCAGCCAAGCGTTTGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TAGTGTGGAAGAAGCGTTGCATGCATTTATTCAACCAGAGATCTTGGATGGCCCAAATCAATATTTTTGTGAAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTTGTAAGAAGAAGTGTGATGCTCGGAAGGGCCTTCGGTTTTTGCATTTCCCCTATCTGCTGACCTTACAGTTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAAAGGTTTGATTTTGATTATACAACCATGCATAGAATTAAACTGAATGATCGAATGTCATTTCCGGAGGAGCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGATATGAGCACATTTATTGATATTGAAGATGAGAAATCTCCTCAGACTGAAAGTTGCACTGATAGTGGAGCAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AAAATGAAGGCAGTTGCCACAGCGACCAGATGAGTAATGATTTCTCCACGGATGATGCTGTTGATGAAGGGATA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGCCTGGAGAGCAGTAGTGGGAGTGAGAAGATTTCAAAACCTGGCCTGGAAAAGAACTCCCTGATGTATGAGCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTTCTCAGTGATGGTGCATTCAGGGAGTGCTGCTGGAGGACACTATTATGCTTGCATAAAGTCTTTCAGTGACG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATCAATGGTACAGTTTCAATGACCAACATGTGAGCAGGATAACACAAGAAGACATTAAGAAGACACATGGTGGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TCTTCAGGAAGCAGAGGCTACTACTCCAGTGCTTTTGCAAGCTCAACAAATGCATATATGCTGATATACAGACT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GAAGGATCCAACAAGAAATGCAAAGTTTCTAGAAGTGGACGAGTACCCAGAACACATTAAGAATCTGGTGCAGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGGAGAGAGAGCTGGAAGAGCAGGAAAAGAGGCAACGAGAGATTGAACGCAACACGTGCAAGATAAAATTATTT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGTTTGCATCCTGTGAAACAAGTAATGATGGAAAACAAGCTGGAGGTTCATAAGGATAAGACGCTAAAGGAAGC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CGTTGAAATGGCTTATAAGATGATGGATTTAGAAGATGTGATTCCCTTGGATTGCTGTCGCCTGGTAAAATATG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ACGAGTTTCATGATTACCTGGAACGATCGTATGAGGGAGAAGAAGATACACCAATGGGGTTGCTTCTAGGAGGA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GTCAAGTCCACATACATGTTTGATCTGCTGTTGGAAACGAGAAAGCCTGATCAAATTTTTCAGTCTTACAAACC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TGGAGAAGTGATGGTGAAAGTTCATGTTGTTGATCTGAAAGCAGAGACTGTCGCTGCTCCTGTAACAGTGCGTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CGTATTTAAATCAGACAGTTACAGAGTTTAAACAGCTGATCTCAAAGGCCACGCACTTACCTGCAGACTCCATG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGGATAGTGCTGGAGCGCTGCTACAATGACCTGCGCCTTCTCAGCATGCCCAGCAAGACCCTGAAGGCTGAGGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CTTCTTCAGAAGTAACAAGGTGTTTGTTGAAAGCTCTGAGACAGTGGATCACCAGGCAGCCTTTACAGACTCCC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ACTTGTGGAAACTCCTGGATCGACATGCAAATACAATCCGGTTATTTGTTTTGCTGCCTGAACAATCTCCAGGA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TCATATTCGAAAAGGACAGCATACCAGAAAGCTGGAGGTGATTCTGGTAATGTGGACGATGATTGTGAAAGAGT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CAAAGGACCTGCAGGGAATTTAAAGTCTGTGGATGCTATTCTAGAAGAGAGCACTGAAAAACTGAAAAGCTTGT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CACTGCAGCAGCAGCAGCAAGATGGGGACAACGGAGACAGCAGCAAAAGCACTGAGACAAGTGACTTTGAAAAT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ATTGAATCCCCTCTCAATGAGAGGGGCTCTTCCACCTCTGTGGATAATCGAGAACTTGAACAGCACATTCAGAC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTCTGACCCAGAAAACTTTCAGTCTGAGGAACGCTCGGACTCAGATGTGAATAATGACCGGAGTACAAGTTCGG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TAGACAGTGATATTCTTAGCTCCAGTCACAGCAGTGACACTTTGTGCAATGCAGACAGCGCTCAGATTCCTCTG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GCCAATGGACTTGACTCTCACAGTATCACAAGTAGTAGAAGAACTAAAGCAAACGAGGGGAAAAAGGAGACCTG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GGACACAGCTGAAGAAGACTCTGGGACTGACAGTGAATATGACGAGAGTGGCAAGAGCAGGGGGGACATGCAGT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ACATGTACTTCAAAGCTGACCCCTACACTGCGGATGAAGGCTCTGGGGAAGGACACAAATGGTTGATGGTGCAT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GTTGATAAGAGAATCACCCTGGCAGCTTTCAAACAGCATTTAGAACCTTTTGTTGGAGTCCTCTCCTCTCACTT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CAAGGTTTTTCGAGTGTACACCAGCAATCAAGAGTTTGAGACCGTCCGGTTGAATGAGACCCTTTCATCATTTT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CAGATGACAATAAGATCACAATCCGACTGGGGAGAGCACTGAAGAAGGGAGAGTACAGAGTTAAAGTGTGCCAG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CTCTTAGTCAATGAGCAAGAGCCATGCAAGTTTCTGCTAGACGCTGTGTTTGCTAAAGGCATGACTGTGCGGCA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 ATCAAAAGAGGAGCTGATTCCTCAACTCAGGGAGCAGTGTGGCTTAGACCTCAGCATCGACAGGTTTCGTCTAA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 GGAAGAAAACATGGAAGAATCCTGGCACTGTCTTTTTGGATTATCATATTTATGAAGAAGATATTAATATTTCC 3552
Query 1 ---------------------------------------------ATGAAGTCCATGTCACAGCTTGCAGTTTT 29
|||||||||||||||||||||||..|.||
Sbjct 3553 AGCAACTGGGAAGTTTTCCTGGAAGTTCTTGATGGTGTGGAGAAGATGAAGTCCATGTCACAGCTTGCCATCTT 3626
Query 30 GTCAAGACGGTGGAAGCCTTCAGAGATGAAGTTGGATCCCTTCCAGGAGGTTGTATTGGAAAGCAGTAGTGTGG 103
..|||||||.||||.||||.||||||||||||||||.||||||||||||.||||.||||||||||.||||||.|
Sbjct 3627 AACAAGACGCTGGAGGCCTGCAGAGATGAAGTTGGACCCCTTCCAGGAGCTTGTGTTGGAAAGCAATAGTGTTG 3700
Query 104 ACGAATTGCGAGAGAAGCTTAGTGAAATCAGTGGGATTCCTTTGGATGATATTGAATTTGCTAAGGGTAGAGGA 177
|.|||.|.|||||||||||.||||||||||||||||||||||||||.||.|||||||||||.||||||||.|||
Sbjct 3701 ATGAACTCCGAGAGAAGCTAAGTGAAATCAGTGGGATTCCTTTGGAAGACATTGAATTTGCCAAGGGTAGGGGA 3774
Query 178 ACATTTCCCTGTGATATTTCTGTCCTTGATATTCATCAAGATTTAGACTGGAATCCTAAAGTTTCTACCCTGAA 251
||.||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.|||||||||||
Sbjct 3775 ACCTTCCCCTGTGATATTTCTGTCCTTGATATTCATCAAGATTTGGACTGGAATCCTAAAGTCTCTACCCTGAA 3848
Query 252 TGTCTGGCCTCTTTATATCTGTGATGATGGTGCGGTCATATTTTATAGGGATAAAACAGAAGAATTAATGGAAT 325
|||.|||||||||||||||||||||||||||||.|||||||||||||||||||.||||||||||.|.|||||||
Sbjct 3849 TGTTTGGCCTCTTTATATCTGTGATGATGGTGCCGTCATATTTTATAGGGATAGAACAGAAGAAGTGATGGAAT 3922
Query 326 TGACAGATGAGCAAAGAAATGAACTGATGAAAAAAGAAAGCAGTCGACTCCAGAAGACTGGACATCGTGTAACA 399
|||||||||||||||||||||||.||||||||||.||||||||.|||||.||||||||.|||||||||||.|||
Sbjct 3923 TGACAGATGAGCAAAGAAATGAATTGATGAAAAAGGAAAGCAGCCGACTGCAGAAGACGGGACATCGTGTGACA 3996
Query 400 TACTCACCTCGTAAAGAGAAAGCACTAAAAATATATCTGGATGGAGCACCAAATAAAGATCTGACTCAAGAC 471
|||||.|||||.||||||||||||||.||.||.||.||||||||.||.||||||||||||.||.||||||||
Sbjct 3997 TACTCCCCTCGCAAAGAGAAAGCACTCAAGATCTACCTGGATGGGGCGCCAAATAAAGATGTGGCTCAAGAC 4068
