Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12140
- Subject:
- NM_177249.3
- Aligned Length:
- 4128
- Identities:
- 425
- Gaps:
- 3657
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGTGCCCGGCGAGGAGAACCAACTGGTCCCGAAGGAGGATGTGTTTTGGAGATGCAGACAAAATATCTTTGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGAAATGAAGAAGAAATTTTTACAGATAGAAAATGCTGCTGAAGAACCTAGAGTCTTATGTATAATACAAGACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTACTAACTCGAAGACAGTGAGTGAACGGATCACATTAAATTTACCAGCATCTACCCCAGTCCGAAAGCTCTTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAAGATGTGGCCAACAAAGTAGGCTACATAAATGGAACCTTTGATTTGACCAGGGAAAATGGAGTCACTACTGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGACATGGCACCACTGGATCACACCAGTGACAAGTCTCTTCTTGATGCTAATTTTGAGCCAGGAAAGAAGAACT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTCTGCATTTGACAGATAAAGATGGTGAACCGCCTCAGATGTTGTTGGAGGACTCCAATAACGTGGATGACAGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTGCATGACAGGTTCATAGGTCCACTGCCAAGAGAAGGTTCTGTGGCCTCTACCAATGATTATGTCAGCCAGAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTACTCCTATTCATCAATTTTGAACAAGTCAGAAACTGGTTATGTGGGATTAGTAAACCAGGCGATGACGTGCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATTTGAATAGCCTTTTGCAAACACTTTTTATGACTCCTGAATTTAGGAATGCATTATATAAGTGGGAATTTGAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GACTCTGAAGAAGATCCTGTAACGAGTATCCCATACCAGCTTCAAAGGCTTTTTGTTTTGTTACAAACCAGCAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAAGAGAGCAATTGAGACCACAGATGTTACAAGGAGCTTTGGATGGGATAGCAGTGAGGCTTGGCAACAGCATG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATGTACAAGAACTGTGCCGTGTTATGTTTGATGCTTTGGAACAGAAATGGAAGCAAACAGAACAGGCTGATCTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATAAATGAGCTGTACCAAGGCAAGCTGAAAGATTATGTGAGGTGTCTGGAATGCGGTTATGAAGGCTGGAGAAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGACACGTATCTTGATATTCCACTGGTCATCCGACCTTATGGGTCCAGCCAAGCGTTTGCTAGTGTGGAAGAAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CGTTGCATGCATTTATTCAACCAGAGATCTTGGATGGCCCAAATCAATATTTTTGTGAACGTTGTAAGAAGAAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGTGATGCTCGGAAGGGCCTTCGGTTTTTGCATTTCCCCTATCTGCTGACCTTACAGTTGAAAAGGTTTGATTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGATTATACAACCATGCATAGAATTAAACTGAATGATCGAATGTCATTTCCGGAGGAGCTGGATATGAGCACAT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTATTGATATTGAAGATGAGAAATCTCCTCAGACTGAAAGTTGCACTGATAGTGGAGCAGAAAATGAAGGCAGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGCCACAGCGACCAGATGAGTAATGATTTCTCCACGGATGATGCTGTTGATGAAGGGATATGCCTGGAGAGCAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TAGTGGGAGTGAGAAGATTTCAAAACCTGGCCTGGAAAAGAACTCCCTGATGTATGAGCTCTTCTCAGTGATGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGCATTCAGGGAGTGCTGCTGGAGGACACTATTATGCTTGCATAAAGTCTTTCAGTGACGATCAATGGTACAGT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTCAATGACCAACATGTGAGCAGGATAACACAAGAAGACATTAAGAAGACACATGGTGGGTCTTCAGGAAGCAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGGCTACTACTCCAGTGCTTTTGCAAGCTCAACAAATGCATATATGCTGATATACAGACTGAAGGATCCAACAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GAAATGCAAAGTTTCTAGAAGTGGACGAGTACCCAGAACACATTAAGAATCTGGTGCAGAAGGAGAGAGAGCTG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GAAGAGCAGGAAAAGAGGCAACGAGAGATTGAACGCAACACGTGCAAGATAAAATTATTTTGTTTGCATCCTGT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GAAACAAGTAATGATGGAAAACAAGCTGGAGGTTCATAAGGATAAGACGCTAAAGGAAGCCGTTGAAATGGCTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATAAGATGATGGATTTAGAAGATGTGATTCCCTTGGATTGCTGTCGCCTGGTAAAATATGACGAGTTTCATGAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TACCTGGAACGATCGTATGAGGGAGAAGAAGATACACCAATGGGGTTGCTTCTAGGAGGAGTCAAGTCCACATA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CATGTTTGATCTGCTGTTGGAAACGAGAAAGCCTGATCAAATTTTTCAGTCTTACAAACCTGGAGAAGTGATGG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGAAAGTTCATGTTGTTGATCTGAAAGCAGAGACTGTCGCTGCTCCTGTAACAGTGCGTGCGTATTTAAATCAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ACAGTTACAGAGTTTAAACAGCTGATCTCAAAGGCCACGCACTTACCTGCAGACTCCATGAGGATAGTGCTGGA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GCGCTGCTACAATGACCTGCGCCTTCTCAGCATGCCCAGCAAGACCCTGAAGGCTGAGGGCTTCTTCAGAAGTA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ACAAGGTGTTTGTTGAAAGCTCTGAGACAGTGGATCACCAGGCAGCCTTTACAGACTCCCACTTGTGGAAACTC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CTGGATCGACATGCAAATACAATCCGGTTATTTGTTTTGCTGCCTGAACAATCTCCAGGATCATATTCGAAAAG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GACAGCATACCAGAAAGCTGGAGGTGATTCTGGTAATGTGGACGATGATTGTGAAAGAGTCAAAGGACCTGCAG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GGAATTTAAAGTCTGTGGATGCTATTCTAGAAGAGAGCACTGAAAAACTGAAAAGCTTGTCACTGCAGCAGCAG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CAGCAAGATGGGGACAACGGAGACAGCAGCAAAAGCACTGAGACAAGTGACTTTGAAAATATTGAATCCCCTCT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CAATGAGAGGGGCTCTTCCACCTCTGTGGATAATCGAGAACTTGAACAGCACATTCAGACTTCTGACCCAGAAA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ACTTTCAGTCTGAGGAACGCTCGGACTCAGATGTGAATAATGACCGGAGTACAAGTTCGGTAGACAGTGATATT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CTTAGCTCCAGTCACAGCAGTGACACTTTGTGCAATGCAGACAGCGCTCAGATTCCTCTGGCCAATGGACTTGA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CTCTCACAGTATCACAAGTAGTAGAAGAACTAAAGCAAACGAGGGGAAAAAGGAGACCTGGGACACAGCTGAAG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AAGACTCTGGGACTGACAGTGAATATGACGAGAGTGGCAAGAGCAGGGGGGACATGCAGTACATGTACTTCAAA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GCTGACCCCTACACTGCGGATGAAGGCTCTGGGGAAGGACACAAATGGTTGATGGTGCATGTTGATAAGAGAAT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CACCCTGGCAGCTTTCAAACAGCATTTAGAACCTTTTGTTGGAGTCCTCTCCTCTCACTTCAAGGTTTTTCGAG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TGTACACCAGCAATCAAGAGTTTGAGACCGTCCGGTTGAATGAGACCCTTTCATCATTTTCAGATGACAATAAG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 ATCACAATCCGACTGGGGAGAGCACTGAAGAAGGGAGAGTACAGAGTTAAAGTGTGCCAGCTCTTAGTCAATGA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GCAAGAGCCATGCAAGTTTCTGCTAGACGCTGTGTTTGCTAAAGGCATGACTGTGCGGCAATCAAAAGAGGAGC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TGATTCCTCAACTCAGGGAGCAGTGTGGCTTAGACCTCAGCATCGACAGGTTTCGTCTAAGGAAGAAAACATGG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 AAGAATCCTGGCACTGTCTTTTTGGATTATCATATTTATGAAGAAGATATTAATATTTCCAGCAACTGGGAAGT 3626
Query 1 -------------------------------ATGAAGTCCATGTCACAGCTTGCAGTTTTGTCAAGACGGTGGA 43
|||||||||||||||||||||||..|.||..|||||||.||||
Sbjct 3627 TTTCCTGGAAGTTCTTGATGGTGTGGAGAAGATGAAGTCCATGTCACAGCTTGCCATCTTAACAAGACGCTGGA 3700
Query 44 AGCCTTCAGAGATGAAGTTGGATCCCTTCCAGGAGGTTGTATTGGAAAGCAGTAGTGTGGACGAATTGCGAGAG 117
.||||.||||||||||||||||.||||||||||||.||||.||||||||||.||||||.||.|||.|.||||||
Sbjct 3701 GGCCTGCAGAGATGAAGTTGGACCCCTTCCAGGAGCTTGTGTTGGAAAGCAATAGTGTTGATGAACTCCGAGAG 3774
Query 118 AAGCTTAGTGAAATCAGTGGGATTCCTTTGGATGATATTGAATTTGCTAAGGGTAGAGGAACATTTCCCTGTGA 191
|||||.||||||||||||||||||||||||||.||.|||||||||||.||||||||.|||||.||.||||||||
Sbjct 3775 AAGCTAAGTGAAATCAGTGGGATTCCTTTGGAAGACATTGAATTTGCCAAGGGTAGGGGAACCTTCCCCTGTGA 3848
Query 192 TATTTCTGTCCTTGATATTCATCAAGATTTAGACTGGAATCCTAAAGTTTCTACCCTGAATGTCTGGCCTCTTT 265
||||||||||||||||||||||||||||||.|||||||||||||||||.||||||||||||||.||||||||||
Sbjct 3849 TATTTCTGTCCTTGATATTCATCAAGATTTGGACTGGAATCCTAAAGTCTCTACCCTGAATGTTTGGCCTCTTT 3922
Query 266 ATATCTGTGATGATGGTGCGGTCATATTTTATAGGGATAAAACAGAAGAATTAATGGAATTGACAGATGAGCAA 339
|||||||||||||||||||.|||||||||||||||||||.||||||||||.|.|||||||||||||||||||||
Sbjct 3923 ATATCTGTGATGATGGTGCCGTCATATTTTATAGGGATAGAACAGAAGAAGTGATGGAATTGACAGATGAGCAA 3996
Query 340 AGAAATGAACTGATGAAAAAAGAAAGCAGTCGACTCCAGAAGACTGGACATCGTGTAACATACTCACCTCGTAA 413
|||||||||.||||||||||.||||||||.|||||.||||||||.|||||||||||.||||||||.|||||.||
Sbjct 3997 AGAAATGAATTGATGAAAAAGGAAAGCAGCCGACTGCAGAAGACGGGACATCGTGTGACATACTCCCCTCGCAA 4070
Query 414 AGAGAAAGCACTAAAAATATATCTGGATGGAGCACCAAATAAAGATCTGACTCAAGAC 471
||||||||||||.||.||.||.||||||||.||.||||||||||||.||.||||||||
Sbjct 4071 AGAGAAAGCACTCAAGATCTACCTGGATGGGGCGCCAAATAAAGATGTGGCTCAAGAC 4128
