Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12142
- Subject:
- XM_011524965.3
- Aligned Length:
- 2184
- Identities:
- 1387
- Gaps:
- 774
Alignment
Query 1 ATGGCGGAACCGGGCGGCGCGGCGGGCCGGTCCCATCCGGAAGATGGATCGGCTTCTGAGGGAGAGAAGGAAGG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGGAACCGGGCGGCGCGGCGGGCCGGTCCCATCCGGAAGATGGATCGGCTTCTGAGGGAGAGAAGGAAGG 74
Query 75 GAATAATGAAAGCCACATGGTGTCACCACCAGAGAAGGATGATGGCCAGAAAGGTGAAGAAGCTGTCGGTAGCA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GAATAATGAAAGCCACATGGTGTCACCACCAGAGAAGGATGATGGCCAGAAAGGTGAAGAAGCTGTCGGTAGCA 148
Query 149 CAGAGCATCCTGAGGAAGTCACAACCCAAGCGGAAGCTGCAATTGAAGAGGGGGAGGTCGAGACAGAAGGGGAA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 149 CAGAGCATCCTGAGGAAGTCACAACCCAAGCGGAAGCTGCAATTGAAGAGGGGGAGGTGGAGACAGAAGGGGAA 222
Query 223 GCAGCAGTGGAAGGGGAAGAGGAGGCTGTGTCCTATGGAGATGCTGAAAGCGAAGAGGAATATTACTATACAGA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GCAGCAGTGGAAGGGGAAGAGGAGGCTGTGTCCTATGGAGATGCTGAAAGCGAAGAGGAATATTACTATACAGA 296
Query 297 AACTTCATCCCCGGAAGGGCAAATCAGTGCTGCAGATACGACTTACCCGTATTTCAGTCCTCCTCAGGAACTGC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AACTTCATCCCCGGAAGGGCAAATCAGTGCTGCAGATACGACTTACCCGTATTTCAGTCCTCCTCAGGAACTGC 370
Query 371 CTGGAGAGGAGGCATACGATAGTGTTAGCGGGGAGGCTGGTCTCCAAGGCTTCCAGCAAGAGGCCACCGGTCCA 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTGGAGAGGAGGCATACGATAGTGTTAGCGGGGAGGCTGGTCTCCAAGGCTTCCAGCAAGAGGCCACCGGTCCA 444
Query 445 CCAGAATCCAGAGAAAGGAGGGTCACCTCCCCAGAGCCATCCCACGGAGTCTTAGGCCCGTCGGAGCAAATGGG 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCAGAATCCAGAGAAAGGAGGGTCACCTCCCCAGAGCCATCCCACGGAGTCTTAGGCCCGTCGGAGCAAATGGG 518
Query 519 CCAGGTCACCTCTGGGCCAGCAGTGGGCAGATTGACAGGATCCACAGAGGAGCCCCAGGGGCAGGTGCTCCCAA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCAGGTCACCTCTGGGCCAGCAGTGGGCAGATTGACAGGATCCACAGAGGAGCCCCAGGGGCAGGTGCTCCCAA 592
Query 593 TGGGCGTCCAGCACCGCTTCCGGCTGAGCCACGGGAGCGACATCGAGTCCTCAGACCTGGAGGAGTTCGTCTCG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGGGCGTCCAGCACCGCTTCCGGCTGAGCCACGGGAGCGACATCGAGTCCTCAGACCTGGAGGAGTTCGTCTCG 666
Query 667 CAGGAGCCAGTGATCCCCCCAGGGGTGCCCGATGCCCACCCCAGGGAAGGAGACCTGCCAGTGTTCCAGGACCA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CAGGAGCCAGTGATCCCCCCAGGGGTGCCCGATGCCCACCCCAGGGAAGGAGACCTGCCAGTGTTCCAGGACCA 740
Query 741 GATCCAGCAGCCCAGCACCGAGGAGGGGGCCATGGCAGAGAGAGTGGAGTCCGAGGGGAGTGACGAGGAAGCAG 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GATCCAGCAGCCCAGCACCGAGGAGGGGGCCATGGCAGAGAGAGTGGAGTCCGAGGGGAGTGACGAGGAAGCAG 814
Query 815 AAGACGAAGGGTCCCAGCTGGTGGTTTTGGACCCAGACCACCCCCTGATGGTAAGATTTCAGGCTGCCCTGAAG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 815 AAGACGAAGGGTCCCAGCTGGTGGTTTTGGACCCAGACCACCCCCTGATGGTAAGATTCCAGGCTGCCCTGAAG 888
Query 889 AACTACCTGAACCGACAGATCGAAAAGTTGAAGCTGGACCTCCAAGAGCTGGTTGTGGCTACCAAGCAGAGCCG 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AACTACCTGAACCGACAGATCGAAAAGTTGAAGCTGGACCTCCAAGAGCTGGTTGTGGCTACCAAGCAGAGCCG 962
Query 963 AGCCCAGCGGCAGGAGCTGGGGGTGAATCTCTATGAGGTGCAGCAGCACCTGGTACACCTGCAGAAGCTGCTGG 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AGCCCAGCGGCAGGAGCTGGGGGTGAATCTCTATGAGGTGCAGCAGCACCTGGTACACCTGCAGAAGCTGCTGG 1036
Query 1037 AGAAGAGTCACGACCGCCACGCAATGGCCTCGAGCGAGCGCAGGCAGAAGGAGGAGGAGCTGCAGGCCGCCCGC 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGAAGAGTCACGACCGCCACGCAATGGCCTCGAGCGAGCGCAGGCAGAAGGAGGAGGAGCTGCAGGCCGCCCGC 1110
Query 1111 GCTCTCTACACCAAGACCTGCGCAGCCGCCAACGAGGAGCGCAAAAAGTTGGCGGCTCTGCAGACTGAGATGGA 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GCTCTCTACACCAAGACCTGCGCAGCCGCCAACGAGGAGCGCAAAAAGTTGGCGGCTCTGCAGACTGAGATGGA 1184
Query 1185 GAACTTGGCCCTGCATCTCTTCTACATGCAGAACATCGACCAGGACATGCGTGACGACATCCGCGTGATGACAC 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GAACTTGGCCCTGCATCTCTTCTACATGCAGAACATCGACCAGGACATGCGTGACGACATCCGCGTGATGACAC 1258
Query 1259 AAGTGGTAAAGAAGGCCGAGACGGAGAGGATCCGGGCAGAAATCGAGAAGAAAAAGCAGGGCGT-----TGGA- 1326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|.| ||||
Sbjct 1259 AAGTGGTAAAGAAGGCCGAGACGGAGAGGATCCGGGCAGAAATCGAGAAGAAAAAGCAGGACCTGTATGTGGAC 1332
Query 1327 -------------GA-CACAGGTGCTG--------------CCT---------TCATTCCTAAAACCACCCAGG 1363
|| |.|||...||| ||| |||.|.|| ...||||.|
Sbjct 1333 CAGCTCACCACTCGAGCCCAGCAACTGGAAGAAGACATTGCCCTGTTTGAGGCTCAGTACT----TGGCCCAAG 1402
Query 1364 GTGACCAGGTCTCGGGACGCGGA----AAGAAAAAGCCGGGCACTGTG-GTGGCACGTGTCT-CACC------- 1424
.|| |||.| ||.|||| |||.||| |||.||.| |.||| || ||||
Sbjct 1403 CTG---AGGAC-----ACCCGGATTTTAAGGAAA------GCAGTGAGTGAGGC------CTGCACCGAGATCG 1456
Query 1425 -CGC--TGAGCTT------------------------------------------------------------- 1434
||| |.|||.|
Sbjct 1457 ACGCCATCAGCGTGGAGAAGAGGCGCATCATGCAGCAATGGGCCAGCAGCCTGGTGGGCATGAAGCACCGCGAC 1530
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 1531 GAGGCGCACAGGGCGGTGCTGGAGGCGCTCAGAGGATGCCAGCATCAAGCCAAATCCACCGACGGCGAGATTGA 1604
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 1605 GGCCTATAAGAAATCCATCATGAAGGAGGAAGAAAAGAACGAGAAGCTGGCGAGCATCCTGAACCGGACAGAGA 1678
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 1679 CGGAAGCCACACTGCTGCAGAAGCTCACCACCCAGTGCCTGACCAAGCAGGTGGCCCTGCAGAGCCAGTTCAAT 1752
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 1753 ACCTACAGGCTCACCCTGCAGGACACAGAGGATGCCCTCAGCCAGGACCAGCTGGAACAAATGATACTCACGGA 1826
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 1827 GGAGTTGCAGGCCATCCGCCAAGCCATCCAGGGCGAGCTGGAGCTCAGGAGGAAGACGGATGCTGCCATCCGGG 1900
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 1901 AGAAGCTGCAGGAGCACATGACCTCCAACAAGACCACCAAATACTTCAACCAGCTCATCCTGAGGCTGCAGAAG 1974
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 1975 GAGAAGACCAACATGTTTCCAGAAGAGGGCAGCAAAGAGTCTTGGACCAACACATTCGTCTATTACGACAATTT 2048
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 2049 TCCAACCGATGCCAGTCCAGCTGCTGAAAAGAGTACCCCCGACACGATGTTTGAACTGCTCAAAGCCTCATGGG 2122
Query 1435 -------------------------------------- 1434
Sbjct 2123 CTGATAGAAGAGCAGCTTTGGCCACACCATTGCAGCTG 2160
